RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 FAM71F2Q6NXP2 309 aa16.69■□□□□ 0.26
TOP3A-204ENST00000472959 MOB3BQ86TA1 216 aa16.69■□□□□ 0.26
TOP3A-204ENST00000472959 ODF3L1Q8IXM7 274 aa16.69■□□□□ 0.26
TOP3A-204ENST00000472959 BEST4Q8NFU0 473 aa16.69■□□□□ 0.26
TOP3A-204ENST00000472959 OR56B4Q8NH76 319 aa16.69■□□□□ 0.26
TOP3A-204ENST00000472959 C15orf40Q8WUR7 153 aa16.69■□□□□ 0.26
TOP3A-204ENST00000472959 CFHR4Q92496 578 aa16.69■□□□□ 0.26
TOP3A-204ENST00000472959 PARP12Q9H0J9 701 aaKnown RBP16.69■□□□□ 0.26
TOP3A-204ENST00000472959 SCPEP1Q9HB40 452 aa16.69■□□□□ 0.26
TOP3A-204ENST00000472959 C1RLQ9NZP8 487 aa16.69■□□□□ 0.26
TOP3A-204ENST00000472959 COL6A5A8TX70 2615 aa16.69■□□□□ 0.26
TOP3A-204ENST00000472959 NDUFA7O95182 113 aa16.68■□□□□ 0.26
TOP3A-204ENST00000472959 FOXL1Q12952 345 aa16.68■□□□□ 0.26
TOP3A-204ENST00000472959 CCBE1Q6UXH8 406 aaPredicted RBP16.68■□□□□ 0.26
TOP3A-204ENST00000472959 ZNF833PQ6ZTB9 187 aa16.68■□□□□ 0.26
TOP3A-204ENST00000472959 GVQW1Q8N7I0 195 aa16.68■□□□□ 0.26
TOP3A-204ENST00000472959 CAPSLQ8WWF8 208 aa16.68■□□□□ 0.26
TOP3A-204ENST00000472959 S1PR3Q99500 378 aa16.68■□□□□ 0.26
TOP3A-204ENST00000472959 NXF2Q9GZY0 626 aaKnown RBP16.68■□□□□ 0.26
TOP3A-204ENST00000472959 MIXL1Q9H2W2 232 aa16.68■□□□□ 0.26
TOP3A-204ENST00000472959 IFT46Q9NQC8 304 aa16.68■□□□□ 0.26
TOP3A-204ENST00000472959 EXTL2Q9UBQ6 330 aa16.68■□□□□ 0.26
TOP3A-204ENST00000472959 SAA2-SAA4A0A096LPE2 208 aa16.67■□□□□ 0.26
TOP3A-204ENST00000472959 SAA2P0DJI9 122 aaPredicted RBP16.67■□□□□ 0.26
TOP3A-204ENST00000472959 CD24P25063 80 aa16.67■□□□□ 0.26
TOP3A-204ENST00000472959 C16orf82Q7Z2V1 217 aa16.67■□□□□ 0.26
TOP3A-204ENST00000472959 H1FOOQ8IZA3 346 aaPredicted RBP16.67■□□□□ 0.26
TOP3A-204ENST00000472959 MCFD2Q8NI22 146 aa16.67■□□□□ 0.26
TOP3A-204ENST00000472959 DGCR14Q96DF8 476 aaKnown RBP16.67■□□□□ 0.26
TOP3A-204ENST00000472959 AKR1E2Q96JD6 320 aa16.67■□□□□ 0.26
TOP3A-204ENST00000472959 C6orf62Q9GZU0 229 aaPredicted RBP16.67■□□□□ 0.26
TOP3A-204ENST00000472959 ZNF221Q9UK13 617 aa16.67■□□□□ 0.26
TOP3A-204ENST00000472959 SULT1C2O00338 296 aa16.66■□□□□ 0.26
TOP3A-204ENST00000472959 CHST1O43916 411 aa16.66■□□□□ 0.26
TOP3A-204ENST00000472959 CD1BP29016 333 aa16.66■□□□□ 0.26
TOP3A-204ENST00000472959 OR3A3P47888 321 aa16.66■□□□□ 0.26
TOP3A-204ENST00000472959 COMPP49747 757 aaPredicted RBP16.66■□□□□ 0.26
TOP3A-204ENST00000472959 ARPC4P59998 168 aa16.66■□□□□ 0.26
TOP3A-204ENST00000472959 TMEM219Q86XT9 240 aa16.66■□□□□ 0.26
TOP3A-204ENST00000472959 SNX29P2Q8IUI4 249 aa16.66■□□□□ 0.26
TOP3A-204ENST00000472959 LAX1Q8IWV1 398 aa16.66■□□□□ 0.26
TOP3A-204ENST00000472959 OR4F5Q8NH21 305 aa16.66■□□□□ 0.26
TOP3A-204ENST00000472959 GPX8Q8TED1 209 aa16.66■□□□□ 0.26
TOP3A-204ENST00000472959 ABHD14BQ96IU4 210 aa16.66■□□□□ 0.26
TOP3A-204ENST00000472959 NPFFR1Q9GZQ6 430 aa16.66■□□□□ 0.26
TOP3A-204ENST00000472959 RABL2AQ9UBK7 228 aaPredicted RBP16.66■□□□□ 0.26
TOP3A-204ENST00000472959 ANAPC10Q9UM13 185 aa16.66■□□□□ 0.26
TOP3A-204ENST00000472959 RABL2BQ9UNT1 228 aa16.66■□□□□ 0.26
TOP3A-204ENST00000472959 SNRNP70P08621 437 aaKnown RBP16.65■□□□□ 0.26
TOP3A-204ENST00000472959 OR8U9P0C7N5 309 aa16.65■□□□□ 0.26
TOP3A-204ENST00000472959 RAG2P55895 527 aa16.65■□□□□ 0.26
TOP3A-204ENST00000472959 RELBQ01201 579 aa16.65■□□□□ 0.26
TOP3A-204ENST00000472959 EBI3Q14213 229 aa16.65■□□□□ 0.26
TOP3A-204ENST00000472959 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.65■□□□□ 0.26
TOP3A-204ENST00000472959 OR8U1Q8NH10 309 aa16.65■□□□□ 0.26
TOP3A-204ENST00000472959 SNAPC3Q92966 411 aa16.65■□□□□ 0.26
TOP3A-204ENST00000472959 RBM14Q96PK6 669 aaKnown RBP16.65■□□□□ 0.26
TOP3A-204ENST00000472959 ZNF251Q9BRH9 671 aa16.65■□□□□ 0.26
TOP3A-204ENST00000472959 DCUN1D5Q9BTE7 237 aa16.65■□□□□ 0.26
TOP3A-204ENST00000472959 RANBP3Q9H6Z4 567 aaPredicted RBP16.65■□□□□ 0.26
TOP3A-204ENST00000472959 NECAP2Q9NVZ3 263 aa16.65■□□□□ 0.26
TOP3A-204ENST00000472959 RNF150Q9ULK6 438 aa16.65■□□□□ 0.26
TOP3A-204ENST00000472959 GAB2Q9UQC2 676 aa16.65■□□□□ 0.26
TOP3A-204ENST00000472959 A3GALT2U3KPV4 340 aa16.65■□□□□ 0.26
TOP3A-204ENST00000472959 A0A1B0GUS0 222 aa16.64■□□□□ 0.25
TOP3A-204ENST00000472959 DPPA5A6NC42 116 aa16.64■□□□□ 0.25
TOP3A-204ENST00000472959 MEIS3P1A6NDR6 274 aa16.64■□□□□ 0.25
TOP3A-204ENST00000472959 TSPAN9O75954 239 aa16.64■□□□□ 0.25
TOP3A-204ENST00000472959 OR2F2O95006 317 aa16.64■□□□□ 0.25
TOP3A-204ENST00000472959 NAT1P18440 290 aa16.64■□□□□ 0.25
TOP3A-204ENST00000472959 GPR12P47775 334 aa16.64■□□□□ 0.25
TOP3A-204ENST00000472959 HES1Q14469 280 aa16.64■□□□□ 0.25
TOP3A-204ENST00000472959 OR5AP2Q8NGF4 316 aa16.64■□□□□ 0.25
TOP3A-204ENST00000472959 OR4C13Q8NGP0 309 aa16.64■□□□□ 0.25
TOP3A-204ENST00000472959 DIRAS2Q96HU8 199 aa16.64■□□□□ 0.25
TOP3A-204ENST00000472959 MMP27Q9H306 513 aa16.64■□□□□ 0.25
TOP3A-204ENST00000472959 OR2W1Q9Y3N9 320 aa16.64■□□□□ 0.25
TOP3A-204ENST00000472959 IGHV3-72A0A0B4J1Y9 119 aa16.63■□□□□ 0.25
TOP3A-204ENST00000472959 M0QZK8 103 aa16.63■□□□□ 0.25
TOP3A-204ENST00000472959 IGKV1D-33P01593 117 aa16.63■□□□□ 0.25
TOP3A-204ENST00000472959 IGKV1-33P01594 117 aa16.63■□□□□ 0.25
TOP3A-204ENST00000472959 LSAMPQ13449 338 aa16.63■□□□□ 0.25
TOP3A-204ENST00000472959 RPL39P5Q59GN2 51 aa16.63■□□□□ 0.25
TOP3A-204ENST00000472959 Q6ZSV7 163 aa16.63■□□□□ 0.25
TOP3A-204ENST00000472959 OR2T10Q8NGZ9 312 aa16.63■□□□□ 0.25
TOP3A-204ENST00000472959 SPATA3Q8NHX4 192 aa16.63■□□□□ 0.25
TOP3A-204ENST00000472959 NABP2Q9BQ15 211 aa16.63■□□□□ 0.25
TOP3A-204ENST00000472959 SLC25A33Q9BSK2 321 aa16.63■□□□□ 0.25
TOP3A-204ENST00000472959 MRPL20Q9BYC9 149 aaKnown RBP16.63■□□□□ 0.25
TOP3A-204ENST00000472959 C16orf95Q9H693 158 aa16.63■□□□□ 0.25
TOP3A-204ENST00000472959 BEX1Q9HBH7 125 aa16.63■□□□□ 0.25
TOP3A-204ENST00000472959 RBM7Q9Y580 266 aaKnown RBP16.63■□□□□ 0.25
TOP3A-204ENST00000472959 MMP24Q9Y5R2 645 aa16.63■□□□□ 0.25
TOP3A-204ENST00000472959 FCER2P06734 321 aa16.62■□□□□ 0.25
TOP3A-204ENST00000472959 TMEM11P17152 192 aa16.62■□□□□ 0.25
TOP3A-204ENST00000472959 NFYAP23511 347 aaPredicted RBP16.62■□□□□ 0.25
TOP3A-204ENST00000472959 TAS2R46P59540 309 aa16.62■□□□□ 0.25
TOP3A-204ENST00000472959 AWAT1Q58HT5 328 aa16.62■□□□□ 0.25
TOP3A-204ENST00000472959 TAF15Q92804 592 aaKnown RBP eCLIP16.62■□□□□ 0.25
TOP3A-204ENST00000472959 EAF1Q96JC9 268 aaPredicted RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms