RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 RPS18P62269 152 aaKnown RBP6.87□□□□□ -1.31
CCDC93-208ENST00000474546 COL10A1Q03692 680 aa6.87□□□□□ -1.31
CCDC93-208ENST00000474546 ZNF154Q13106 437 aa6.87□□□□□ -1.31
CCDC93-208ENST00000474546 COL5A1-AS1Q5SY13 56 aa6.87□□□□□ -1.31
CCDC93-208ENST00000474546 CARD17Q5XLA6 110 aa6.87□□□□□ -1.31
CCDC93-208ENST00000474546 WDR73Q6P4I2 378 aa6.87□□□□□ -1.31
CCDC93-208ENST00000474546 PET117Q6UWS5 81 aa6.87□□□□□ -1.31
CCDC93-208ENST00000474546 C16orf82Q7Z2V1 217 aa6.87□□□□□ -1.31
CCDC93-208ENST00000474546 P4HA3Q7Z4N8 544 aa6.87□□□□□ -1.31
CCDC93-208ENST00000474546 CPEB2Q7Z5Q1 589 aaKnown RBP6.87□□□□□ -1.31
CCDC93-208ENST00000474546 GAPTQ8N292 157 aa6.87□□□□□ -1.31
CCDC93-208ENST00000474546 ZNF525Q8N782 197 aa6.87□□□□□ -1.31
CCDC93-208ENST00000474546 KLHDC1Q8N7A1 406 aa6.87□□□□□ -1.31
CCDC93-208ENST00000474546 OR2D3Q8NGH3 330 aa6.87□□□□□ -1.31
CCDC93-208ENST00000474546 NPRL2Q8WTW4 380 aa6.87□□□□□ -1.31
CCDC93-208ENST00000474546 TAF15Q92804 592 aaKnown RBP eCLIP6.87□□□□□ -1.31
CCDC93-208ENST00000474546 ZNF501Q96CX3 271 aaPredicted RBP6.87□□□□□ -1.31
CCDC93-208ENST00000474546 BSCL2Q96G97 398 aaPredicted RBP6.87□□□□□ -1.31
CCDC93-208ENST00000474546 NUDT22Q9BRQ3 303 aa6.87□□□□□ -1.31
CCDC93-208ENST00000474546 MIEN1Q9BRT3 115 aa6.87□□□□□ -1.31
CCDC93-208ENST00000474546 RBM24Q9BX46 236 aaKnown RBP6.87□□□□□ -1.31
CCDC93-208ENST00000474546 FGF21Q9NSA1 209 aa6.87□□□□□ -1.31
CCDC93-208ENST00000474546 NAGKQ9UJ70 344 aa6.87□□□□□ -1.31
CCDC93-208ENST00000474546 MRPS18CQ9Y3D5 142 aaKnown RBP6.87□□□□□ -1.31
CCDC93-208ENST00000474546 THADAQ6YHU6 1953 aa6.87□□□□□ -1.31
CCDC93-208ENST00000474546 HIVEP3Q5T1R4 2406 aa6.87□□□□□ -1.31
CCDC93-208ENST00000474546 KNTC1P50748 2209 aa6.86□□□□□ -1.31
CCDC93-208ENST00000474546 AKAP9Q99996 3911 aa6.86□□□□□ -1.31
CCDC93-208ENST00000474546 ATRQ13535 2644 aa6.86□□□□□ -1.31
CCDC93-208ENST00000474546 A0A1B0GV50 99 aa6.86□□□□□ -1.31
CCDC93-208ENST00000474546 MARCH11A6NNE9 402 aa6.86□□□□□ -1.31
CCDC93-208ENST00000474546 FAM90A9PA6NNJ1 464 aa6.86□□□□□ -1.31
CCDC93-208ENST00000474546 PATE3B3GLJ2 98 aa6.86□□□□□ -1.31
CCDC93-208ENST00000474546 CBR3O75828 277 aa6.86□□□□□ -1.31
CCDC93-208ENST00000474546 OR2J2O76002 312 aa6.86□□□□□ -1.31
CCDC93-208ENST00000474546 SCGB1D1O95968 90 aa6.86□□□□□ -1.31
CCDC93-208ENST00000474546 RNF224P0DH78 156 aa6.86□□□□□ -1.31
CCDC93-208ENST00000474546 OR3A1P47881 315 aa6.86□□□□□ -1.31
CCDC93-208ENST00000474546 TDGF1P3P51864 188 aa6.86□□□□□ -1.31
CCDC93-208ENST00000474546 RRADP55042 308 aa6.86□□□□□ -1.31
CCDC93-208ENST00000474546 GFERP55789 205 aa6.86□□□□□ -1.31
CCDC93-208ENST00000474546 YPEL3P61236 119 aaPredicted RBP6.86□□□□□ -1.31
CCDC93-208ENST00000474546 SELENOTP62341 195 aa6.86□□□□□ -1.31
CCDC93-208ENST00000474546 RPL23P62829 140 aaKnown RBP6.86□□□□□ -1.31
CCDC93-208ENST00000474546 SLC38A11Q08AI6 406 aa6.86□□□□□ -1.31
CCDC93-208ENST00000474546 CATR1Q13166 79 aa6.86□□□□□ -1.31
CCDC93-208ENST00000474546 C1orf61Q13536 156 aa6.86□□□□□ -1.31
CCDC93-208ENST00000474546 NKAIN1Q4KMZ8 207 aa6.86□□□□□ -1.31
CCDC93-208ENST00000474546 PDZD11Q5EBL8 140 aa6.86□□□□□ -1.31
CCDC93-208ENST00000474546 CXorf66Q5JRM2 361 aaPredicted RBP6.86□□□□□ -1.31
CCDC93-208ENST00000474546 FAM162BQ5T6X4 162 aa6.86□□□□□ -1.31
CCDC93-208ENST00000474546 OTPQ5XKR4 325 aa6.86□□□□□ -1.31
CCDC93-208ENST00000474546 TMEM217Q8N7C4 229 aa6.86□□□□□ -1.31
CCDC93-208ENST00000474546 ZNF611Q8N823 705 aa6.86□□□□□ -1.31
CCDC93-208ENST00000474546 AGBL5Q8NDL9 886 aa6.86□□□□□ -1.31
CCDC93-208ENST00000474546 OR5A2Q8NGI9 324 aa6.86□□□□□ -1.31
CCDC93-208ENST00000474546 PSMF1Q92530 271 aa6.86□□□□□ -1.31
CCDC93-208ENST00000474546 WDYHV1Q96HA8 205 aa6.86□□□□□ -1.31
CCDC93-208ENST00000474546 MS4A10Q96PG2 267 aa6.86□□□□□ -1.31
CCDC93-208ENST00000474546 DIRC2Q96SL1 478 aa6.86□□□□□ -1.31
CCDC93-208ENST00000474546 KLHDC3Q9BQ90 382 aa6.86□□□□□ -1.31
CCDC93-208ENST00000474546 HDHD3Q9BSH5 251 aaPredicted RBP6.86□□□□□ -1.31
CCDC93-208ENST00000474546 C1QTNF5Q9BXJ0 243 aa6.86□□□□□ -1.31
CCDC93-208ENST00000474546 PKIBQ9C010 78 aa6.86□□□□□ -1.31
CCDC93-208ENST00000474546 PRO1933Q9H354 126 aa6.86□□□□□ -1.31
CCDC93-208ENST00000474546 LIME1Q9H400 295 aa6.86□□□□□ -1.31
CCDC93-208ENST00000474546 TMEM38BQ9NVV0 291 aa6.86□□□□□ -1.31
CCDC93-208ENST00000474546 KCNIP1Q9NZI2 227 aa6.86□□□□□ -1.31
CCDC93-208ENST00000474546 MPC1Q9Y5U8 109 aa6.86□□□□□ -1.31
CCDC93-208ENST00000474546 MDFIC2A0A1B0GVS7 189 aa6.85□□□□□ -1.31
CCDC93-208ENST00000474546 DLEU1O43261 78 aa6.85□□□□□ -1.31
CCDC93-208ENST00000474546 TNFSF13O75888 250 aa6.85□□□□□ -1.31
CCDC93-208ENST00000474546 IGHEP01854 428 aa6.85□□□□□ -1.31
CCDC93-208ENST00000474546 GYPAP02724 150 aa6.85□□□□□ -1.31
CCDC93-208ENST00000474546 REG1AP05451 166 aa6.85□□□□□ -1.31
CCDC93-208ENST00000474546 CELA2BP08218 269 aaPredicted RBP6.85□□□□□ -1.31
CCDC93-208ENST00000474546 HOXB4P17483 251 aaPredicted RBP6.85□□□□□ -1.31
CCDC93-208ENST00000474546 PAX9P55771 341 aa6.85□□□□□ -1.31
CCDC93-208ENST00000474546 TLE1Q04724 770 aa6.85□□□□□ -1.31
CCDC93-208ENST00000474546 HERPUD1Q15011 391 aa6.85□□□□□ -1.31
CCDC93-208ENST00000474546 IGFBP7Q16270 282 aa6.85□□□□□ -1.31
CCDC93-208ENST00000474546 RTL8BQ17RB0 113 aa6.85□□□□□ -1.31
CCDC93-208ENST00000474546 CEACAM21Q3KPI0 293 aa6.85□□□□□ -1.31
CCDC93-208ENST00000474546 TRIM61Q5EBN2 209 aa6.85□□□□□ -1.31
CCDC93-208ENST00000474546 TSPO2Q5TGU0 170 aa6.85□□□□□ -1.31
CCDC93-208ENST00000474546 GFI1BQ5VTD9 330 aa6.85□□□□□ -1.31
CCDC93-208ENST00000474546 ZNF880Q6PDB4 577 aa6.85□□□□□ -1.31
CCDC93-208ENST00000474546 LCN15Q6UWW0 184 aa6.85□□□□□ -1.31
CCDC93-208ENST00000474546 TMEM14EPQ6UXP3 125 aa6.85□□□□□ -1.31
CCDC93-208ENST00000474546 ZNF818PQ6ZRF7 136 aa6.85□□□□□ -1.31
CCDC93-208ENST00000474546 SYT13Q7L8C5 426 aa6.85□□□□□ -1.31
CCDC93-208ENST00000474546 ZDHHC23Q8IYP9 409 aa6.85□□□□□ -1.31
CCDC93-208ENST00000474546 OR10P1Q8NGE3 313 aa6.85□□□□□ -1.31
CCDC93-208ENST00000474546 OR10V1Q8NGI7 309 aa6.85□□□□□ -1.31
CCDC93-208ENST00000474546 OR11L1Q8NGX0 322 aa6.85□□□□□ -1.31
CCDC93-208ENST00000474546 OR2AE1Q8NHA4 323 aa6.85□□□□□ -1.31
CCDC93-208ENST00000474546 PLPPR1Q8TBJ4 325 aa6.85□□□□□ -1.31
CCDC93-208ENST00000474546 OR5P3Q8WZ94 311 aa6.85□□□□□ -1.31
CCDC93-208ENST00000474546 APOBEC3DQ96AK3 386 aaPredicted RBP6.85□□□□□ -1.31
CCDC93-208ENST00000474546 TMEM45BQ96B21 275 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms