RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 GLDNQ6ZMI3 551 aaPredicted RBP5.44□□□□□ -1.54
HDAC3-207ENST00000475549 TMEM91Q6ZNR0 172 aa5.44□□□□□ -1.54
HDAC3-207ENST00000475549 CEACAM19Q7Z692 300 aa5.44□□□□□ -1.54
HDAC3-207ENST00000475549 C8orf59Q8N0T1 100 aaPredicted RBP5.44□□□□□ -1.54
HDAC3-207ENST00000475549 OR5M8Q8NGP6 311 aa5.44□□□□□ -1.54
HDAC3-207ENST00000475549 NRG4Q8WWG1 115 aa5.44□□□□□ -1.54
HDAC3-207ENST00000475549 DPF1Q92782 380 aa5.44□□□□□ -1.54
HDAC3-207ENST00000475549 GALMQ96C23 342 aa5.44□□□□□ -1.54
HDAC3-207ENST00000475549 WWC2-AS2Q96NR7 200 aa5.44□□□□□ -1.54
HDAC3-207ENST00000475549 HDHD3Q9BSH5 251 aaPredicted RBP5.44□□□□□ -1.54
HDAC3-207ENST00000475549 TMED9Q9BVK6 235 aa5.44□□□□□ -1.54
HDAC3-207ENST00000475549 TM2D1Q9BX74 207 aa5.44□□□□□ -1.54
HDAC3-207ENST00000475549 C8orf4Q9NR00 106 aa5.44□□□□□ -1.54
HDAC3-207ENST00000475549 KCNIP1Q9NZI2 227 aa5.44□□□□□ -1.54
HDAC3-207ENST00000475549 GHRLQ9UBU3 117 aa5.44□□□□□ -1.54
HDAC3-207ENST00000475549 NKX1-2Q9UD57 310 aaPredicted RBP5.44□□□□□ -1.54
HDAC3-207ENST00000475549 GAB2Q9UQC2 676 aa5.44□□□□□ -1.54
HDAC3-207ENST00000475549 STAB2Q8WWQ8 2551 aa5.44□□□□□ -1.54
HDAC3-207ENST00000475549 TRAV41A0A0B4J266 112 aa5.43□□□□□ -1.54
HDAC3-207ENST00000475549 IGKV1-6A0A0C4DH72 117 aa5.43□□□□□ -1.54
HDAC3-207ENST00000475549 H0YJW9 148 aa5.43□□□□□ -1.54
HDAC3-207ENST00000475549 SOCS1O15524 211 aa5.43□□□□□ -1.54
HDAC3-207ENST00000475549 UCHL1P09936 223 aa5.43□□□□□ -1.54
HDAC3-207ENST00000475549 MAPK3P27361 379 aaPredicted RBP5.43□□□□□ -1.54
HDAC3-207ENST00000475549 TMEM50BP56557 158 aa5.43□□□□□ -1.54
HDAC3-207ENST00000475549 CX3CL1P78423 397 aa5.43□□□□□ -1.54
HDAC3-207ENST00000475549 RUNX1Q01196 453 aa5.43□□□□□ -1.54
HDAC3-207ENST00000475549 GABPB1Q06547 395 aaPredicted RBP5.43□□□□□ -1.54
HDAC3-207ENST00000475549 PLA2G7Q13093 441 aa5.43□□□□□ -1.54
HDAC3-207ENST00000475549 SPHARQ15513 63 aa5.43□□□□□ -1.54
HDAC3-207ENST00000475549 PLAC9Q5JTB6 97 aa5.43□□□□□ -1.54
HDAC3-207ENST00000475549 C9orf66Q5T8R8 295 aa5.43□□□□□ -1.54
HDAC3-207ENST00000475549 FAM89BQ8N5H3 189 aa5.43□□□□□ -1.54
HDAC3-207ENST00000475549 MS4A15Q8N5U1 240 aa5.43□□□□□ -1.54
HDAC3-207ENST00000475549 DRAXINQ8NBI3 349 aaPredicted RBP5.43□□□□□ -1.54
HDAC3-207ENST00000475549 KCNG3Q8TAE7 436 aa5.43□□□□□ -1.54
HDAC3-207ENST00000475549 IL1F10Q8WWZ1 152 aa5.43□□□□□ -1.54
HDAC3-207ENST00000475549 PHYHIPQ92561 330 aa5.43□□□□□ -1.54
HDAC3-207ENST00000475549 DCUN1D4Q92564 292 aa5.43□□□□□ -1.54
HDAC3-207ENST00000475549 DLX4Q92988 240 aaPredicted RBP5.43□□□□□ -1.54
HDAC3-207ENST00000475549 TMEM203Q969S6 136 aa5.43□□□□□ -1.54
HDAC3-207ENST00000475549 ABHD14BQ96IU4 210 aa5.43□□□□□ -1.54
HDAC3-207ENST00000475549 NEDD4LQ96PU5 975 aa5.43□□□□□ -1.54
HDAC3-207ENST00000475549 ASCL2Q99929 193 aa5.43□□□□□ -1.54
HDAC3-207ENST00000475549 CHCHD6Q9BRQ6 235 aa5.43□□□□□ -1.54
HDAC3-207ENST00000475549 CST11Q9H112 138 aa5.43□□□□□ -1.54
HDAC3-207ENST00000475549 LPAR5Q9H1C0 372 aa5.43□□□□□ -1.54
HDAC3-207ENST00000475549 FBXL15Q9H469 300 aa5.43□□□□□ -1.54
HDAC3-207ENST00000475549 RAB9BQ9NP90 201 aa5.43□□□□□ -1.54
HDAC3-207ENST00000475549 PARP11Q9NR21 331 aa5.43□□□□□ -1.54
HDAC3-207ENST00000475549 OR1A1Q9P1Q5 309 aa5.43□□□□□ -1.54
HDAC3-207ENST00000475549 SLC23A1Q9UHI7 598 aa5.43□□□□□ -1.54
HDAC3-207ENST00000475549 AK3Q9UIJ7 227 aa5.43□□□□□ -1.54
HDAC3-207ENST00000475549 VSIG4Q9Y279 399 aa5.43□□□□□ -1.54
HDAC3-207ENST00000475549 ERGIC3Q9Y282 383 aa5.43□□□□□ -1.54
HDAC3-207ENST00000475549 NUBP2Q9Y5Y2 271 aa5.43□□□□□ -1.54
HDAC3-207ENST00000475549 U3KQK5 164 aa5.43□□□□□ -1.54
HDAC3-207ENST00000475549 TRBV6-6A0A0A6YYG2 114 aa5.42□□□□□ -1.54
HDAC3-207ENST00000475549 J3QL48 77 aa5.42□□□□□ -1.54
HDAC3-207ENST00000475549 RRHO14718 337 aa5.42□□□□□ -1.54
HDAC3-207ENST00000475549 IGKV1-16P04430 117 aa5.42□□□□□ -1.54
HDAC3-207ENST00000475549 SCTP09683 121 aa5.42□□□□□ -1.54
HDAC3-207ENST00000475549 OR8U8P0C7N1 319 aa5.42□□□□□ -1.54
HDAC3-207ENST00000475549 NHLRC4P0CG21 123 aaPredicted RBP5.42□□□□□ -1.54
HDAC3-207ENST00000475549 UBBP0CG47 229 aa5.42□□□□□ -1.54
HDAC3-207ENST00000475549 CEACAM6P40199 344 aa5.42□□□□□ -1.54
HDAC3-207ENST00000475549 CRIP2P52943 208 aaPredicted RBP5.42□□□□□ -1.54
HDAC3-207ENST00000475549 SLURP1P55000 103 aa5.42□□□□□ -1.54
HDAC3-207ENST00000475549 SSBP2P81877 361 aaPredicted RBP5.42□□□□□ -1.54
HDAC3-207ENST00000475549 ZNF616Q08AN1 781 aa5.42□□□□□ -1.54
HDAC3-207ENST00000475549 P2RY14Q15391 338 aa5.42□□□□□ -1.54
HDAC3-207ENST00000475549 RBM48Q5RL73 367 aaKnown RBP5.42□□□□□ -1.54
HDAC3-207ENST00000475549 LIPKQ5VXJ0 399 aa5.42□□□□□ -1.54
HDAC3-207ENST00000475549 GLT8D1Q68CQ7 371 aa5.42□□□□□ -1.54
HDAC3-207ENST00000475549 TMEM65Q6PI78 240 aa5.42□□□□□ -1.54
HDAC3-207ENST00000475549 FAM131AQ6UXB0 335 aa5.42□□□□□ -1.54
HDAC3-207ENST00000475549 SBSPONQ8IVN8 264 aa5.42□□□□□ -1.54
HDAC3-207ENST00000475549 OR2AK2Q8NG84 335 aa5.42□□□□□ -1.54
HDAC3-207ENST00000475549 OR5AN1Q8NGI8 311 aa5.42□□□□□ -1.54
HDAC3-207ENST00000475549 FAM103A1Q9BTL3 118 aaKnown RBP5.42□□□□□ -1.54
HDAC3-207ENST00000475549 TMEM59Q9BXS4 323 aa5.42□□□□□ -1.54
HDAC3-207ENST00000475549 TOLLIPQ9H0E2 274 aa5.42□□□□□ -1.54
HDAC3-207ENST00000475549 C11orf54Q9H0W9 315 aaPredicted RBP5.42□□□□□ -1.54
HDAC3-207ENST00000475549 DUSP21Q9H596 190 aa5.42□□□□□ -1.54
HDAC3-207ENST00000475549 PLEKHJ1Q9NW61 149 aa5.42□□□□□ -1.54
HDAC3-207ENST00000475549 RNF150Q9ULK6 438 aa5.42□□□□□ -1.54
HDAC3-207ENST00000475549 ZNF256Q9Y2P7 627 aaPredicted RBP5.42□□□□□ -1.54
HDAC3-207ENST00000475549 KCNK7Q9Y2U2 307 aa5.42□□□□□ -1.54
HDAC3-207ENST00000475549 LRRC42Q9Y546 428 aa5.42□□□□□ -1.54
HDAC3-207ENST00000475549 IGHV4OR15-8A0A075B7B6 117 aa5.41□□□□□ -1.54
HDAC3-207ENST00000475549 A0A087WW49 117 aa5.41□□□□□ -1.54
HDAC3-207ENST00000475549 A0A1W2PN81 502 aa5.41□□□□□ -1.54
HDAC3-207ENST00000475549 ITGB1BP1O14713 200 aa5.41□□□□□ -1.54
HDAC3-207ENST00000475549 RAB29O14966 203 aa5.41□□□□□ -1.54
HDAC3-207ENST00000475549 ARPC1BO15143 372 aaKnown RBP5.41□□□□□ -1.54
HDAC3-207ENST00000475549 LDLRAD4O15165 306 aa5.41□□□□□ -1.54
HDAC3-207ENST00000475549 RGS11O94810 467 aa5.41□□□□□ -1.54
HDAC3-207ENST00000475549 BPNT1O95861 308 aa5.41□□□□□ -1.54
HDAC3-207ENST00000475549 CD3GP09693 182 aa5.41□□□□□ -1.54
HDAC3-207ENST00000475549 OR5H8P0DN80 308 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms