RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 NOL3O60936 208 aaKnown RBP13.56□□□□□ -0.24
SCAF11-206ENST00000474828 CD1BP29016 333 aa13.56□□□□□ -0.24
SCAF11-206ENST00000474828 FOXL1Q12952 345 aa13.56□□□□□ -0.24
SCAF11-206ENST00000474828 FBLN7Q53RD9 439 aa13.56□□□□□ -0.24
SCAF11-206ENST00000474828 H1FOOQ8IZA3 346 aaPredicted RBP13.56□□□□□ -0.24
SCAF11-206ENST00000474828 Q8N2B8 174 aa13.56□□□□□ -0.24
SCAF11-206ENST00000474828 Q8N6K4 173 aa13.56□□□□□ -0.24
SCAF11-206ENST00000474828 GPX8Q8TED1 209 aa13.56□□□□□ -0.24
SCAF11-206ENST00000474828 SNAPC3Q92966 411 aa13.56□□□□□ -0.24
SCAF11-206ENST00000474828 ST6GALNAC5Q9BVH7 336 aa13.56□□□□□ -0.24
SCAF11-206ENST00000474828 SCPEP1Q9HB40 452 aa13.56□□□□□ -0.24
SCAF11-206ENST00000474828 RDH8Q9NYR8 311 aa13.56□□□□□ -0.24
SCAF11-206ENST00000474828 RSL24D1Q9UHA3 163 aaKnown RBP13.56□□□□□ -0.24
SCAF11-206ENST00000474828 A3GALT2U3KPV4 340 aa13.56□□□□□ -0.24
SCAF11-206ENST00000474828 A0A1B0GUS0 222 aa13.55□□□□□ -0.24
SCAF11-206ENST00000474828 CTDSP2O14595 271 aa13.55□□□□□ -0.24
SCAF11-206ENST00000474828 RAB29O14966 203 aa13.55□□□□□ -0.24
SCAF11-206ENST00000474828 TUSC2O75896 110 aa13.55□□□□□ -0.24
SCAF11-206ENST00000474828 PTHLHP12272 177 aa13.55□□□□□ -0.24
SCAF11-206ENST00000474828 PLA1AQ53H76 456 aa13.55□□□□□ -0.24
SCAF11-206ENST00000474828 Q6ZSV7 163 aa13.55□□□□□ -0.24
SCAF11-206ENST00000474828 TGIF2LXQ8IUE1 241 aa13.55□□□□□ -0.24
SCAF11-206ENST00000474828 LYG1Q8N1E2 194 aa13.55□□□□□ -0.24
SCAF11-206ENST00000474828 DRAM1Q8N682 238 aa13.55□□□□□ -0.24
SCAF11-206ENST00000474828 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.55□□□□□ -0.24
SCAF11-206ENST00000474828 OR10J5Q8NHC4 309 aa13.55□□□□□ -0.24
SCAF11-206ENST00000474828 RBM14Q96PK6 669 aaKnown RBP13.55□□□□□ -0.24
SCAF11-206ENST00000474828 TNFRSF19Q9NS68 423 aa13.55□□□□□ -0.24
SCAF11-206ENST00000474828 SAA2-SAA4A0A096LPE2 208 aa13.54□□□□□ -0.24
SCAF11-206ENST00000474828 SULT1C2O00338 296 aa13.54□□□□□ -0.24
SCAF11-206ENST00000474828 HSPA12AO43301 675 aa13.54□□□□□ -0.24
SCAF11-206ENST00000474828 OR2F2O95006 317 aa13.54□□□□□ -0.24
SCAF11-206ENST00000474828 LPLP06858 475 aa13.54□□□□□ -0.24
SCAF11-206ENST00000474828 FAM106CPP0CH98 169 aa13.54□□□□□ -0.24
SCAF11-206ENST00000474828 SAA2P0DJI9 122 aaPredicted RBP13.54□□□□□ -0.24
SCAF11-206ENST00000474828 PRSS3P35030 304 aa13.54□□□□□ -0.24
SCAF11-206ENST00000474828 LY6EQ16553 131 aa13.54□□□□□ -0.24
SCAF11-206ENST00000474828 GVQW1Q8N7I0 195 aa13.54□□□□□ -0.24
SCAF11-206ENST00000474828 BEST4Q8NFU0 473 aa13.54□□□□□ -0.24
SCAF11-206ENST00000474828 OR56B4Q8NH76 319 aa13.54□□□□□ -0.24
SCAF11-206ENST00000474828 GCDHQ92947 438 aaPredicted RBP13.54□□□□□ -0.24
SCAF11-206ENST00000474828 NABP2Q9BQ15 211 aa13.54□□□□□ -0.24
SCAF11-206ENST00000474828 NDUFA13Q9P0J0 144 aa13.54□□□□□ -0.24
SCAF11-206ENST00000474828 ST8SIA5O15466 376 aa13.53□□□□□ -0.24
SCAF11-206ENST00000474828 AMY1AP04745 511 aa13.53□□□□□ -0.24
SCAF11-206ENST00000474828 AMY2AP04746 511 aa13.53□□□□□ -0.24
SCAF11-206ENST00000474828 RAG2P55895 527 aa13.53□□□□□ -0.24
SCAF11-206ENST00000474828 ACTG1P63261 375 aa13.53□□□□□ -0.24
SCAF11-206ENST00000474828 LSAMPQ13449 338 aa13.53□□□□□ -0.24
SCAF11-206ENST00000474828 AWAT1Q58HT5 328 aa13.53□□□□□ -0.24
SCAF11-206ENST00000474828 DHRS7BQ6IAN0 325 aaPredicted RBP13.53□□□□□ -0.24
SCAF11-206ENST00000474828 LAX1Q8IWV1 398 aa13.53□□□□□ -0.24
SCAF11-206ENST00000474828 DTX3Q8N9I9 347 aa13.53□□□□□ -0.24
SCAF11-206ENST00000474828 OR4F5Q8NH21 305 aa13.53□□□□□ -0.24
SCAF11-206ENST00000474828 SOSTQ9BQB4 213 aa13.53□□□□□ -0.24
SCAF11-206ENST00000474828 BET1O15155 118 aa13.52□□□□□ -0.25
SCAF11-206ENST00000474828 CRYBA1P05813 215 aa13.52□□□□□ -0.25
SCAF11-206ENST00000474828 SNRNP70P08621 437 aaKnown RBP13.52□□□□□ -0.25
SCAF11-206ENST00000474828 CD24P25063 80 aa13.52□□□□□ -0.25
SCAF11-206ENST00000474828 OR3A3P47888 321 aa13.52□□□□□ -0.25
SCAF11-206ENST00000474828 REG1BP48304 166 aa13.52□□□□□ -0.25
SCAF11-206ENST00000474828 TMEM219Q86XT9 240 aa13.52□□□□□ -0.25
SCAF11-206ENST00000474828 OR5AP2Q8NGF4 316 aa13.52□□□□□ -0.25
SCAF11-206ENST00000474828 LINC01006Q8NI28 216 aa13.52□□□□□ -0.25
SCAF11-206ENST00000474828 C15orf40Q8WUR7 153 aa13.52□□□□□ -0.25
SCAF11-206ENST00000474828 ABHD14BQ96IU4 210 aa13.52□□□□□ -0.25
SCAF11-206ENST00000474828 EAF1Q96JC9 268 aaPredicted RBP13.52□□□□□ -0.25
SCAF11-206ENST00000474828 ABHD1Q96SE0 405 aa13.52□□□□□ -0.25
SCAF11-206ENST00000474828 S1PR3Q99500 378 aa13.52□□□□□ -0.25
SCAF11-206ENST00000474828 NPFFR1Q9GZQ6 430 aa13.52□□□□□ -0.25
SCAF11-206ENST00000474828 RABL2AQ9UBK7 228 aaPredicted RBP13.52□□□□□ -0.25
SCAF11-206ENST00000474828 RABL2BQ9UNT1 228 aa13.52□□□□□ -0.25
SCAF11-206ENST00000474828 OR2W1Q9Y3N9 320 aa13.52□□□□□ -0.25
SCAF11-206ENST00000474828 M0QZK8 103 aa13.51□□□□□ -0.25
SCAF11-206ENST00000474828 CT45A6P0DMU7 189 aa13.51□□□□□ -0.25
SCAF11-206ENST00000474828 CT45A5P0DMU8 189 aa13.51□□□□□ -0.25
SCAF11-206ENST00000474828 CT45A7P0DMV0 189 aa13.51□□□□□ -0.25
SCAF11-206ENST00000474828 ZNF660Q6AZW8 331 aaPredicted RBP13.51□□□□□ -0.25
SCAF11-206ENST00000474828 OVCH2Q7RTZ1 564 aa13.51□□□□□ -0.25
SCAF11-206ENST00000474828 LYSMD2Q8IV50 215 aa13.51□□□□□ -0.25
SCAF11-206ENST00000474828 OR5AN1Q8NGI8 311 aa13.51□□□□□ -0.25
SCAF11-206ENST00000474828 TAF15Q92804 592 aaKnown RBP eCLIP13.51□□□□□ -0.25
SCAF11-206ENST00000474828 DGCR14Q96DF8 476 aaKnown RBP13.51□□□□□ -0.25
SCAF11-206ENST00000474828 ZNF702PQ9H963 129 aa13.51□□□□□ -0.25
SCAF11-206ENST00000474828 PLSCR3Q9NRY6 295 aa13.51□□□□□ -0.25
SCAF11-206ENST00000474828 EXTL2Q9UBQ6 330 aa13.51□□□□□ -0.25
SCAF11-206ENST00000474828 CLPSL1A2RUU4 121 aa13.5□□□□□ -0.25
SCAF11-206ENST00000474828 DPPA5A6NC42 116 aa13.5□□□□□ -0.25
SCAF11-206ENST00000474828 ZNF736B4DX44 427 aaPredicted RBP13.5□□□□□ -0.25
SCAF11-206ENST00000474828 CTDSPLO15194 276 aa13.5□□□□□ -0.25
SCAF11-206ENST00000474828 FGF16O43320 207 aa13.5□□□□□ -0.25
SCAF11-206ENST00000474828 IGKV1D-33P01593 117 aa13.5□□□□□ -0.25
SCAF11-206ENST00000474828 IGKV1-33P01594 117 aa13.5□□□□□ -0.25
SCAF11-206ENST00000474828 MDKP21741 143 aaPredicted RBP13.5□□□□□ -0.25
SCAF11-206ENST00000474828 PROK1P58294 105 aa13.5□□□□□ -0.25
SCAF11-206ENST00000474828 MSMO1Q15800 293 aa13.5□□□□□ -0.25
SCAF11-206ENST00000474828 RPL39P5Q59GN2 51 aa13.5□□□□□ -0.25
SCAF11-206ENST00000474828 FOXB2Q5VYV0 432 aa13.5□□□□□ -0.25
SCAF11-206ENST00000474828 C11orf88Q6PI97 169 aa13.5□□□□□ -0.25
SCAF11-206ENST00000474828 DHRS11Q6UWP2 260 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms