RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 DUSP21Q9H596 190 aa15.91■□□□□ 0.14
PDLIM4-206ENST00000474421 NKX1-2Q9UD57 310 aaPredicted RBP15.91■□□□□ 0.14
PDLIM4-206ENST00000474421 OR5H14A6NHG9 310 aa15.9■□□□□ 0.14
PDLIM4-206ENST00000474421 ANKRD65E5RJM6 399 aa15.9■□□□□ 0.14
PDLIM4-206ENST00000474421 ST8SIA5O15466 376 aa15.9■□□□□ 0.14
PDLIM4-206ENST00000474421 AQP4P55087 323 aa15.9■□□□□ 0.14
PDLIM4-206ENST00000474421 FAM89BQ8N5H3 189 aa15.9■□□□□ 0.14
PDLIM4-206ENST00000474421 MYOZ3Q8TDC0 251 aa15.9■□□□□ 0.14
PDLIM4-206ENST00000474421 EDARADDQ8WWZ3 215 aa15.9■□□□□ 0.14
PDLIM4-206ENST00000474421 RBMXL1Q96E39 390 aaKnown RBP15.9■□□□□ 0.14
PDLIM4-206ENST00000474421 RITA1Q96K30 269 aa15.9■□□□□ 0.14
PDLIM4-206ENST00000474421 UBE2E2Q96LR5 201 aa15.9■□□□□ 0.14
PDLIM4-206ENST00000474421 B9D2Q9BPU9 175 aa15.9■□□□□ 0.14
PDLIM4-206ENST00000474421 PARP11Q9NR21 331 aa15.9■□□□□ 0.14
PDLIM4-206ENST00000474421 HSF4Q9ULV5 492 aa15.9■□□□□ 0.14
PDLIM4-206ENST00000474421 WSB1Q9Y6I7 421 aa15.9■□□□□ 0.14
PDLIM4-206ENST00000474421 A0A0A6YYD4 124 aa15.89■□□□□ 0.13
PDLIM4-206ENST00000474421 IGHV7-81A0A0B4J1V7 117 aa15.89■□□□□ 0.13
PDLIM4-206ENST00000474421 ATP6V0E1O15342 81 aa15.89■□□□□ 0.13
PDLIM4-206ENST00000474421 NDUFA3O95167 84 aa15.89■□□□□ 0.13
PDLIM4-206ENST00000474421 ZBTB25P24278 435 aa15.89■□□□□ 0.13
PDLIM4-206ENST00000474421 CNTFRP26992 372 aa15.89■□□□□ 0.13
PDLIM4-206ENST00000474421 PPIFP30405 207 aaKnown RBP15.89■□□□□ 0.13
PDLIM4-206ENST00000474421 MC5RP33032 325 aa15.89■□□□□ 0.13
PDLIM4-206ENST00000474421 MLLT11Q13015 90 aaPredicted RBP15.89■□□□□ 0.13
PDLIM4-206ENST00000474421 FHL3Q13643 280 aa15.89■□□□□ 0.13
PDLIM4-206ENST00000474421 P2RY14Q15391 338 aa15.89■□□□□ 0.13
PDLIM4-206ENST00000474421 RAB11BQ15907 218 aa15.89■□□□□ 0.13
PDLIM4-206ENST00000474421 TMEM91Q6ZNR0 172 aa15.89■□□□□ 0.13
PDLIM4-206ENST00000474421 AK3Q9UIJ7 227 aa15.89■□□□□ 0.13
PDLIM4-206ENST00000474421 VSIG4Q9Y279 399 aa15.89■□□□□ 0.13
PDLIM4-206ENST00000474421 DNAH9Q9NYC9 4486 aa15.88■□□□□ 0.13
PDLIM4-206ENST00000474421 TRAV41A0A0B4J266 112 aa15.88■□□□□ 0.13
PDLIM4-206ENST00000474421 G3V318 75 aa15.88■□□□□ 0.13
PDLIM4-206ENST00000474421 SOCS1O15524 211 aa15.88■□□□□ 0.13
PDLIM4-206ENST00000474421 HSPA12AO43301 675 aa15.88■□□□□ 0.13
PDLIM4-206ENST00000474421 RBBP9O75884 186 aa15.88■□□□□ 0.13
PDLIM4-206ENST00000474421 IGLV1-40P01703 118 aa15.88■□□□□ 0.13
PDLIM4-206ENST00000474421 CPEP16870 476 aa15.88■□□□□ 0.13
PDLIM4-206ENST00000474421 PSMD7P51665 324 aa15.88■□□□□ 0.13
PDLIM4-206ENST00000474421 RUNX1Q01196 453 aa15.88■□□□□ 0.13
PDLIM4-206ENST00000474421 ZNF660Q6AZW8 331 aaPredicted RBP15.88■□□□□ 0.13
PDLIM4-206ENST00000474421 FAM131AQ6UXB0 335 aa15.88■□□□□ 0.13
PDLIM4-206ENST00000474421 OR11H1Q8NG94 326 aa15.88■□□□□ 0.13
PDLIM4-206ENST00000474421 CCDC90BQ9GZT6 254 aa15.88■□□□□ 0.13
PDLIM4-206ENST00000474421 VCX3BQ9H321 246 aa15.88■□□□□ 0.13
PDLIM4-206ENST00000474421 C12orf4Q9NQ89 552 aa15.88■□□□□ 0.13
PDLIM4-206ENST00000474421 AK6Q9Y3D8 172 aaKnown RBP15.88■□□□□ 0.13
PDLIM4-206ENST00000474421 SEC14L6B5MCN3 397 aa15.87■□□□□ 0.13
PDLIM4-206ENST00000474421 OR8U8P0C7N1 319 aa15.87■□□□□ 0.13
PDLIM4-206ENST00000474421 CT45A6P0DMU7 189 aa15.87■□□□□ 0.13
PDLIM4-206ENST00000474421 CT45A5P0DMU8 189 aa15.87■□□□□ 0.13
PDLIM4-206ENST00000474421 CT45A7P0DMV0 189 aa15.87■□□□□ 0.13
PDLIM4-206ENST00000474421 LUMP51884 338 aaPredicted RBP15.87■□□□□ 0.13
PDLIM4-206ENST00000474421 RPS25P62851 125 aaKnown RBP15.87■□□□□ 0.13
PDLIM4-206ENST00000474421 HLA-DRB3P79483 266 aa15.87■□□□□ 0.13
PDLIM4-206ENST00000474421 PRSS48Q7RTY5 328 aa15.87■□□□□ 0.13
PDLIM4-206ENST00000474421 TCTEX1D1Q8N7M0 179 aa15.87■□□□□ 0.13
PDLIM4-206ENST00000474421 ZNF491Q8N8L2 437 aa15.87■□□□□ 0.13
PDLIM4-206ENST00000474421 NRG4Q8WWG1 115 aa15.87■□□□□ 0.13
PDLIM4-206ENST00000474421 RNF5Q99942 180 aa15.87■□□□□ 0.13
PDLIM4-206ENST00000474421 ACOT13Q9NPJ3 140 aa15.87■□□□□ 0.13
PDLIM4-206ENST00000474421 WASHC3Q9Y3C0 194 aa15.87■□□□□ 0.13
PDLIM4-206ENST00000474421 ERICH4A6NGS2 130 aa15.86■□□□□ 0.13
PDLIM4-206ENST00000474421 RRHO14718 337 aa15.86■□□□□ 0.13
PDLIM4-206ENST00000474421 GSTP1P09211 210 aaKnown RBP15.86■□□□□ 0.13
PDLIM4-206ENST00000474421 CALRP27797 417 aaKnown RBP15.86■□□□□ 0.13
PDLIM4-206ENST00000474421 CEACAM6P40199 344 aa15.86■□□□□ 0.13
PDLIM4-206ENST00000474421 RAB9AP51151 201 aa15.86■□□□□ 0.13
PDLIM4-206ENST00000474421 PLGLAQ15195 96 aa15.86■□□□□ 0.13
PDLIM4-206ENST00000474421 RPL39P5Q59GN2 51 aa15.86■□□□□ 0.13
PDLIM4-206ENST00000474421 MINDY2Q8NBR6 621 aa15.86■□□□□ 0.13
PDLIM4-206ENST00000474421 OR56B1Q8NGI3 324 aa15.86■□□□□ 0.13
PDLIM4-206ENST00000474421 GFI1Q99684 422 aa15.86■□□□□ 0.13
PDLIM4-206ENST00000474421 AGMATQ9BSE5 352 aa15.86■□□□□ 0.13
PDLIM4-206ENST00000474421 KLK15Q9H2R5 256 aa15.86■□□□□ 0.13
PDLIM4-206ENST00000474421 Q9N2K0 584 aa15.86■□□□□ 0.13
PDLIM4-206ENST00000474421 FOXI3A8MTJ6 420 aaPredicted RBP15.85■□□□□ 0.13
PDLIM4-206ENST00000474421 H0YJW9 148 aa15.85■□□□□ 0.13
PDLIM4-206ENST00000474421 H7C2Y5 167 aa15.85■□□□□ 0.13
PDLIM4-206ENST00000474421 CRHBPP24387 322 aa15.85■□□□□ 0.13
PDLIM4-206ENST00000474421 INSL3P51460 131 aa15.85■□□□□ 0.13
PDLIM4-206ENST00000474421 CRIP2P52943 208 aaPredicted RBP15.85■□□□□ 0.13
PDLIM4-206ENST00000474421 ZNF616Q08AN1 781 aa15.85■□□□□ 0.13
PDLIM4-206ENST00000474421 TMEM267Q0VDI3 215 aaPredicted RBP15.85■□□□□ 0.13
PDLIM4-206ENST00000474421 KIAA0141Q14154 515 aaPredicted RBP15.85■□□□□ 0.13
PDLIM4-206ENST00000474421 OR5AN1Q8NGI8 311 aa15.85■□□□□ 0.13
PDLIM4-206ENST00000474421 OR1N2Q8NGR9 330 aa15.85■□□□□ 0.13
PDLIM4-206ENST00000474421 PTX4Q96A99 478 aa15.85■□□□□ 0.13
PDLIM4-206ENST00000474421 FAM3DQ96BQ1 224 aa15.85■□□□□ 0.13
PDLIM4-206ENST00000474421 ARHGAP5-AS1Q96IT6 56 aa15.85■□□□□ 0.13
PDLIM4-206ENST00000474421 ABHD14BQ96IU4 210 aa15.85■□□□□ 0.13
PDLIM4-206ENST00000474421 MGLLQ99685 303 aa15.85■□□□□ 0.13
PDLIM4-206ENST00000474421 CMSS1Q9BQ75 279 aaKnown RBP15.85■□□□□ 0.13
PDLIM4-206ENST00000474421 HDHD3Q9BSH5 251 aaPredicted RBP15.85■□□□□ 0.13
PDLIM4-206ENST00000474421 C11orf54Q9H0W9 315 aaPredicted RBP15.85■□□□□ 0.13
PDLIM4-206ENST00000474421 V9GY05 133 aa15.85■□□□□ 0.13
PDLIM4-206ENST00000474421 I3L521 148 aa15.84■□□□□ 0.13
PDLIM4-206ENST00000474421 VEGFCP49767 419 aa15.84■□□□□ 0.13
PDLIM4-206ENST00000474421 C11orf87Q6NUJ2 197 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms