RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 ODF3L1Q8IXM7 274 aa8.13□□□□□ -1.11
COL8A1-206ENST00000474648 ARRDC1Q8N5I2 433 aa8.13□□□□□ -1.11
COL8A1-206ENST00000474648 BEND2Q8NDZ0 799 aa8.13□□□□□ -1.11
COL8A1-206ENST00000474648 OR51S1Q8NGJ8 323 aa8.13□□□□□ -1.11
COL8A1-206ENST00000474648 OR4P4Q8NGL7 312 aa8.13□□□□□ -1.11
COL8A1-206ENST00000474648 OR13C8Q8NGS7 320 aa8.13□□□□□ -1.11
COL8A1-206ENST00000474648 OR6F1Q8NGZ6 308 aa8.13□□□□□ -1.11
COL8A1-206ENST00000474648 OR8U1Q8NH10 309 aa8.13□□□□□ -1.11
COL8A1-206ENST00000474648 TERB2Q8NHR7 220 aa8.13□□□□□ -1.11
COL8A1-206ENST00000474648 ST6GALNAC6Q969X2 333 aa8.13□□□□□ -1.11
COL8A1-206ENST00000474648 C7orf50Q9BRJ6 194 aaKnown RBP8.13□□□□□ -1.11
COL8A1-206ENST00000474648 IFI27L2Q9H2X8 130 aa8.13□□□□□ -1.11
COL8A1-206ENST00000474648 GSX1Q9H4S2 264 aaPredicted RBP8.13□□□□□ -1.11
COL8A1-206ENST00000474648 YAE1D1Q9NRH1 226 aa8.13□□□□□ -1.11
COL8A1-206ENST00000474648 SLC2A8Q9NY64 477 aa8.13□□□□□ -1.11
COL8A1-206ENST00000474648 RNF150Q9ULK6 438 aa8.13□□□□□ -1.11
COL8A1-206ENST00000474648 KCNS2Q9ULS6 477 aa8.13□□□□□ -1.11
COL8A1-206ENST00000474648 SOX21Q9Y651 276 aaPredicted RBP8.13□□□□□ -1.11
COL8A1-206ENST00000474648 IGHV3OR16-10A0A075B7F0 116 aa8.12□□□□□ -1.11
COL8A1-206ENST00000474648 IGHV1-69DA0A0B4J2H0 117 aa8.12□□□□□ -1.11
COL8A1-206ENST00000474648 NAP1L6A6NFF2 107 aa8.12□□□□□ -1.11
COL8A1-206ENST00000474648 A8MV72 311 aaPredicted RBP8.12□□□□□ -1.11
COL8A1-206ENST00000474648 BUB1B-PAK6H3BSN5 160 aa8.12□□□□□ -1.11
COL8A1-206ENST00000474648 TOR1AO14656 332 aa8.12□□□□□ -1.11
COL8A1-206ENST00000474648 LYRM1O43325 122 aa8.12□□□□□ -1.11
COL8A1-206ENST00000474648 PPYP01298 95 aa8.12□□□□□ -1.11
COL8A1-206ENST00000474648 IGLV2-14P01704 120 aa8.12□□□□□ -1.11
COL8A1-206ENST00000474648 IGHV1-69P01742 117 aa8.12□□□□□ -1.11
COL8A1-206ENST00000474648 LUMP51884 338 aaPredicted RBP8.12□□□□□ -1.11
COL8A1-206ENST00000474648 HLA-DRB5Q30154 266 aa8.12□□□□□ -1.11
COL8A1-206ENST00000474648 C16orf87Q6PH81 154 aa8.12□□□□□ -1.11
COL8A1-206ENST00000474648 OR2AK2Q8NG84 335 aa8.12□□□□□ -1.11
COL8A1-206ENST00000474648 EDARADDQ8WWZ3 215 aa8.12□□□□□ -1.11
COL8A1-206ENST00000474648 MOB3AQ96BX8 217 aa8.12□□□□□ -1.11
COL8A1-206ENST00000474648 C5orf30Q96GV9 206 aa8.12□□□□□ -1.11
COL8A1-206ENST00000474648 ABHD14BQ96IU4 210 aa8.12□□□□□ -1.11
COL8A1-206ENST00000474648 ZNF251Q9BRH9 671 aa8.12□□□□□ -1.11
COL8A1-206ENST00000474648 ABHD14AQ9BUJ0 271 aa8.12□□□□□ -1.11
COL8A1-206ENST00000474648 MMP28Q9H239 520 aa8.12□□□□□ -1.11
COL8A1-206ENST00000474648 MCUBQ9NWR8 336 aa8.12□□□□□ -1.11
COL8A1-206ENST00000474648 GAB2Q9UQC2 676 aa8.12□□□□□ -1.11
COL8A1-206ENST00000474648 NPFFO15130 113 aa8.11□□□□□ -1.11
COL8A1-206ENST00000474648 ARG1P05089 322 aa8.11□□□□□ -1.11
COL8A1-206ENST00000474648 GNRHRP30968 328 aa8.11□□□□□ -1.11
COL8A1-206ENST00000474648 FAUP35544 74 aaKnown RBP8.11□□□□□ -1.11
COL8A1-206ENST00000474648 RAB7AP51149 207 aa8.11□□□□□ -1.11
COL8A1-206ENST00000474648 CCR6P51684 374 aa8.11□□□□□ -1.11
COL8A1-206ENST00000474648 ZNF137PP52743 207 aa8.11□□□□□ -1.11
COL8A1-206ENST00000474648 UCP3P55916 312 aa8.11□□□□□ -1.11
COL8A1-206ENST00000474648 EIF4EBP1Q13541 118 aaPredicted RBP8.11□□□□□ -1.11
COL8A1-206ENST00000474648 DCTN2Q13561 401 aaKnown RBP8.11□□□□□ -1.11
COL8A1-206ENST00000474648 DIAPH2-AS1Q14236 149 aa8.11□□□□□ -1.11
COL8A1-206ENST00000474648 SCGB2B2Q4G0G5 96 aa8.11□□□□□ -1.11
COL8A1-206ENST00000474648 FAM120AOSQ5T036 256 aa8.11□□□□□ -1.11
COL8A1-206ENST00000474648 RUSC1-AS1Q66K80 236 aa8.11□□□□□ -1.11
COL8A1-206ENST00000474648 IDO2Q6ZQW0 420 aa8.11□□□□□ -1.11
COL8A1-206ENST00000474648 LHFPL4Q7Z7J7 247 aa8.11□□□□□ -1.11
COL8A1-206ENST00000474648 TMEM17Q86X19 198 aa8.11□□□□□ -1.11
COL8A1-206ENST00000474648 FAM216AQ8WUB2 273 aa8.11□□□□□ -1.11
COL8A1-206ENST00000474648 C17orf50Q8WW18 174 aa8.11□□□□□ -1.11
COL8A1-206ENST00000474648 PRRT1Q99946 306 aa8.11□□□□□ -1.11
COL8A1-206ENST00000474648 FXYD6Q9H0Q3 95 aa8.11□□□□□ -1.11
COL8A1-206ENST00000474648 PALMDQ9NP74 551 aa8.11□□□□□ -1.11
COL8A1-206ENST00000474648 CCL28Q9NRJ3 127 aa8.11□□□□□ -1.11
COL8A1-206ENST00000474648 TMEM160Q9NX00 188 aa8.11□□□□□ -1.11
COL8A1-206ENST00000474648 DPM3Q9P2X0 92 aa8.11□□□□□ -1.11
COL8A1-206ENST00000474648 SONP18583 2426 aaKnown RBP8.1□□□□□ -1.11
COL8A1-206ENST00000474648 TRAV40A0A0B4J280 105 aa8.1□□□□□ -1.11
COL8A1-206ENST00000474648 CENPXA8MT69 81 aa8.1□□□□□ -1.11
COL8A1-206ENST00000474648 HTR1DP28221 377 aa8.1□□□□□ -1.11
COL8A1-206ENST00000474648 SLC6A1P30531 599 aa8.1□□□□□ -1.11
COL8A1-206ENST00000474648 LINC00205P59089 165 aa8.1□□□□□ -1.11
COL8A1-206ENST00000474648 FXYD4P59646 89 aa8.1□□□□□ -1.11
COL8A1-206ENST00000474648 HERV-K104P61576 105 aa8.1□□□□□ -1.11
COL8A1-206ENST00000474648 MIDNQ504T8 468 aa8.1□□□□□ -1.11
COL8A1-206ENST00000474648 PLA1AQ53H76 456 aa8.1□□□□□ -1.11
COL8A1-206ENST00000474648 RPL39P5Q59GN2 51 aa8.1□□□□□ -1.11
COL8A1-206ENST00000474648 MINOS1Q5TGZ0 78 aa8.1□□□□□ -1.11
COL8A1-206ENST00000474648 GPR157Q5UAW9 335 aa8.1□□□□□ -1.11
COL8A1-206ENST00000474648 CLEC9AQ6UXN8 241 aa8.1□□□□□ -1.11
COL8A1-206ENST00000474648 BRD3OSQ6XYD6 125 aa8.1□□□□□ -1.11
COL8A1-206ENST00000474648 ZNF833PQ6ZTB9 187 aa8.1□□□□□ -1.11
COL8A1-206ENST00000474648 LYG1Q8N1E2 194 aa8.1□□□□□ -1.11
COL8A1-206ENST00000474648 DYNAPQ8N1N2 210 aa8.1□□□□□ -1.11
COL8A1-206ENST00000474648 POC5Q8NA72 575 aa8.1□□□□□ -1.11
COL8A1-206ENST00000474648 OR10X1Q8NGY0 326 aa8.1□□□□□ -1.11
COL8A1-206ENST00000474648 NANPQ8TBE9 248 aa8.1□□□□□ -1.11
COL8A1-206ENST00000474648 MARCH1Q8TCQ1 289 aa8.1□□□□□ -1.11
COL8A1-206ENST00000474648 SECTM1Q8WVN6 248 aa8.1□□□□□ -1.11
COL8A1-206ENST00000474648 TOMM40LQ969M1 308 aa8.1□□□□□ -1.11
COL8A1-206ENST00000474648 CREB3L1Q96BA8 519 aa8.1□□□□□ -1.11
COL8A1-206ENST00000474648 RTBDNQ9BSG5 229 aaPredicted RBP8.1□□□□□ -1.11
COL8A1-206ENST00000474648 RSRP1Q9BUV0 290 aa8.1□□□□□ -1.11
COL8A1-206ENST00000474648 SLC5A7Q9GZV3 580 aa8.1□□□□□ -1.11
COL8A1-206ENST00000474648 OR2D2Q9H210 308 aa8.1□□□□□ -1.11
COL8A1-206ENST00000474648 GHITMQ9H3K2 345 aa8.1□□□□□ -1.11
COL8A1-206ENST00000474648 SDHAF2Q9NX18 166 aa8.1□□□□□ -1.11
COL8A1-206ENST00000474648 SCP2D1Q9UJQ7 156 aa8.1□□□□□ -1.11
COL8A1-206ENST00000474648 NUP50Q9UKX7 468 aa8.1□□□□□ -1.11
COL8A1-206ENST00000474648 GPR132Q9UNW8 380 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms