RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 VAMP5O95183 116 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 IGKV1D-12P01611 117 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 CD74P04233 296 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 P04436 131 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 KLK3P07288 261 aaPredicted RBP1.08□□□□□ -2.24
CCDC39-203ENST00000473854 CST2P09228 141 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 TACSTD2P09758 323 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 H2BFMP0C1H6 154 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 P0C879 139 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 ZNF735P0CB33 412 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 SULT1A3P0DMM9 295 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 SULT1A4P0DMN0 295 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 CALCBP10092 127 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 CCL2P13500 99 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 GABRA1P14867 456 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 ZNF823P16415 610 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 ZNF43P17038 809 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 PTBP1P26599 531 aaKnown RBP eCLIP1.08□□□□□ -2.24
CCDC39-203ENST00000473854 MAPK3P27361 379 aaPredicted RBP1.08□□□□□ -2.24
CCDC39-203ENST00000473854 CD82P27701 267 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 HTR2CP28335 458 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 HSD11B1P28845 292 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 AGTR1P30556 359 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 RBMXP38159 391 aaKnown RBP1.08□□□□□ -2.24
CCDC39-203ENST00000473854 NBL1P41271 181 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 HTR5AP47898 357 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 NPBWR1P48145 328 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 PITPNBP48739 271 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 CYB561P49447 251 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 TNFSF10P50591 281 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 BLVRAP53004 296 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 RAB25P57735 213 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 LINC00315P59091 139 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 DEFA1P59665 94 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 DEFA3P59666 94 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 UBE2MP61081 183 aaKnown RBP1.08□□□□□ -2.24
CCDC39-203ENST00000473854 RRAS2P62070 204 aaPredicted RBP1.08□□□□□ -2.24
CCDC39-203ENST00000473854 LSM6P62312 80 aaKnown RBP1.08□□□□□ -2.24
CCDC39-203ENST00000473854 SNRPD2P62316 118 aaKnown RBP1.08□□□□□ -2.24
CCDC39-203ENST00000473854 SLC35A1P78382 337 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 PSG4Q00888 419 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 NAAAQ02083 359 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 OC90Q02509 493 aaPredicted RBP1.08□□□□□ -2.24
CCDC39-203ENST00000473854 ZNF92Q03936 586 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 SCN1BQ07699 218 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 MRPL28Q13084 256 aaKnown RBP1.08□□□□□ -2.24
CCDC39-203ENST00000473854 CBX3Q13185 183 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 EIF3IQ13347 325 aaKnown RBP1.08□□□□□ -2.24
CCDC39-203ENST00000473854 RAB35Q15286 201 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 TSC22D1Q15714 1073 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 UBE2V2Q15819 145 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 KCNJ8Q15842 424 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 RAB11BQ15907 218 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 BCL2A1Q16548 175 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 GSG1Q2KHT4 349 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 CEACAM16Q2WEN9 425 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 C2orf76Q3KRA6 126 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 HIKESHIQ53FT3 197 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 TMEM69Q5SWH9 247 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 GLYATL3Q5SZD4 288 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 THEM4Q5T1C6 240 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 TSPO2Q5TGU0 170 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 C9orf135Q5VTT2 229 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 TMEM244Q5VVB8 128 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 SLC22A10Q63ZE4 541 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 ZNF57Q68EA5 555 aaPredicted RBP1.08□□□□□ -2.24
CCDC39-203ENST00000473854 OR52W1Q6IF63 320 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 ZNF544Q6NX49 715 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 DEGS2Q6QHC5 323 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 PET117Q6UWS5 81 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 SIGLEC15Q6ZMC9 328 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 RFPL4BQ6ZWI9 263 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 ASCL5Q7RTU5 278 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 ABHD12BQ7Z5M8 362 aaPredicted RBP1.08□□□□□ -2.24
CCDC39-203ENST00000473854 WDR86Q86TI4 376 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 TPRA1Q86W33 373 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 RAB43Q86YS6 212 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 SKA3Q8IX90 412 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 TUSC5Q8IXB3 177 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 ELMOD2Q8IZ81 293 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 ZNF101Q8IZC7 436 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 TCTE3Q8IZS6 198 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 OR8H3Q8N146 312 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 BATF2Q8N1L9 274 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 LRRC18Q8N456 261 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 C9orf62Q8N4C0 152 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 RPRMLQ8N4K4 120 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 JAGN1Q8N5M9 183 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 MS4A15Q8N5U1 240 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 GVQW1Q8N7I0 195 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 ZNF283Q8N7M2 679 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 NKAIN3Q8N8D7 197 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 ZFP62Q8NB50 900 aaPredicted RBP1.08□□□□□ -2.24
CCDC39-203ENST00000473854 CLEC1AQ8NC01 280 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 ACBD4Q8NC06 268 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 C19orf18Q8NEA5 215 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 DUSP18Q8NEJ0 188 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 BEST4Q8NFU0 473 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 FDCSPQ8NFU4 85 aa1.08□□□□□ -2.24
CCDC39-203ENST00000473854 OR1M1Q8NGA1 313 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms