RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 Q6ZS49 121 aa10.52□□□□□ -0.73
TPM3-216ENST00000473036 Q6ZSV7 163 aa10.52□□□□□ -0.73
TPM3-216ENST00000473036 SLC25A48Q6ZT89 311 aaKnown RBP10.52□□□□□ -0.73
TPM3-216ENST00000473036 TMEM219Q86XT9 240 aa10.52□□□□□ -0.73
TPM3-216ENST00000473036 SNX29P2Q8IUI4 249 aa10.52□□□□□ -0.73
TPM3-216ENST00000473036 ODF3L1Q8IXM7 274 aa10.52□□□□□ -0.73
TPM3-216ENST00000473036 OR5R1Q8NH85 324 aa10.52□□□□□ -0.73
TPM3-216ENST00000473036 SETD6Q8TBK2 473 aa10.52□□□□□ -0.73
TPM3-216ENST00000473036 SMIM4Q8WVI0 70 aa10.52□□□□□ -0.73
TPM3-216ENST00000473036 MAFIPQ8WZ33 124 aa10.52□□□□□ -0.73
TPM3-216ENST00000473036 CFHR4Q92496 578 aa10.52□□□□□ -0.73
TPM3-216ENST00000473036 AKIP1Q9NQ31 210 aa10.52□□□□□ -0.73
TPM3-216ENST00000473036 IFT46Q9NQC8 304 aa10.52□□□□□ -0.73
TPM3-216ENST00000473036 ZNF230Q9UIE0 474 aaPredicted RBP10.52□□□□□ -0.73
TPM3-216ENST00000473036 TCF19Q9Y242 345 aa10.52□□□□□ -0.73
TPM3-216ENST00000473036 TMEM235A6NFC5 223 aa10.51□□□□□ -0.73
TPM3-216ENST00000473036 SSX5O60225 188 aa10.51□□□□□ -0.73
TPM3-216ENST00000473036 DIRAS3O95661 229 aa10.51□□□□□ -0.73
TPM3-216ENST00000473036 CSF1P09603 554 aa10.51□□□□□ -0.73
TPM3-216ENST00000473036 CTXN2P0C2S0 81 aa10.51□□□□□ -0.73
TPM3-216ENST00000473036 TBPP20226 339 aa10.51□□□□□ -0.73
TPM3-216ENST00000473036 PRRX1P54821 245 aa10.51□□□□□ -0.73
TPM3-216ENST00000473036 HTD2P86397 168 aa10.51□□□□□ -0.73
TPM3-216ENST00000473036 ACTBL2Q562R1 376 aa10.51□□□□□ -0.73
TPM3-216ENST00000473036 Q6ZS46 218 aa10.51□□□□□ -0.73
TPM3-216ENST00000473036 C8orf31Q8N9H6 132 aa10.51□□□□□ -0.73
TPM3-216ENST00000473036 GPX8Q8TED1 209 aa10.51□□□□□ -0.73
TPM3-216ENST00000473036 ABHD1Q96SE0 405 aa10.51□□□□□ -0.73
TPM3-216ENST00000473036 THAP7Q9BT49 309 aaPredicted RBP10.51□□□□□ -0.73
TPM3-216ENST00000473036 OR2S2Q9NQN1 319 aa10.51□□□□□ -0.73
TPM3-216ENST00000473036 OR1A1Q9P1Q5 309 aa10.51□□□□□ -0.73
TPM3-216ENST00000473036 V9GYH0 126 aa10.51□□□□□ -0.73
TPM3-216ENST00000473036 FAM90A9PA6NNJ1 464 aa10.5□□□□□ -0.73
TPM3-216ENST00000473036 NDUFA7O95182 113 aa10.5□□□□□ -0.73
TPM3-216ENST00000473036 FCGR3AP08637 254 aa10.5□□□□□ -0.73
TPM3-216ENST00000473036 PTHLHP12272 177 aa10.5□□□□□ -0.73
TPM3-216ENST00000473036 RCVRNP35243 200 aa10.5□□□□□ -0.73
TPM3-216ENST00000473036 FAUP35544 74 aaKnown RBP10.5□□□□□ -0.73
TPM3-216ENST00000473036 REG1BP48304 166 aa10.5□□□□□ -0.73
TPM3-216ENST00000473036 TAS2R46P59540 309 aa10.5□□□□□ -0.73
TPM3-216ENST00000473036 KRTAP10-3P60369 221 aa10.5□□□□□ -0.73
TPM3-216ENST00000473036 HLA-DRB3P79483 266 aa10.5□□□□□ -0.73
TPM3-216ENST00000473036 TRIQKQ629K1 86 aa10.5□□□□□ -0.73
TPM3-216ENST00000473036 IZUMO1Q8IYV9 350 aa10.5□□□□□ -0.73
TPM3-216ENST00000473036 DTX3Q8N9I9 347 aa10.5□□□□□ -0.73
TPM3-216ENST00000473036 PALMDQ9NP74 551 aa10.5□□□□□ -0.73
TPM3-216ENST00000473036 GNG12Q9UBI6 72 aa10.5□□□□□ -0.73
TPM3-216ENST00000473036 MTFP1Q9UDX5 166 aa10.5□□□□□ -0.73
TPM3-216ENST00000473036 JPT1Q9UK76 154 aa10.5□□□□□ -0.73
TPM3-216ENST00000473036 CENPXA8MT69 81 aa10.49□□□□□ -0.73
TPM3-216ENST00000473036 ZNF736B4DX44 427 aaPredicted RBP10.49□□□□□ -0.73
TPM3-216ENST00000473036 TIMM23O14925 209 aa10.49□□□□□ -0.73
TPM3-216ENST00000473036 YPEL1O60688 119 aa10.49□□□□□ -0.73
TPM3-216ENST00000473036 GSTT2P0CG29 244 aa10.49□□□□□ -0.73
TPM3-216ENST00000473036 ZNF137PP52743 207 aa10.49□□□□□ -0.73
TPM3-216ENST00000473036 RAG2P55895 527 aa10.49□□□□□ -0.73
TPM3-216ENST00000473036 SRSF4Q08170 494 aaKnown RBP10.49□□□□□ -0.73
TPM3-216ENST00000473036 MADCAM1Q13477 382 aa10.49□□□□□ -0.73
TPM3-216ENST00000473036 Q3ZCU0 254 aa10.49□□□□□ -0.73
TPM3-216ENST00000473036 IGSF11Q5DX21 431 aa10.49□□□□□ -0.73
TPM3-216ENST00000473036 HOGA1Q86XE5 327 aa10.49□□□□□ -0.73
TPM3-216ENST00000473036 MFSD4AQ8N468 514 aa10.49□□□□□ -0.73
TPM3-216ENST00000473036 DRAM1Q8N682 238 aa10.49□□□□□ -0.73
TPM3-216ENST00000473036 OR10X1Q8NGY0 326 aa10.49□□□□□ -0.73
TPM3-216ENST00000473036 NUDCD2Q8WVJ2 157 aa10.49□□□□□ -0.73
TPM3-216ENST00000473036 IL1F10Q8WWZ1 152 aa10.49□□□□□ -0.73
TPM3-216ENST00000473036 BORCS5Q969J3 196 aa10.49□□□□□ -0.73
TPM3-216ENST00000473036 GALMQ96C23 342 aa10.49□□□□□ -0.73
TPM3-216ENST00000473036 YPEL2Q96QA6 119 aa10.49□□□□□ -0.73
TPM3-216ENST00000473036 SRRQ9GZT4 340 aa10.49□□□□□ -0.73
TPM3-216ENST00000473036 IFI27L2Q9H2X8 130 aa10.49□□□□□ -0.73
TPM3-216ENST00000473036 SIGLEC9Q9Y336 463 aa10.49□□□□□ -0.73
TPM3-216ENST00000473036 NOTCH1P46531 2555 aa10.48□□□□□ -0.73
TPM3-216ENST00000473036 TRDCB7Z8K6 153 aa10.48□□□□□ -0.73
TPM3-216ENST00000473036 HSD17B6O14756 317 aa10.48□□□□□ -0.73
TPM3-216ENST00000473036 TSPAN9O75954 239 aa10.48□□□□□ -0.73
TPM3-216ENST00000473036 AMY1AP04745 511 aa10.48□□□□□ -0.73
TPM3-216ENST00000473036 AMY2AP04746 511 aa10.48□□□□□ -0.73
TPM3-216ENST00000473036 NAT1P18440 290 aa10.48□□□□□ -0.73
TPM3-216ENST00000473036 OR3A3P47888 321 aa10.48□□□□□ -0.73
TPM3-216ENST00000473036 TAS2R19P59542 299 aa10.48□□□□□ -0.73
TPM3-216ENST00000473036 BLCAPP62952 87 aa10.48□□□□□ -0.73
TPM3-216ENST00000473036 ZNF816Q0VGE8 651 aaPredicted RBP10.48□□□□□ -0.73
TPM3-216ENST00000473036 HABP2Q14520 560 aaPredicted RBP10.48□□□□□ -0.73
TPM3-216ENST00000473036 LY6G6FQ5SQ64 297 aa10.48□□□□□ -0.73
TPM3-216ENST00000473036 TMEM17Q86X19 198 aa10.48□□□□□ -0.73
TPM3-216ENST00000473036 TOMM5Q8N4H5 51 aa10.48□□□□□ -0.73
TPM3-216ENST00000473036 OR4A4PQ8NGN8 299 aa10.48□□□□□ -0.73
TPM3-216ENST00000473036 OR56B4Q8NH76 319 aa10.48□□□□□ -0.73
TPM3-216ENST00000473036 LINC01006Q8NI28 216 aa10.48□□□□□ -0.73
TPM3-216ENST00000473036 RTN4IP1Q8WWV3 396 aaPredicted RBP10.48□□□□□ -0.73
TPM3-216ENST00000473036 TOMM40LQ969M1 308 aa10.48□□□□□ -0.73
TPM3-216ENST00000473036 ZNF251Q9BRH9 671 aa10.48□□□□□ -0.73
TPM3-216ENST00000473036 C7orf50Q9BRJ6 194 aaKnown RBP10.48□□□□□ -0.73
TPM3-216ENST00000473036 AGMATQ9BSE5 352 aa10.48□□□□□ -0.73
TPM3-216ENST00000473036 ST6GALNAC5Q9BVH7 336 aa10.48□□□□□ -0.73
TPM3-216ENST00000473036 RBMX2Q9Y388 322 aaKnown RBP10.48□□□□□ -0.73
TPM3-216ENST00000473036 IGHV3-72A0A0B4J1Y9 119 aa10.47□□□□□ -0.73
TPM3-216ENST00000473036 IGHV1-3A0A0C4DH29 117 aa10.47□□□□□ -0.73
TPM3-216ENST00000473036 A0A1B0GUS0 222 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms