RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 C19orf12Q9NSK7 152 aa16.37■□□□□ 0.21
SSR1-204ENST00000474597 TNFSF18Q9UNG2 199 aa16.37■□□□□ 0.21
SSR1-204ENST00000474597 RP2O75695 350 aa16.36■□□□□ 0.21
SSR1-204ENST00000474597 RLN2P04090 185 aa16.36■□□□□ 0.21
SSR1-204ENST00000474597 DAOP14920 347 aa16.36■□□□□ 0.21
SSR1-204ENST00000474597 VDAC1P21796 283 aa16.36■□□□□ 0.21
SSR1-204ENST00000474597 RAB7AP51149 207 aa16.36■□□□□ 0.21
SSR1-204ENST00000474597 MRPS11P82912 194 aaKnown RBP16.36■□□□□ 0.21
SSR1-204ENST00000474597 IL15RAQ13261 267 aa16.36■□□□□ 0.21
SSR1-204ENST00000474597 TMUB2Q71RG4 321 aa16.36■□□□□ 0.21
SSR1-204ENST00000474597 FOXRED2Q8IWF2 684 aa16.36■□□□□ 0.21
SSR1-204ENST00000474597 RNASE11Q8TAA1 199 aaKnown RBP16.36■□□□□ 0.21
SSR1-204ENST00000474597 A0A0D9SG52 128 aa16.35■□□□□ 0.21
SSR1-204ENST00000474597 IGHV3-7P01780 117 aa16.35■□□□□ 0.21
SSR1-204ENST00000474597 IGHV2-70P01814 119 aa16.35■□□□□ 0.21
SSR1-204ENST00000474597 NUP62P37198 522 aaPredicted RBP16.35■□□□□ 0.21
SSR1-204ENST00000474597 ZNF273Q14593 569 aa16.35■□□□□ 0.21
SSR1-204ENST00000474597 Q3ZCU0 254 aa16.35■□□□□ 0.21
SSR1-204ENST00000474597 THOC7Q6I9Y2 204 aaKnown RBP16.35■□□□□ 0.21
SSR1-204ENST00000474597 PRSS54Q6PEW0 395 aa16.35■□□□□ 0.21
SSR1-204ENST00000474597 BTNL3Q6UXE8 466 aa16.35■□□□□ 0.21
SSR1-204ENST00000474597 ZNF714Q96N38 554 aa16.35■□□□□ 0.21
SSR1-204ENST00000474597 AGMATQ9BSE5 352 aa16.35■□□□□ 0.21
SSR1-204ENST00000474597 SDHAF2Q9NX18 166 aa16.35■□□□□ 0.21
SSR1-204ENST00000474597 SMG1Q96Q15 3661 aaKnown RBP16.35■□□□□ 0.21
SSR1-204ENST00000474597 LY6HO94772 140 aa16.35■□□□□ 0.21
SSR1-204ENST00000474597 OR2F2O95006 317 aa16.35■□□□□ 0.21
SSR1-204ENST00000474597 GOSR1O95249 250 aa16.35■□□□□ 0.21
SSR1-204ENST00000474597 OR2F1Q13607 317 aa16.35■□□□□ 0.21
SSR1-204ENST00000474597 ESCO2Q56NI9 601 aa16.35■□□□□ 0.21
SSR1-204ENST00000474597 AVPI1Q5T686 147 aa16.35■□□□□ 0.21
SSR1-204ENST00000474597 OR8H1Q8NGG4 311 aa16.35■□□□□ 0.21
SSR1-204ENST00000474597 TCTEX1D2Q8WW35 142 aa16.35■□□□□ 0.21
SSR1-204ENST00000474597 RAB1CQ92928 201 aa16.35■□□□□ 0.21
SSR1-204ENST00000474597 ABHD14AQ9BUJ0 271 aa16.35■□□□□ 0.21
SSR1-204ENST00000474597 RNF126Q9BV68 326 aa16.35■□□□□ 0.21
SSR1-204ENST00000474597 LINC00574Q9H8X3 128 aa16.35■□□□□ 0.21
SSR1-204ENST00000474597 ZFP57Q9NU63 452 aa16.35■□□□□ 0.21
SSR1-204ENST00000474597 LSM5Q9Y4Y9 91 aaKnown RBP16.35■□□□□ 0.21
SSR1-204ENST00000474597 ITGB1BP1O14713 200 aa16.34■□□□□ 0.21
SSR1-204ENST00000474597 PPIHO43447 177 aaKnown RBP16.34■□□□□ 0.21
SSR1-204ENST00000474597 C1QL1O75973 258 aa16.34■□□□□ 0.21
SSR1-204ENST00000474597 CLDN1O95832 211 aa16.34■□□□□ 0.21
SSR1-204ENST00000474597 PRAMEF5Q5TYX0 476 aa16.34■□□□□ 0.21
SSR1-204ENST00000474597 TMEM200BQ69YZ2 307 aa16.34■□□□□ 0.21
SSR1-204ENST00000474597 ZNF66Q6ZN08 573 aa16.34■□□□□ 0.21
SSR1-204ENST00000474597 ACOT7LQ6ZUV0 252 aa16.34■□□□□ 0.21
SSR1-204ENST00000474597 OR10A7Q8NGE5 316 aa16.34■□□□□ 0.21
SSR1-204ENST00000474597 OR52M1Q8NGK5 317 aa16.34■□□□□ 0.21
SSR1-204ENST00000474597 C5orf30Q96GV9 206 aa16.34■□□□□ 0.21
SSR1-204ENST00000474597 HSD17B10Q99714 261 aaKnown RBP16.34■□□□□ 0.21
SSR1-204ENST00000474597 FCN3O75636 299 aa16.33■□□□□ 0.21
SSR1-204ENST00000474597 ZNF345Q14585 488 aa16.33■□□□□ 0.21
SSR1-204ENST00000474597 FAM219AQ8IW50 185 aa16.33■□□□□ 0.21
SSR1-204ENST00000474597 LEAP2Q969E1 77 aa16.33■□□□□ 0.21
SSR1-204ENST00000474597 OR5AC2Q9NZP5 309 aa16.33■□□□□ 0.21
SSR1-204ENST00000474597 H0YIZ8 118 aa16.33■□□□□ 0.2
SSR1-204ENST00000474597 CDKN1AP38936 164 aa16.33■□□□□ 0.2
SSR1-204ENST00000474597 TCTEX1D1Q8N7M0 179 aa16.33■□□□□ 0.2
SSR1-204ENST00000474597 RAB39BQ96DA2 213 aa16.33■□□□□ 0.2
SSR1-204ENST00000474597 CHODLQ9H9P2 273 aa16.33■□□□□ 0.2
SSR1-204ENST00000474597 RPUSD1Q9UJJ7 312 aaKnown RBP16.33■□□□□ 0.2
SSR1-204ENST00000474597 RALYQ9UKM9 306 aaKnown RBP16.33■□□□□ 0.2
SSR1-204ENST00000474597 KLF2Q9Y5W3 355 aaPredicted RBP16.33■□□□□ 0.2
SSR1-204ENST00000474597 LYL1P12980 280 aa16.32■□□□□ 0.2
SSR1-204ENST00000474597 CCL3L1P16619 93 aa16.32■□□□□ 0.2
SSR1-204ENST00000474597 AKR1C2P52895 323 aa16.32■□□□□ 0.2
SSR1-204ENST00000474597 EIF4EBP1Q13541 118 aaPredicted RBP16.32■□□□□ 0.2
SSR1-204ENST00000474597 NMSQ5H8A3 153 aa16.32■□□□□ 0.2
SSR1-204ENST00000474597 ZNF767PQ75MW2 155 aa16.32■□□□□ 0.2
SSR1-204ENST00000474597 OR8B3Q8NGG8 313 aa16.32■□□□□ 0.2
SSR1-204ENST00000474597 OR1S1Q8NH92 325 aa16.32■□□□□ 0.2
SSR1-204ENST00000474597 OR8B2Q96RD0 313 aa16.32■□□□□ 0.2
SSR1-204ENST00000474597 MIOXQ9UGB7 285 aa16.32■□□□□ 0.2
SSR1-204ENST00000474597 KANTRA0A1W2PQU2 76 aa16.31■□□□□ 0.2
SSR1-204ENST00000474597 DEDDO75618 318 aa16.31■□□□□ 0.2
SSR1-204ENST00000474597 MMP23AO75900 390 aa16.31■□□□□ 0.2
SSR1-204ENST00000474597 MBPP02686 304 aaPredicted RBP16.31■□□□□ 0.2
SSR1-204ENST00000474597 GNG10P50151 68 aa16.31■□□□□ 0.2
SSR1-204ENST00000474597 ZNF134P52741 427 aa16.31■□□□□ 0.2
SSR1-204ENST00000474597 RPL30P62888 115 aaKnown RBP16.31■□□□□ 0.2
SSR1-204ENST00000474597 ZNF585BQ52M93 769 aa16.31■□□□□ 0.2
SSR1-204ENST00000474597 OR2B11Q5JQS5 317 aa16.31■□□□□ 0.2
SSR1-204ENST00000474597 KCNRGQ8N5I3 272 aa16.31■□□□□ 0.2
SSR1-204ENST00000474597 OR4D5Q8NGN0 318 aa16.31■□□□□ 0.2
SSR1-204ENST00000474597 RRNAD1Q96FB5 475 aaKnown RBP16.31■□□□□ 0.2
SSR1-204ENST00000474597 IFI27L2Q9H2X8 130 aa16.31■□□□□ 0.2
SSR1-204ENST00000474597 HEXA-AS1Q9H8Q6 139 aa16.31■□□□□ 0.2
SSR1-204ENST00000474597 DOCK11Q5JSL3 2073 aa16.31■□□□□ 0.2
SSR1-204ENST00000474597 TRBV23-1A0A0A0MS06 115 aa16.31■□□□□ 0.2
SSR1-204ENST00000474597 RNF222A6NCQ9 220 aa16.31■□□□□ 0.2
SSR1-204ENST00000474597 SLC31A2O15432 143 aa16.31■□□□□ 0.2
SSR1-204ENST00000474597 ST8SIA3O43173 380 aa16.31■□□□□ 0.2
SSR1-204ENST00000474597 LPAR6P43657 344 aa16.31■□□□□ 0.2
SSR1-204ENST00000474597 CT45A1Q5HYN5 189 aa16.31■□□□□ 0.2
SSR1-204ENST00000474597 TEX261Q6UWH6 196 aa16.31■□□□□ 0.2
SSR1-204ENST00000474597 HEPN1Q6WQI6 88 aa16.31■□□□□ 0.2
SSR1-204ENST00000474597 SPAG16Q8N0X2 631 aa16.31■□□□□ 0.2
SSR1-204ENST00000474597 CT45A3Q8NHU0 189 aa16.31■□□□□ 0.2
SSR1-204ENST00000474597 U3KQ87 197 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms