RNA–Protein interactions for RNA: ENST00000474929.1

USP54-211, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 590 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-211ENST00000474929 SULT1B1O43704 296 aa5.81□□□□□ -1.48
USP54-211ENST00000474929 CA1P00915 261 aaPredicted RBP5.81□□□□□ -1.48
USP54-211ENST00000474929 GSTP1P09211 210 aaKnown RBP5.81□□□□□ -1.48
USP54-211ENST00000474929 CALCBP10092 127 aa5.81□□□□□ -1.48
USP54-211ENST00000474929 OR3A3P47888 321 aa5.81□□□□□ -1.48
USP54-211ENST00000474929 IL13RA2Q14627 380 aa5.81□□□□□ -1.48
USP54-211ENST00000474929 FXYD3Q14802 87 aa5.81□□□□□ -1.48
USP54-211ENST00000474929 ODF3L2Q3SX64 289 aa5.81□□□□□ -1.48
USP54-211ENST00000474929 FAM98BQ52LJ0 330 aaKnown RBP5.81□□□□□ -1.48
USP54-211ENST00000474929 LCE2AQ5TA79 106 aaPredicted RBP5.81□□□□□ -1.48
USP54-211ENST00000474929 LAMTOR1Q6IAA8 161 aa5.81□□□□□ -1.48
USP54-211ENST00000474929 TRAT1Q6PIZ9 186 aa5.81□□□□□ -1.48
USP54-211ENST00000474929 RASSF6Q6ZTQ3 369 aa5.81□□□□□ -1.48
USP54-211ENST00000474929 C15orf53Q8NAA6 179 aa5.81□□□□□ -1.48
USP54-211ENST00000474929 UXS1Q8NBZ7 420 aa5.81□□□□□ -1.48
USP54-211ENST00000474929 SETD9Q8NE22 299 aa5.81□□□□□ -1.48
USP54-211ENST00000474929 OR5T1Q8NG75 326 aa5.81□□□□□ -1.48
USP54-211ENST00000474929 KCNG3Q8TAE7 436 aa5.81□□□□□ -1.48
USP54-211ENST00000474929 OTULINQ96BN8 352 aa5.81□□□□□ -1.48
USP54-211ENST00000474929 SLC7A6OSQ96CW6 309 aaPredicted RBP5.81□□□□□ -1.48
USP54-211ENST00000474929 TSNAXQ99598 290 aaKnown RBP5.81□□□□□ -1.48
USP54-211ENST00000474929 BTBD10Q9BSF8 475 aa5.81□□□□□ -1.48
USP54-211ENST00000474929 ABHD14AQ9BUJ0 271 aa5.81□□□□□ -1.48
USP54-211ENST00000474929 YIPF3Q9GZM5 350 aa5.81□□□□□ -1.48
USP54-211ENST00000474929 C5orf66Q9H5L9 145 aa5.81□□□□□ -1.48
USP54-211ENST00000474929 PGPEP1Q9NXJ5 209 aa5.81□□□□□ -1.48
USP54-211ENST00000474929 METTL1Q9UBP6 276 aaKnown RBP5.81□□□□□ -1.48
USP54-211ENST00000474929 UBQLN2Q9UHD9 624 aa5.81□□□□□ -1.48
USP54-211ENST00000474929 IKZF2Q9UKS7 526 aa5.81□□□□□ -1.48
USP54-211ENST00000474929 GAB2Q9UQC2 676 aa5.81□□□□□ -1.48
USP54-211ENST00000474929 SNX5Q9Y5X3 404 aa5.81□□□□□ -1.48
USP54-211ENST00000474929 AGRNO00468 2067 aa5.81□□□□□ -1.48
USP54-211ENST00000474929 IGHV4-28A0A0C4DH34 117 aa5.8□□□□□ -1.48
USP54-211ENST00000474929 A0A1B0GTI1 187 aa5.8□□□□□ -1.48
USP54-211ENST00000474929 TMEM213A2RRL7 107 aa5.8□□□□□ -1.48
USP54-211ENST00000474929 A6NIN4 97 aa5.8□□□□□ -1.48
USP54-211ENST00000474929 C15orf65H3BRN8 121 aa5.8□□□□□ -1.48
USP54-211ENST00000474929 SYT7O43581 403 aa5.8□□□□□ -1.48
USP54-211ENST00000474929 SELENOFO60613 162 aa5.8□□□□□ -1.48
USP54-211ENST00000474929 KRT36O76013 467 aa5.8□□□□□ -1.48
USP54-211ENST00000474929 GASTP01350 101 aa5.8□□□□□ -1.48
USP54-211ENST00000474929 XGP55808 180 aa5.8□□□□□ -1.48
USP54-211ENST00000474929 ATP5G2Q06055 141 aa5.8□□□□□ -1.48
USP54-211ENST00000474929 CT45A1Q5HYN5 189 aa5.8□□□□□ -1.48
USP54-211ENST00000474929 TTC32Q5I0X7 151 aa5.8□□□□□ -1.48
USP54-211ENST00000474929 SLC35D3Q5M8T2 416 aa5.8□□□□□ -1.48
USP54-211ENST00000474929 C6orf183Q5T699 404 aa5.8□□□□□ -1.48
USP54-211ENST00000474929 SPATA24Q86W54 205 aa5.8□□□□□ -1.48
USP54-211ENST00000474929 OR9Q2Q8NGE9 314 aa5.8□□□□□ -1.48
USP54-211ENST00000474929 CT45A3Q8NHU0 189 aa5.8□□□□□ -1.48
USP54-211ENST00000474929 CNIH3Q8TBE1 160 aa5.8□□□□□ -1.48
USP54-211ENST00000474929 DEFB104AQ8WTQ1 72 aa5.8□□□□□ -1.48
USP54-211ENST00000474929 CANT1Q8WVQ1 401 aa5.8□□□□□ -1.48
USP54-211ENST00000474929 CPNE2Q96FN4 548 aaPredicted RBP5.8□□□□□ -1.48
USP54-211ENST00000474929 OPALINQ96PE5 141 aa5.8□□□□□ -1.48
USP54-211ENST00000474929 ADI1Q9BV57 179 aa5.8□□□□□ -1.48
USP54-211ENST00000474929 TSSK6Q9BXA6 273 aa5.8□□□□□ -1.48
USP54-211ENST00000474929 MRPL27Q9P0M9 148 aaKnown RBP5.8□□□□□ -1.48
USP54-211ENST00000474929 ZNF230Q9UIE0 474 aaPredicted RBP5.8□□□□□ -1.48
USP54-211ENST00000474929 OR52A1Q9UKL2 312 aa5.8□□□□□ -1.48
USP54-211ENST00000474929 R4GMQ9 66 aa5.8□□□□□ -1.48
USP54-211ENST00000474929 IGHV3-43A0A0B4J1X8 118 aa5.79□□□□□ -1.48
USP54-211ENST00000474929 TEX48A0A1B0GUV7 120 aa5.79□□□□□ -1.48
USP54-211ENST00000474929 GNGT2O14610 69 aa5.79□□□□□ -1.48
USP54-211ENST00000474929 EREGO14944 169 aa5.79□□□□□ -1.48
USP54-211ENST00000474929 SLC31A2O15432 143 aa5.79□□□□□ -1.48
USP54-211ENST00000474929 MRPS14O60783 128 aaKnown RBP5.79□□□□□ -1.48
USP54-211ENST00000474929 CCNB2O95067 398 aa5.79□□□□□ -1.48
USP54-211ENST00000474929 CST1P01037 141 aa5.79□□□□□ -1.48
USP54-211ENST00000474929 PLA2G1BP04054 148 aaKnown RBP5.79□□□□□ -1.48
USP54-211ENST00000474929 IGHV3-43DP0DP04 118 aa5.79□□□□□ -1.48
USP54-211ENST00000474929 GALP22466 123 aa5.79□□□□□ -1.48
USP54-211ENST00000474929 HMGA2P52926 109 aa5.79□□□□□ -1.48
USP54-211ENST00000474929 KRTAP10-2P60368 255 aa5.79□□□□□ -1.48
USP54-211ENST00000474929 ICAM4Q14773 271 aa5.79□□□□□ -1.48
USP54-211ENST00000474929 CDK5R1Q15078 307 aa5.79□□□□□ -1.48
USP54-211ENST00000474929 DNAL1Q4LDG9 190 aa5.79□□□□□ -1.48
USP54-211ENST00000474929 OR2T5Q6IEZ7 315 aa5.79□□□□□ -1.48
USP54-211ENST00000474929 ZNF833PQ6ZTB9 187 aa5.79□□□□□ -1.48
USP54-211ENST00000474929 UTS2BQ765I0 119 aa5.79□□□□□ -1.48
USP54-211ENST00000474929 SERPINA12Q8IW75 414 aa5.79□□□□□ -1.48
USP54-211ENST00000474929 ADGRG5Q8IZF4 528 aa5.79□□□□□ -1.48
USP54-211ENST00000474929 STX19Q8N4C7 294 aa5.79□□□□□ -1.48
USP54-211ENST00000474929 AQP11Q8NBQ7 271 aa5.79□□□□□ -1.48
USP54-211ENST00000474929 OR2T29Q8NH02 315 aa5.79□□□□□ -1.48
USP54-211ENST00000474929 OR5B3Q8NH48 314 aa5.79□□□□□ -1.48
USP54-211ENST00000474929 OR1L1Q8NH94 360 aa5.79□□□□□ -1.48
USP54-211ENST00000474929 CACNG8Q8WXS5 425 aa5.79□□□□□ -1.48
USP54-211ENST00000474929 RITA1Q96K30 269 aa5.79□□□□□ -1.48
USP54-211ENST00000474929 CLCC1Q96S66 551 aa5.79□□□□□ -1.48
USP54-211ENST00000474929 ATG101Q9BSB4 218 aa5.79□□□□□ -1.48
USP54-211ENST00000474929 OR51V1Q9H2C8 321 aa5.79□□□□□ -1.48
USP54-211ENST00000474929 MAGIXQ9H6Y5 334 aa5.79□□□□□ -1.48
USP54-211ENST00000474929 REEP1Q9H902 201 aa5.79□□□□□ -1.48
USP54-211ENST00000474929 MDFICQ9P1T7 246 aa5.79□□□□□ -1.48
USP54-211ENST00000474929 POMPQ9Y244 141 aa5.79□□□□□ -1.48
USP54-211ENST00000474929 EXOSC1Q9Y3B2 195 aaKnown RBP5.79□□□□□ -1.48
USP54-211ENST00000474929 WASHC3Q9Y3C0 194 aa5.79□□□□□ -1.48
USP54-211ENST00000474929 SAMHD1Q9Y3Z3 626 aaKnown RBP5.79□□□□□ -1.48
USP54-211ENST00000474929 NACAE9PAV3 2078 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms