RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 RTN4IP1Q8WWV3 396 aaPredicted RBP12.67□□□□□ -0.38
COL1A1-204ENST00000474644 CFHR4Q92496 578 aa12.67□□□□□ -0.38
COL1A1-204ENST00000474644 IGHV1-3A0A0C4DH29 117 aa12.66□□□□□ -0.38
COL1A1-204ENST00000474644 SULT1C2O00338 296 aa12.66□□□□□ -0.38
COL1A1-204ENST00000474644 TIMM23O14925 209 aa12.66□□□□□ -0.38
COL1A1-204ENST00000474644 TXNL1O43396 289 aa12.66□□□□□ -0.38
COL1A1-204ENST00000474644 GPR137BO60478 399 aa12.66□□□□□ -0.38
COL1A1-204ENST00000474644 GAPDHP04406 335 aaKnown RBP12.66□□□□□ -0.38
COL1A1-204ENST00000474644 NAT1P18440 290 aa12.66□□□□□ -0.38
COL1A1-204ENST00000474644 BRS3P32247 399 aa12.66□□□□□ -0.38
COL1A1-204ENST00000474644 TNFSF8P32971 234 aa12.66□□□□□ -0.38
COL1A1-204ENST00000474644 OR3A3P47888 321 aa12.66□□□□□ -0.38
COL1A1-204ENST00000474644 ZNF833PQ6ZTB9 187 aa12.66□□□□□ -0.38
COL1A1-204ENST00000474644 TGIF2LXQ8IUE1 241 aa12.66□□□□□ -0.38
COL1A1-204ENST00000474644 OR8H3Q8N146 312 aa12.66□□□□□ -0.38
COL1A1-204ENST00000474644 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.66□□□□□ -0.38
COL1A1-204ENST00000474644 FAM216AQ8WUB2 273 aa12.66□□□□□ -0.38
COL1A1-204ENST00000474644 C15orf40Q8WUR7 153 aa12.66□□□□□ -0.38
COL1A1-204ENST00000474644 ABHD14BQ96IU4 210 aa12.66□□□□□ -0.38
COL1A1-204ENST00000474644 TCF19Q9Y242 345 aa12.66□□□□□ -0.38
COL1A1-204ENST00000474644 LANCL1O43813 399 aa12.65□□□□□ -0.38
COL1A1-204ENST00000474644 CD24P25063 80 aa12.65□□□□□ -0.38
COL1A1-204ENST00000474644 IL18Q14116 193 aa12.65□□□□□ -0.38
COL1A1-204ENST00000474644 HABP2Q14520 560 aaPredicted RBP12.65□□□□□ -0.38
COL1A1-204ENST00000474644 FBLN7Q53RD9 439 aa12.65□□□□□ -0.38
COL1A1-204ENST00000474644 PYHIN1Q6K0P9 492 aa12.65□□□□□ -0.38
COL1A1-204ENST00000474644 C16orf87Q6PH81 154 aa12.65□□□□□ -0.38
COL1A1-204ENST00000474644 DRAM1Q8N682 238 aa12.65□□□□□ -0.38
COL1A1-204ENST00000474644 OR5AP2Q8NGF4 316 aa12.65□□□□□ -0.38
COL1A1-204ENST00000474644 OR56B4Q8NH76 319 aa12.65□□□□□ -0.38
COL1A1-204ENST00000474644 ZNF251Q9BRH9 671 aa12.65□□□□□ -0.38
COL1A1-204ENST00000474644 NECAP2Q9NVZ3 263 aa12.65□□□□□ -0.38
COL1A1-204ENST00000474644 PIPOXQ9P0Z9 390 aa12.65□□□□□ -0.38
COL1A1-204ENST00000474644 A6NDX4 124 aa12.64□□□□□ -0.39
COL1A1-204ENST00000474644 FAM181BA6NEQ2 426 aa12.64□□□□□ -0.39
COL1A1-204ENST00000474644 RAB29O14966 203 aa12.64□□□□□ -0.39
COL1A1-204ENST00000474644 CHST1O43916 411 aa12.64□□□□□ -0.39
COL1A1-204ENST00000474644 OR8U9P0C7N5 309 aa12.64□□□□□ -0.39
COL1A1-204ENST00000474644 NFYAP23511 347 aaPredicted RBP12.64□□□□□ -0.39
COL1A1-204ENST00000474644 S100A5P33763 92 aa12.64□□□□□ -0.39
COL1A1-204ENST00000474644 RCVRNP35243 200 aa12.64□□□□□ -0.39
COL1A1-204ENST00000474644 RPL39P5Q59GN2 51 aa12.64□□□□□ -0.39
COL1A1-204ENST00000474644 FAM71F2Q6NXP2 309 aa12.64□□□□□ -0.39
COL1A1-204ENST00000474644 CCBE1Q6UXH8 406 aaPredicted RBP12.64□□□□□ -0.39
COL1A1-204ENST00000474644 LIAT1Q6ZQX7 453 aa12.64□□□□□ -0.39
COL1A1-204ENST00000474644 MOB3BQ86TA1 216 aa12.64□□□□□ -0.39
COL1A1-204ENST00000474644 OR8U1Q8NH10 309 aa12.64□□□□□ -0.39
COL1A1-204ENST00000474644 OR52I2Q8NH67 350 aa12.64□□□□□ -0.39
COL1A1-204ENST00000474644 MRPL20Q9BYC9 149 aaKnown RBP12.64□□□□□ -0.39
COL1A1-204ENST00000474644 OR2D2Q9H210 308 aa12.64□□□□□ -0.39
COL1A1-204ENST00000474644 GHITMQ9H3K2 345 aa12.64□□□□□ -0.39
COL1A1-204ENST00000474644 RABL2AQ9UBK7 228 aaPredicted RBP12.64□□□□□ -0.39
COL1A1-204ENST00000474644 RNF150Q9ULK6 438 aa12.64□□□□□ -0.39
COL1A1-204ENST00000474644 RABL2BQ9UNT1 228 aa12.64□□□□□ -0.39
COL1A1-204ENST00000474644 FAM90A9PA6NNJ1 464 aa12.63□□□□□ -0.39
COL1A1-204ENST00000474644 TUSC2O75896 110 aa12.63□□□□□ -0.39
COL1A1-204ENST00000474644 SNRNP70P08621 437 aaKnown RBP12.63□□□□□ -0.39
COL1A1-204ENST00000474644 OR5H8P0DN80 308 aa12.63□□□□□ -0.39
COL1A1-204ENST00000474644 GPR12P47775 334 aa12.63□□□□□ -0.39
COL1A1-204ENST00000474644 TAS2R46P59540 309 aa12.63□□□□□ -0.39
COL1A1-204ENST00000474644 MRPS10P82664 201 aaKnown RBP12.63□□□□□ -0.39
COL1A1-204ENST00000474644 DGCR2P98153 550 aa12.63□□□□□ -0.39
COL1A1-204ENST00000474644 CDK10Q15131 360 aa12.63□□□□□ -0.39
COL1A1-204ENST00000474644 TMEM219Q86XT9 240 aa12.63□□□□□ -0.39
COL1A1-204ENST00000474644 LYSMD2Q8IV50 215 aa12.63□□□□□ -0.39
COL1A1-204ENST00000474644 SMIM4Q8WVI0 70 aa12.63□□□□□ -0.39
COL1A1-204ENST00000474644 CAPSLQ8WWF8 208 aa12.63□□□□□ -0.39
COL1A1-204ENST00000474644 TMEM158Q8WZ71 300 aa12.63□□□□□ -0.39
COL1A1-204ENST00000474644 S1PR3Q99500 378 aa12.63□□□□□ -0.39
COL1A1-204ENST00000474644 SOSTQ9BQB4 213 aa12.63□□□□□ -0.39
COL1A1-204ENST00000474644 ZNF221Q9UK13 617 aa12.63□□□□□ -0.39
COL1A1-204ENST00000474644 PITPNC1Q9UKF7 332 aa12.63□□□□□ -0.39
COL1A1-204ENST00000474644 OR2W1Q9Y3N9 320 aa12.63□□□□□ -0.39
COL1A1-204ENST00000474644 V9GYH0 126 aa12.63□□□□□ -0.39
COL1A1-204ENST00000474644 IGHV3-72A0A0B4J1Y9 119 aa12.62□□□□□ -0.39
COL1A1-204ENST00000474644 FABP12A6NFH5 140 aa12.62□□□□□ -0.39
COL1A1-204ENST00000474644 GABARAPH6UMI1 98 aa12.62□□□□□ -0.39
COL1A1-204ENST00000474644 CTDSPLO15194 276 aa12.62□□□□□ -0.39
COL1A1-204ENST00000474644 PMP2P02689 132 aa12.62□□□□□ -0.39
COL1A1-204ENST00000474644 HLA-DMAP28067 261 aa12.62□□□□□ -0.39
COL1A1-204ENST00000474644 HRH1P35367 487 aa12.62□□□□□ -0.39
COL1A1-204ENST00000474644 ACTBP60709 375 aa12.62□□□□□ -0.39
COL1A1-204ENST00000474644 RPL15P61313 204 aaKnown RBP12.62□□□□□ -0.39
COL1A1-204ENST00000474644 ACTG1P63261 375 aa12.62□□□□□ -0.39
COL1A1-204ENST00000474644 LSAMPQ13449 338 aa12.62□□□□□ -0.39
COL1A1-204ENST00000474644 FAM131AQ6UXB0 335 aa12.62□□□□□ -0.39
COL1A1-204ENST00000474644 CCDC190Q86UF4 302 aa12.62□□□□□ -0.39
COL1A1-204ENST00000474644 OR6Q1Q8NGQ2 317 aa12.62□□□□□ -0.39
COL1A1-204ENST00000474644 OR5H2Q8NGV7 314 aa12.62□□□□□ -0.39
COL1A1-204ENST00000474644 FCAMRQ8WWV6 532 aa12.62□□□□□ -0.39
COL1A1-204ENST00000474644 TAF15Q92804 592 aaKnown RBP eCLIP12.62□□□□□ -0.39
COL1A1-204ENST00000474644 C5orf30Q96GV9 206 aa12.62□□□□□ -0.39
COL1A1-204ENST00000474644 NABP2Q9BQ15 211 aa12.62□□□□□ -0.39
COL1A1-204ENST00000474644 C19orf24Q9BVV8 132 aa12.62□□□□□ -0.39
COL1A1-204ENST00000474644 BATF3Q9NR55 127 aa12.62□□□□□ -0.39
COL1A1-204ENST00000474644 EHFQ9NZC4 300 aa12.62□□□□□ -0.39
COL1A1-204ENST00000474644 KLK11Q9UBX7 282 aa12.62□□□□□ -0.39
COL1A1-204ENST00000474644 MTFP1Q9UDX5 166 aa12.62□□□□□ -0.39
COL1A1-204ENST00000474644 RBM7Q9Y580 266 aaKnown RBP12.62□□□□□ -0.39
COL1A1-204ENST00000474644 IGKV1D-13A0A0B4J2D9 117 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms