RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 IGSF11Q5DX21 431 aa12.74□□□□□ -0.37
CPSF3-203ENST00000475482 Q6ZPA2 131 aa12.74□□□□□ -0.37
CPSF3-203ENST00000475482 LDLRAD3Q86YD5 345 aa12.74□□□□□ -0.37
CPSF3-203ENST00000475482 ZDHHC16Q969W1 377 aa12.74□□□□□ -0.37
CPSF3-203ENST00000475482 KIRREL1Q96J84 757 aa12.74□□□□□ -0.37
CPSF3-203ENST00000475482 C14orf166Q9Y224 244 aaKnown RBP12.74□□□□□ -0.37
CPSF3-203ENST00000475482 MMP24Q9Y5R2 645 aa12.74□□□□□ -0.37
CPSF3-203ENST00000475482 TRRAPQ9Y4A5 3859 aa12.74□□□□□ -0.37
CPSF3-203ENST00000475482 TRBV6-7A0A0A0MS04 114 aa12.73□□□□□ -0.37
CPSF3-203ENST00000475482 hADV38S2A0JD32 116 aa12.73□□□□□ -0.37
CPSF3-203ENST00000475482 C7orf66A4D0T2 115 aa12.73□□□□□ -0.37
CPSF3-203ENST00000475482 SNRPGP15A8MWD9 76 aa12.73□□□□□ -0.37
CPSF3-203ENST00000475482 RNASEK-C17orf49H0YIS7 233 aa12.73□□□□□ -0.37
CPSF3-203ENST00000475482 M0R1W7 72 aa12.73□□□□□ -0.37
CPSF3-203ENST00000475482 NDUFB7P17568 137 aa12.73□□□□□ -0.37
CPSF3-203ENST00000475482 ZBTB25P24278 435 aa12.73□□□□□ -0.37
CPSF3-203ENST00000475482 UCP3P55916 312 aa12.73□□□□□ -0.37
CPSF3-203ENST00000475482 TMEM30BQ3MIR4 351 aa12.73□□□□□ -0.37
CPSF3-203ENST00000475482 ZNF660Q6AZW8 331 aaPredicted RBP12.73□□□□□ -0.37
CPSF3-203ENST00000475482 GLDNQ6ZMI3 551 aaPredicted RBP12.73□□□□□ -0.37
CPSF3-203ENST00000475482 TMED4Q7Z7H5 227 aa12.73□□□□□ -0.37
CPSF3-203ENST00000475482 SGMS2Q8NHU3 365 aa12.73□□□□□ -0.37
CPSF3-203ENST00000475482 MARCH1Q8TCQ1 289 aa12.73□□□□□ -0.37
CPSF3-203ENST00000475482 IL1F10Q8WWZ1 152 aa12.73□□□□□ -0.37
CPSF3-203ENST00000475482 MOB3AQ96BX8 217 aa12.73□□□□□ -0.37
CPSF3-203ENST00000475482 ONECUT1Q9UBC0 465 aa12.73□□□□□ -0.37
CPSF3-203ENST00000475482 GPR132Q9UNW8 380 aa12.73□□□□□ -0.37
CPSF3-203ENST00000475482 FLVCR2Q9UPI3 526 aa12.73□□□□□ -0.37
CPSF3-203ENST00000475482 ALG5Q9Y673 324 aa12.73□□□□□ -0.37
CPSF3-203ENST00000475482 PKD1L1Q8TDX9 2849 aa12.73□□□□□ -0.37
CPSF3-203ENST00000475482 TRBV23-1A0A0A0MS06 115 aa12.72□□□□□ -0.37
CPSF3-203ENST00000475482 A0A0U1RQK1 487 aa12.72□□□□□ -0.37
CPSF3-203ENST00000475482 CREBL2O60519 120 aaPredicted RBP12.72□□□□□ -0.37
CPSF3-203ENST00000475482 PPYP01298 95 aa12.72□□□□□ -0.37
CPSF3-203ENST00000475482 TRAPPC2P0DI81 140 aa12.72□□□□□ -0.37
CPSF3-203ENST00000475482 TRAPPC2BP0DI82 140 aa12.72□□□□□ -0.37
CPSF3-203ENST00000475482 ZNF728P0DKX0 622 aa12.72□□□□□ -0.37
CPSF3-203ENST00000475482 S100GP29377 79 aa12.72□□□□□ -0.37
CPSF3-203ENST00000475482 RPL15P61313 204 aaKnown RBP12.72□□□□□ -0.37
CPSF3-203ENST00000475482 HTD2P86397 168 aa12.72□□□□□ -0.37
CPSF3-203ENST00000475482 C4orf46Q504U0 113 aa12.72□□□□□ -0.37
CPSF3-203ENST00000475482 AADACL3Q5VUY0 350 aa12.72□□□□□ -0.37
CPSF3-203ENST00000475482 SHISA2Q6UWI4 295 aa12.72□□□□□ -0.37
CPSF3-203ENST00000475482 SLC38A6Q8IZM9 456 aa12.72□□□□□ -0.37
CPSF3-203ENST00000475482 CADM3Q8N126 398 aa12.72□□□□□ -0.37
CPSF3-203ENST00000475482 PRR18Q8N4B5 295 aa12.72□□□□□ -0.37
CPSF3-203ENST00000475482 MRGPRDQ8TDS7 321 aa12.72□□□□□ -0.37
CPSF3-203ENST00000475482 CHAC2Q8WUX2 184 aa12.72□□□□□ -0.37
CPSF3-203ENST00000475482 SSMEM1Q8WWF3 244 aa12.72□□□□□ -0.37
CPSF3-203ENST00000475482 TAF15Q92804 592 aaKnown RBP eCLIP12.72□□□□□ -0.37
CPSF3-203ENST00000475482 ARL11Q969Q4 196 aa12.72□□□□□ -0.37
CPSF3-203ENST00000475482 ZNF486Q96H40 463 aaPredicted RBP12.72□□□□□ -0.37
CPSF3-203ENST00000475482 CHIAQ9BZP6 476 aa12.72□□□□□ -0.37
CPSF3-203ENST00000475482 SIRT7Q9NRC8 400 aa12.72□□□□□ -0.37
CPSF3-203ENST00000475482 UBE2J1Q9Y385 318 aaPredicted RBP12.72□□□□□ -0.37
CPSF3-203ENST00000475482 FAM181BA6NEQ2 426 aa12.71□□□□□ -0.37
CPSF3-203ENST00000475482 OR5H14A6NHG9 310 aa12.71□□□□□ -0.37
CPSF3-203ENST00000475482 ZNF729A6NN14 1252 aaPredicted RBP12.71□□□□□ -0.37
CPSF3-203ENST00000475482 C12orf77C9JDV5 145 aa12.71□□□□□ -0.37
CPSF3-203ENST00000475482 HBZP02008 142 aa12.71□□□□□ -0.37
CPSF3-203ENST00000475482 CTSDP07339 412 aaPredicted RBP12.71□□□□□ -0.37
CPSF3-203ENST00000475482 ANXA7P20073 488 aaKnown RBP12.71□□□□□ -0.37
CPSF3-203ENST00000475482 IER3P46695 156 aa12.71□□□□□ -0.37
CPSF3-203ENST00000475482 RELBQ01201 579 aa12.71□□□□□ -0.37
CPSF3-203ENST00000475482 CBX3Q13185 183 aa12.71□□□□□ -0.37
CPSF3-203ENST00000475482 ABCA11PQ4W5N1 156 aa12.71□□□□□ -0.37
CPSF3-203ENST00000475482 SLC25A42Q86VD7 318 aa12.71□□□□□ -0.37
CPSF3-203ENST00000475482 OR13A1Q8NGR1 328 aa12.71□□□□□ -0.37
CPSF3-203ENST00000475482 H1FXQ92522 213 aaKnown RBP12.71□□□□□ -0.37
CPSF3-203ENST00000475482 CORO2AQ92828 525 aa12.71□□□□□ -0.37
CPSF3-203ENST00000475482 PPP1R14BQ96C90 147 aa12.71□□□□□ -0.37
CPSF3-203ENST00000475482 MED28Q9H204 178 aa12.71□□□□□ -0.37
CPSF3-203ENST00000475482 OR51J1Q9H342 316 aa12.71□□□□□ -0.37
CPSF3-203ENST00000475482 GAL3ST2Q9H3Q3 398 aa12.71□□□□□ -0.37
CPSF3-203ENST00000475482 TAS2R3Q9NYW6 316 aa12.71□□□□□ -0.37
CPSF3-203ENST00000475482 VSIG4Q9Y279 399 aa12.71□□□□□ -0.37
CPSF3-203ENST00000475482 OR2W1Q9Y3N9 320 aa12.71□□□□□ -0.37
CPSF3-203ENST00000475482 LINC00312Q9Y6C7 94 aa12.71□□□□□ -0.37
CPSF3-203ENST00000475482 HMX3A6NHT5 357 aa12.7□□□□□ -0.38
CPSF3-203ENST00000475482 TUSC2O75896 110 aa12.7□□□□□ -0.38
CPSF3-203ENST00000475482 RGS11O94810 467 aa12.7□□□□□ -0.38
CPSF3-203ENST00000475482 NDUFA7O95182 113 aa12.7□□□□□ -0.38
CPSF3-203ENST00000475482 OR4E1P0C645 316 aa12.7□□□□□ -0.38
CPSF3-203ENST00000475482 AADACP22760 399 aa12.7□□□□□ -0.38
CPSF3-203ENST00000475482 NFYAP23511 347 aaPredicted RBP12.7□□□□□ -0.38
CPSF3-203ENST00000475482 FXYD4P59646 89 aa12.7□□□□□ -0.38
CPSF3-203ENST00000475482 HERPUD1Q15011 391 aa12.7□□□□□ -0.38
CPSF3-203ENST00000475482 TMEM128Q5BJH2 165 aa12.7□□□□□ -0.38
CPSF3-203ENST00000475482 HCP5Q6MZN7 132 aa12.7□□□□□ -0.38
CPSF3-203ENST00000475482 PDZD9Q8IXQ8 264 aa12.7□□□□□ -0.38
CPSF3-203ENST00000475482 H1FOOQ8IZA3 346 aaPredicted RBP12.7□□□□□ -0.38
CPSF3-203ENST00000475482 FAM185AQ8N0U4 392 aa12.7□□□□□ -0.38
CPSF3-203ENST00000475482 C11orf42Q8N5U0 333 aa12.7□□□□□ -0.38
CPSF3-203ENST00000475482 TPRX1Q8N7U7 411 aa12.7□□□□□ -0.38
CPSF3-203ENST00000475482 CCDC71LQ8N9Z2 235 aa12.7□□□□□ -0.38
CPSF3-203ENST00000475482 TOMM40LQ969M1 308 aa12.7□□□□□ -0.38
CPSF3-203ENST00000475482 GHITMQ9H3K2 345 aa12.7□□□□□ -0.38
CPSF3-203ENST00000475482 METTL8Q9H825 291 aaKnown RBP12.7□□□□□ -0.38
CPSF3-203ENST00000475482 C1RLQ9NZP8 487 aa12.7□□□□□ -0.38
CPSF3-203ENST00000475482 TRAV39A0A0B4J263 110 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms