RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 MSMO1Q15800 293 aa12.79□□□□□ -0.36
RPUSD3-215ENST00000475470 CR1LQ2VPA4 569 aa12.79□□□□□ -0.36
RPUSD3-215ENST00000475470 MARC2Q969Z3 335 aa12.79□□□□□ -0.36
RPUSD3-215ENST00000475470 OR6C3Q9NZP0 311 aa12.79□□□□□ -0.36
RPUSD3-215ENST00000475470 TLN1Q9Y490 2541 aaKnown RBP12.79□□□□□ -0.36
RPUSD3-215ENST00000475470 SIGLEC5O15389 551 aa12.79□□□□□ -0.36
RPUSD3-215ENST00000475470 ST8SIA5O15466 376 aa12.79□□□□□ -0.36
RPUSD3-215ENST00000475470 SELLP14151 372 aa12.79□□□□□ -0.36
RPUSD3-215ENST00000475470 ASCL1P50553 236 aa12.79□□□□□ -0.36
RPUSD3-215ENST00000475470 TAGLNQ01995 201 aaKnown RBP12.79□□□□□ -0.36
RPUSD3-215ENST00000475470 OR2B11Q5JQS5 317 aa12.79□□□□□ -0.36
RPUSD3-215ENST00000475470 STUMQ69YW2 141 aa12.79□□□□□ -0.36
RPUSD3-215ENST00000475470 BTNL3Q6UXE8 466 aa12.79□□□□□ -0.36
RPUSD3-215ENST00000475470 Q6ZRM9 215 aa12.79□□□□□ -0.36
RPUSD3-215ENST00000475470 TMEM252Q8N6L7 170 aa12.79□□□□□ -0.36
RPUSD3-215ENST00000475470 TCTEX1D2Q8WW35 142 aa12.79□□□□□ -0.36
RPUSD3-215ENST00000475470 EDARADDQ8WWZ3 215 aa12.79□□□□□ -0.36
RPUSD3-215ENST00000475470 C14orf79Q96F83 325 aa12.79□□□□□ -0.36
RPUSD3-215ENST00000475470 SDSLQ96GA7 329 aa12.79□□□□□ -0.36
RPUSD3-215ENST00000475470 C5orf30Q96GV9 206 aa12.79□□□□□ -0.36
RPUSD3-215ENST00000475470 JPT1Q9UK76 154 aa12.79□□□□□ -0.36
RPUSD3-215ENST00000475470 OMGP23515 440 aa12.78□□□□□ -0.36
RPUSD3-215ENST00000475470 RPL30P62888 115 aaKnown RBP12.78□□□□□ -0.36
RPUSD3-215ENST00000475470 TLE1Q04724 770 aa12.78□□□□□ -0.36
RPUSD3-215ENST00000475470 EIF4EBP1Q13541 118 aaPredicted RBP12.78□□□□□ -0.36
RPUSD3-215ENST00000475470 ZCCHC24Q8N2G6 241 aaKnown RBP12.78□□□□□ -0.36
RPUSD3-215ENST00000475470 FGFRL1Q8N441 504 aa12.78□□□□□ -0.36
RPUSD3-215ENST00000475470 SAT2Q96F10 170 aaPredicted RBP12.78□□□□□ -0.36
RPUSD3-215ENST00000475470 RNF115Q9Y4L5 304 aa12.78□□□□□ -0.36
RPUSD3-215ENST00000475470 IGF2RP11717 2491 aa12.78□□□□□ -0.36
RPUSD3-215ENST00000475470 LRRC30A6NM36 301 aa12.78□□□□□ -0.36
RPUSD3-215ENST00000475470 CCL21O00585 134 aa12.78□□□□□ -0.36
RPUSD3-215ENST00000475470 NUPL2O15504 423 aaKnown RBP12.78□□□□□ -0.36
RPUSD3-215ENST00000475470 MED6O75586 246 aa12.78□□□□□ -0.36
RPUSD3-215ENST00000475470 CLDN1O95832 211 aa12.78□□□□□ -0.36
RPUSD3-215ENST00000475470 GYPAP02724 150 aa12.78□□□□□ -0.36
RPUSD3-215ENST00000475470 CD55P08174 381 aa12.78□□□□□ -0.36
RPUSD3-215ENST00000475470 MUC1P15941 1255 aaPredicted RBP12.78□□□□□ -0.36
RPUSD3-215ENST00000475470 SULT1A2P50226 295 aa12.78□□□□□ -0.36
RPUSD3-215ENST00000475470 TGIF2LYQ8IUE0 185 aa12.78□□□□□ -0.36
RPUSD3-215ENST00000475470 ST6GALNAC3Q8NDV1 305 aa12.78□□□□□ -0.36
RPUSD3-215ENST00000475470 PLPPR2Q96GM1 343 aa12.78□□□□□ -0.36
RPUSD3-215ENST00000475470 ARV1Q9H2C2 271 aa12.78□□□□□ -0.36
RPUSD3-215ENST00000475470 ZNF665Q9H7R5 613 aa12.78□□□□□ -0.36
RPUSD3-215ENST00000475470 DYSFO75923 2080 aa12.77□□□□□ -0.36
RPUSD3-215ENST00000475470 RAMP3O60896 148 aa12.77□□□□□ -0.37
RPUSD3-215ENST00000475470 TMEM50AO95807 157 aa12.77□□□□□ -0.37
RPUSD3-215ENST00000475470 Q3ZCU0 254 aa12.77□□□□□ -0.37
RPUSD3-215ENST00000475470 MORN2Q502X0 79 aa12.77□□□□□ -0.37
RPUSD3-215ENST00000475470 GAFA1Q96PS6 74 aa12.77□□□□□ -0.37
RPUSD3-215ENST00000475470 CCL13Q99616 98 aa12.77□□□□□ -0.37
RPUSD3-215ENST00000475470 EGLN1Q9GZT9 426 aa12.77□□□□□ -0.37
RPUSD3-215ENST00000475470 NCOR1P1Q9H4R4 102 aa12.77□□□□□ -0.37
RPUSD3-215ENST00000475470 KIAA1324LA8MWY0 1029 aaPredicted RBP12.77□□□□□ -0.37
RPUSD3-215ENST00000475470 GPR12P47775 334 aa12.77□□□□□ -0.37
RPUSD3-215ENST00000475470 ZNF816Q0VGE8 651 aaPredicted RBP12.77□□□□□ -0.37
RPUSD3-215ENST00000475470 CLINT1Q14677 625 aa12.77□□□□□ -0.37
RPUSD3-215ENST00000475470 NCMAPQ5T1S8 102 aa12.77□□□□□ -0.37
RPUSD3-215ENST00000475470 DUX4L9Q6RFH8 374 aaPredicted RBP12.77□□□□□ -0.37
RPUSD3-215ENST00000475470 ZNF66Q6ZN08 573 aa12.77□□□□□ -0.37
RPUSD3-215ENST00000475470 SPAG16Q8N0X2 631 aa12.77□□□□□ -0.37
RPUSD3-215ENST00000475470 SMIM8Q96KF7 97 aa12.77□□□□□ -0.37
RPUSD3-215ENST00000475470 RAB40CQ96S21 281 aa12.77□□□□□ -0.37
RPUSD3-215ENST00000475470 HSD17B10Q99714 261 aaKnown RBP12.77□□□□□ -0.37
RPUSD3-215ENST00000475470 GINS3Q9BRX5 216 aa12.77□□□□□ -0.37
RPUSD3-215ENST00000475470 AGMATQ9BSE5 352 aa12.77□□□□□ -0.37
RPUSD3-215ENST00000475470 DCAF16Q9NXF7 216 aa12.77□□□□□ -0.37
RPUSD3-215ENST00000475470 CALYQ9NYX4 217 aa12.77□□□□□ -0.37
RPUSD3-215ENST00000475470 MMP24Q9Y5R2 645 aa12.77□□□□□ -0.37
RPUSD3-215ENST00000475470 DSCAMO60469 2012 aa12.77□□□□□ -0.37
RPUSD3-215ENST00000475470 RAB19A4D1S5 217 aa12.76□□□□□ -0.37
RPUSD3-215ENST00000475470 FAM90A27PA6NNH2 459 aa12.76□□□□□ -0.37
RPUSD3-215ENST00000475470 F2RL2O00254 374 aa12.76□□□□□ -0.37
RPUSD3-215ENST00000475470 YPEL1O60688 119 aa12.76□□□□□ -0.37
RPUSD3-215ENST00000475470 RPL23AP62750 156 aaKnown RBP12.76□□□□□ -0.37
RPUSD3-215ENST00000475470 TEX36Q5VZQ5 186 aa12.76□□□□□ -0.37
RPUSD3-215ENST00000475470 ZNF788Q6ZQV5 615 aa12.76□□□□□ -0.37
RPUSD3-215ENST00000475470 YPEL2Q96QA6 119 aa12.76□□□□□ -0.37
RPUSD3-215ENST00000475470 FAM234AQ9H0X4 552 aa12.76□□□□□ -0.37
RPUSD3-215ENST00000475470 SAP30LQ9HAJ7 183 aa12.76□□□□□ -0.37
RPUSD3-215ENST00000475470 RAB9BQ9NP90 201 aa12.76□□□□□ -0.37
RPUSD3-215ENST00000475470 FAM212BQ9NTI7 297 aaPredicted RBP12.76□□□□□ -0.37
RPUSD3-215ENST00000475470 C17orf98A8MV24 154 aa12.76□□□□□ -0.37
RPUSD3-215ENST00000475470 SHISA9B4DS77 424 aa12.76□□□□□ -0.37
RPUSD3-215ENST00000475470 CST7O76096 145 aa12.76□□□□□ -0.37
RPUSD3-215ENST00000475470 ATG12O94817 140 aa12.76□□□□□ -0.37
RPUSD3-215ENST00000475470 KRASP01116 189 aa12.76□□□□□ -0.37
RPUSD3-215ENST00000475470 SEC11BP0C7V7 166 aa12.76□□□□□ -0.37
RPUSD3-215ENST00000475470 C1QTNF9P0C862 333 aa12.76□□□□□ -0.37
RPUSD3-215ENST00000475470 CHRNB4P30926 498 aa12.76□□□□□ -0.37
RPUSD3-215ENST00000475470 PAX9P55771 341 aa12.76□□□□□ -0.37
RPUSD3-215ENST00000475470 BLOC1S1P78537 153 aa12.76□□□□□ -0.37
RPUSD3-215ENST00000475470 BAXQ07812 192 aa12.76□□□□□ -0.37
RPUSD3-215ENST00000475470 ZNF266Q14584 549 aa12.76□□□□□ -0.37
RPUSD3-215ENST00000475470 SWI5Q1ZZU3 235 aa12.76□□□□□ -0.37
RPUSD3-215ENST00000475470 TCTEX1D1Q8N7M0 179 aa12.76□□□□□ -0.37
RPUSD3-215ENST00000475470 HSD17B11Q8NBQ5 300 aa12.76□□□□□ -0.37
RPUSD3-215ENST00000475470 HRH4Q9H3N8 390 aa12.76□□□□□ -0.37
RPUSD3-215ENST00000475470 TRGV10A0A0A0MS01 117 aa12.75□□□□□ -0.37
RPUSD3-215ENST00000475470 NUDT19A8MXV4 375 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms