RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 ZC2HC1AQ96GY0 325 aa9.01□□□□□ -0.97
ABCF1-205ENST00000475993 OR4F4Q96R69 305 aa9.01□□□□□ -0.97
ABCF1-205ENST00000475993 SAMD10Q9BYL1 202 aa9.01□□□□□ -0.97
ABCF1-205ENST00000475993 PSG11Q9UQ72 335 aa9.01□□□□□ -0.97
ABCF1-205ENST00000475993 IGHV1-69-2A0A0G2JMI3 117 aa9.01□□□□□ -0.97
ABCF1-205ENST00000475993 LIPT2A6NK58 231 aa9.01□□□□□ -0.97
ABCF1-205ENST00000475993 SH2D1BO14796 132 aa9.01□□□□□ -0.97
ABCF1-205ENST00000475993 SPRY1O43609 319 aaPredicted RBP9.01□□□□□ -0.97
ABCF1-205ENST00000475993 SERF1AO75920 110 aa9.01□□□□□ -0.97
ABCF1-205ENST00000475993 TESK1Q15569 626 aa9.01□□□□□ -0.97
ABCF1-205ENST00000475993 MSMO1Q15800 293 aa9.01□□□□□ -0.97
ABCF1-205ENST00000475993 SPIN3Q5JUX0 258 aa9.01□□□□□ -0.97
ABCF1-205ENST00000475993 FFAR4Q5NUL3 377 aa9.01□□□□□ -0.97
ABCF1-205ENST00000475993 SFTPA2Q8IWL1 248 aa9.01□□□□□ -0.97
ABCF1-205ENST00000475993 OR5D13Q8NGL4 314 aa9.01□□□□□ -0.97
ABCF1-205ENST00000475993 WDR61Q9GZS3 305 aaKnown RBP9.01□□□□□ -0.97
ABCF1-205ENST00000475993 IGHG1P01857 330 aa9□□□□□ -0.97
ABCF1-205ENST00000475993 S100GP29377 79 aa9□□□□□ -0.97
ABCF1-205ENST00000475993 MPLP40238 635 aa9□□□□□ -0.97
ABCF1-205ENST00000475993 CKS1BP61024 79 aa9□□□□□ -0.97
ABCF1-205ENST00000475993 DLX2Q07687 328 aaPredicted RBP9□□□□□ -0.97
ABCF1-205ENST00000475993 ASCL4Q6XD76 172 aa9□□□□□ -0.97
ABCF1-205ENST00000475993 TCF23Q7RTU1 214 aa9□□□□□ -0.97
ABCF1-205ENST00000475993 HAPLN4Q86UW8 402 aa9□□□□□ -0.97
ABCF1-205ENST00000475993 GAPTQ8N292 157 aa9□□□□□ -0.97
ABCF1-205ENST00000475993 FAM131CQ96AQ9 280 aa9□□□□□ -0.97
ABCF1-205ENST00000475993 GPHA2Q96T91 129 aa9□□□□□ -0.97
ABCF1-205ENST00000475993 ALKBH4Q9NXW9 302 aa9□□□□□ -0.97
ABCF1-205ENST00000475993 A0A0G2JRQ6 117 aa9□□□□□ -0.97
ABCF1-205ENST00000475993 IGLC7A0M8Q6 106 aa9□□□□□ -0.97
ABCF1-205ENST00000475993 SLC25A6P12236 298 aa9□□□□□ -0.97
ABCF1-205ENST00000475993 HNRNPA2B1P22626 353 aaKnown RBP9□□□□□ -0.97
ABCF1-205ENST00000475993 ZNF83P51522 516 aa9□□□□□ -0.97
ABCF1-205ENST00000475993 HTD2P86397 168 aa9□□□□□ -0.97
ABCF1-205ENST00000475993 PIGYQ3MUY2 71 aa9□□□□□ -0.97
ABCF1-205ENST00000475993 TMEM211Q6ICI0 200 aa9□□□□□ -0.97
ABCF1-205ENST00000475993 PNPLA5Q7Z6Z6 429 aaPredicted RBP9□□□□□ -0.97
ABCF1-205ENST00000475993 OR8I2Q8N0Y5 310 aa9□□□□□ -0.97
ABCF1-205ENST00000475993 OR2Y1Q8NGV0 311 aa9□□□□□ -0.97
ABCF1-205ENST00000475993 POM121L2Q96KW2 1035 aa9□□□□□ -0.97
ABCF1-205ENST00000475993 MRPS16Q9Y3D3 137 aaKnown RBP9□□□□□ -0.97
ABCF1-205ENST00000475993 RNF114Q9Y508 228 aa9□□□□□ -0.97
ABCF1-205ENST00000475993 UNC80Q8N2C7 3258 aa9□□□□□ -0.97
ABCF1-205ENST00000475993 IGKV1-27A0A075B6S5 117 aa8.99□□□□□ -0.97
ABCF1-205ENST00000475993 ZNF776Q68DI1 518 aaPredicted RBP8.99□□□□□ -0.97
ABCF1-205ENST00000475993 GATAD1Q8WUU5 269 aa8.99□□□□□ -0.97
ABCF1-205ENST00000475993 ST8SIA1Q92185 356 aa8.99□□□□□ -0.97
ABCF1-205ENST00000475993 SPSB1Q96BD6 273 aa8.99□□□□□ -0.97
ABCF1-205ENST00000475993 NEIL1Q96FI4 390 aaPredicted RBP8.99□□□□□ -0.97
ABCF1-205ENST00000475993 RBM24Q9BX46 236 aaKnown RBP8.99□□□□□ -0.97
ABCF1-205ENST00000475993 WNT10AQ9GZT5 417 aa8.99□□□□□ -0.97
ABCF1-205ENST00000475993 MRPL27Q9P0M9 148 aaKnown RBP8.99□□□□□ -0.97
ABCF1-205ENST00000475993 FBXL7Q9UJT9 491 aa8.99□□□□□ -0.97
ABCF1-205ENST00000475993 NCOA6Q14686 2063 aaPredicted RBP8.99□□□□□ -0.97
ABCF1-205ENST00000475993 TAX1BP3O14907 124 aa8.99□□□□□ -0.97
ABCF1-205ENST00000475993 RAMP3O60896 148 aa8.99□□□□□ -0.97
ABCF1-205ENST00000475993 POU2F2P09086 479 aa8.99□□□□□ -0.97
ABCF1-205ENST00000475993 NPPCP23582 126 aa8.99□□□□□ -0.97
ABCF1-205ENST00000475993 HLA-DQA1Q5Y7H0 255 aa8.99□□□□□ -0.97
ABCF1-205ENST00000475993 FAM71F2Q6NXP2 309 aa8.99□□□□□ -0.97
ABCF1-205ENST00000475993 ATOH7Q8N100 152 aa8.99□□□□□ -0.97
ABCF1-205ENST00000475993 ZDHHC11Q9H8X9 412 aa8.99□□□□□ -0.97
ABCF1-205ENST00000475993 H0Y980 276 aa8.98□□□□□ -0.97
ABCF1-205ENST00000475993 TMPRSS2O15393 492 aa8.98□□□□□ -0.97
ABCF1-205ENST00000475993 PDCD6O75340 191 aa8.98□□□□□ -0.97
ABCF1-205ENST00000475993 TIAF1O95411 115 aa8.98□□□□□ -0.97
ABCF1-205ENST00000475993 LINC00271P0C7V0 271 aa8.98□□□□□ -0.97
ABCF1-205ENST00000475993 MSR1P21757 451 aa8.98□□□□□ -0.97
ABCF1-205ENST00000475993 RPS18P62269 152 aaKnown RBP8.98□□□□□ -0.97
ABCF1-205ENST00000475993 HBG1P69891 147 aa8.98□□□□□ -0.97
ABCF1-205ENST00000475993 HBG2P69892 147 aa8.98□□□□□ -0.97
ABCF1-205ENST00000475993 MRPL43Q8N983 215 aaKnown RBP8.98□□□□□ -0.97
ABCF1-205ENST00000475993 OR1B1Q8NGR6 318 aa8.98□□□□□ -0.97
ABCF1-205ENST00000475993 TAF15Q92804 592 aaKnown RBP eCLIP8.98□□□□□ -0.97
ABCF1-205ENST00000475993 MMP17Q9ULZ9 603 aa8.98□□□□□ -0.97
ABCF1-205ENST00000475993 TIMM9Q9Y5J7 89 aa8.98□□□□□ -0.97
ABCF1-205ENST00000475993 RTTNQ86VV8 2226 aa8.98□□□□□ -0.97
ABCF1-205ENST00000475993 CTXND1A0A1B0GTU2 59 aa8.98□□□□□ -0.97
ABCF1-205ENST00000475993 C1QTNF9BB2RNN3 333 aa8.98□□□□□ -0.97
ABCF1-205ENST00000475993 F5H5K5 113 aa8.98□□□□□ -0.97
ABCF1-205ENST00000475993 TLX3O43711 291 aaPredicted RBP8.98□□□□□ -0.97
ABCF1-205ENST00000475993 TRAF3IP2O43734 574 aaPredicted RBP8.98□□□□□ -0.97
ABCF1-205ENST00000475993 CRISP2P16562 243 aa8.98□□□□□ -0.97
ABCF1-205ENST00000475993 HIST3H3Q16695 136 aa8.98□□□□□ -0.97
ABCF1-205ENST00000475993 RSPO1Q2MKA7 263 aaPredicted RBP8.98□□□□□ -0.97
ABCF1-205ENST00000475993 CARD17Q5XLA6 110 aa8.98□□□□□ -0.97
ABCF1-205ENST00000475993 OSR2Q8N2R0 312 aa8.98□□□□□ -0.97
ABCF1-205ENST00000475993 KLHDC1Q8N7A1 406 aa8.98□□□□□ -0.97
ABCF1-205ENST00000475993 C5orf17Q8NAS9 161 aa8.98□□□□□ -0.97
ABCF1-205ENST00000475993 OR1K1Q8NGR3 316 aa8.98□□□□□ -0.97
ABCF1-205ENST00000475993 SGMS2Q8NHU3 365 aa8.98□□□□□ -0.97
ABCF1-205ENST00000475993 SLC37A2Q8TED4 501 aa8.98□□□□□ -0.97
ABCF1-205ENST00000475993 OR4C12Q96R67 309 aa8.98□□□□□ -0.97
ABCF1-205ENST00000475993 CDC42EP3Q9UKI2 254 aa8.98□□□□□ -0.97
ABCF1-205ENST00000475993 IGKV3D-11A0A0A0MRZ8 115 aa8.98□□□□□ -0.97
ABCF1-205ENST00000475993 IGKV1D-13A0A0B4J2D9 117 aa8.98□□□□□ -0.97
ABCF1-205ENST00000475993 IGKV1-12A0A0C4DH73 117 aa8.98□□□□□ -0.97
ABCF1-205ENST00000475993 SLC22A20A6NK97 555 aa8.98□□□□□ -0.97
ABCF1-205ENST00000475993 IGKV1D-12P01611 117 aa8.98□□□□□ -0.97
ABCF1-205ENST00000475993 HNRNPA1P09651 372 aaKnown RBP eCLIP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms