RNA–Protein interactions for RNA: ENST00000472224.1

CLRN1-205, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 606 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-205ENST00000472224 OR13F1Q8NGS4 319 aa9.47□□□□□ -0.89
CLRN1-205ENST00000472224 NUDCD2Q8WVJ2 157 aa9.47□□□□□ -0.89
CLRN1-205ENST00000472224 SLC25A38Q96DW6 304 aa9.47□□□□□ -0.89
CLRN1-205ENST00000472224 MRPL20Q9BYC9 149 aaKnown RBP9.47□□□□□ -0.89
CLRN1-205ENST00000472224 IFI27L2Q9H2X8 130 aa9.47□□□□□ -0.89
CLRN1-205ENST00000472224 ETV7Q9Y603 341 aa9.47□□□□□ -0.89
CLRN1-205ENST00000472224 SAA2-SAA4A0A096LPE2 208 aa9.46□□□□□ -0.9
CLRN1-205ENST00000472224 FAM90A9PA6NNJ1 464 aa9.46□□□□□ -0.9
CLRN1-205ENST00000472224 NCBP2LA6PVI3 153 aaKnown RBP9.46□□□□□ -0.9
CLRN1-205ENST00000472224 ZNF736B4DX44 427 aaPredicted RBP9.46□□□□□ -0.9
CLRN1-205ENST00000472224 FABP7O15540 132 aa9.46□□□□□ -0.9
CLRN1-205ENST00000472224 LANCL1O43813 399 aa9.46□□□□□ -0.9
CLRN1-205ENST00000472224 SCGNO76038 276 aa9.46□□□□□ -0.9
CLRN1-205ENST00000472224 SAA2P0DJI9 122 aaPredicted RBP9.46□□□□□ -0.9
CLRN1-205ENST00000472224 CEACAM6P40199 344 aa9.46□□□□□ -0.9
CLRN1-205ENST00000472224 ZNF137PP52743 207 aa9.46□□□□□ -0.9
CLRN1-205ENST00000472224 GNG2P59768 71 aa9.46□□□□□ -0.9
CLRN1-205ENST00000472224 KIR2DS1Q14954 304 aa9.46□□□□□ -0.9
CLRN1-205ENST00000472224 ARL6IP1Q15041 203 aa9.46□□□□□ -0.9
CLRN1-205ENST00000472224 C11orf88Q6PI97 169 aa9.46□□□□□ -0.9
CLRN1-205ENST00000472224 THNSL2Q86YJ6 484 aa9.46□□□□□ -0.9
CLRN1-205ENST00000472224 DTX3Q8N9I9 347 aa9.46□□□□□ -0.9
CLRN1-205ENST00000472224 ST6GALNAC6Q969X2 333 aa9.46□□□□□ -0.9
CLRN1-205ENST00000472224 RBMXL1Q96E39 390 aaKnown RBP9.46□□□□□ -0.9
CLRN1-205ENST00000472224 CITED1Q99966 193 aa9.46□□□□□ -0.9
CLRN1-205ENST00000472224 GINS4Q9BRT9 223 aa9.46□□□□□ -0.9
CLRN1-205ENST00000472224 TRAV18A0A075B6X5 111 aa9.45□□□□□ -0.9
CLRN1-205ENST00000472224 IGKV1-6A0A0C4DH72 117 aa9.45□□□□□ -0.9
CLRN1-205ENST00000472224 M0QZK8 103 aa9.45□□□□□ -0.9
CLRN1-205ENST00000472224 GSTT2P0CG29 244 aa9.45□□□□□ -0.9
CLRN1-205ENST00000472224 GSTT2BP0CG30 244 aa9.45□□□□□ -0.9
CLRN1-205ENST00000472224 RPS19P39019 145 aaKnown RBP9.45□□□□□ -0.9
CLRN1-205ENST00000472224 SCAND1P57086 179 aa9.45□□□□□ -0.9
CLRN1-205ENST00000472224 LSAMPQ13449 338 aa9.45□□□□□ -0.9
CLRN1-205ENST00000472224 RPL39P5Q59GN2 51 aa9.45□□□□□ -0.9
CLRN1-205ENST00000472224 IGSF11Q5DX21 431 aa9.45□□□□□ -0.9
CLRN1-205ENST00000472224 GPR107Q5VW38 600 aa9.45□□□□□ -0.9
CLRN1-205ENST00000472224 HACD4Q5VWC8 232 aa9.45□□□□□ -0.9
CLRN1-205ENST00000472224 GPR141Q7Z602 305 aa9.45□□□□□ -0.9
CLRN1-205ENST00000472224 CROCCP3Q8IVE0 287 aa9.45□□□□□ -0.9
CLRN1-205ENST00000472224 ODF3L1Q8IXM7 274 aa9.45□□□□□ -0.9
CLRN1-205ENST00000472224 Q8N2B8 174 aa9.45□□□□□ -0.9
CLRN1-205ENST00000472224 OR4A4PQ8NGN8 299 aa9.45□□□□□ -0.9
CLRN1-205ENST00000472224 OR2T10Q8NGZ9 312 aa9.45□□□□□ -0.9
CLRN1-205ENST00000472224 EDARADDQ8WWZ3 215 aa9.45□□□□□ -0.9
CLRN1-205ENST00000472224 ABHD14BQ96IU4 210 aa9.45□□□□□ -0.9
CLRN1-205ENST00000472224 EAF1Q96JC9 268 aaPredicted RBP9.45□□□□□ -0.9
CLRN1-205ENST00000472224 ST6GALNAC5Q9BVH7 336 aa9.45□□□□□ -0.9
CLRN1-205ENST00000472224 NAA50Q9GZZ1 169 aaKnown RBP9.45□□□□□ -0.9
CLRN1-205ENST00000472224 MMP27Q9H306 513 aa9.45□□□□□ -0.9
CLRN1-205ENST00000472224 SERTAD4Q9NUC0 356 aa9.45□□□□□ -0.9
CLRN1-205ENST00000472224 SPATA2Q9UM82 520 aa9.45□□□□□ -0.9
CLRN1-205ENST00000472224 RAB29O14966 203 aa9.44□□□□□ -0.9
CLRN1-205ENST00000472224 MOSP00540 346 aa9.44□□□□□ -0.9
CLRN1-205ENST00000472224 GSTP1P09211 210 aaKnown RBP9.44□□□□□ -0.9
CLRN1-205ENST00000472224 DTYMKP23919 212 aa9.44□□□□□ -0.9
CLRN1-205ENST00000472224 CD1BP29016 333 aa9.44□□□□□ -0.9
CLRN1-205ENST00000472224 GPR12P47775 334 aa9.44□□□□□ -0.9
CLRN1-205ENST00000472224 HERPUD1Q15011 391 aa9.44□□□□□ -0.9
CLRN1-205ENST00000472224 ZNF260Q3ZCT1 412 aa9.44□□□□□ -0.9
CLRN1-205ENST00000472224 ZNF833PQ6ZTB9 187 aa9.44□□□□□ -0.9
CLRN1-205ENST00000472224 C5orf56Q8N8D9 126 aa9.44□□□□□ -0.9
CLRN1-205ENST00000472224 SAMD12Q8N8I0 201 aa9.44□□□□□ -0.9
CLRN1-205ENST00000472224 OR10J5Q8NHC4 309 aa9.44□□□□□ -0.9
CLRN1-205ENST00000472224 SLC25A46Q96AG3 418 aa9.44□□□□□ -0.9
CLRN1-205ENST00000472224 S1PR3Q99500 378 aa9.44□□□□□ -0.9
CLRN1-205ENST00000472224 CABLES2Q9BTV7 478 aa9.44□□□□□ -0.9
CLRN1-205ENST00000472224 C11orf54Q9H0W9 315 aaPredicted RBP9.44□□□□□ -0.9
CLRN1-205ENST00000472224 RDH8Q9NYR8 311 aa9.44□□□□□ -0.9
CLRN1-205ENST00000472224 PIPOXQ9P0Z9 390 aa9.44□□□□□ -0.9
CLRN1-205ENST00000472224 ZNF221Q9UK13 617 aa9.44□□□□□ -0.9
CLRN1-205ENST00000472224 RNF150Q9ULK6 438 aa9.44□□□□□ -0.9
CLRN1-205ENST00000472224 RBM7Q9Y580 266 aaKnown RBP9.44□□□□□ -0.9
CLRN1-205ENST00000472224 COL7A1Q02388 2944 aa9.44□□□□□ -0.9
CLRN1-205ENST00000472224 BIRC6Q9NR09 4857 aa9.44□□□□□ -0.9
CLRN1-205ENST00000472224 M0QZ24 198 aa9.43□□□□□ -0.9
CLRN1-205ENST00000472224 FBXO24O75426 580 aa9.43□□□□□ -0.9
CLRN1-205ENST00000472224 AMY1AP04745 511 aa9.43□□□□□ -0.9
CLRN1-205ENST00000472224 AMY2AP04746 511 aa9.43□□□□□ -0.9
CLRN1-205ENST00000472224 PITPNAQ00169 270 aa9.43□□□□□ -0.9
CLRN1-205ENST00000472224 UBE2NLQ5JXB2 153 aa9.43□□□□□ -0.9
CLRN1-205ENST00000472224 LY6G6FQ5SQ64 297 aa9.43□□□□□ -0.9
CLRN1-205ENST00000472224 LCE2AQ5TA79 106 aaPredicted RBP9.43□□□□□ -0.9
CLRN1-205ENST00000472224 FAM131AQ6UXB0 335 aa9.43□□□□□ -0.9
CLRN1-205ENST00000472224 GLDNQ6ZMI3 551 aaPredicted RBP9.43□□□□□ -0.9
CLRN1-205ENST00000472224 NABP2Q9BQ15 211 aa9.43□□□□□ -0.9
CLRN1-205ENST00000472224 OR2D2Q9H210 308 aa9.43□□□□□ -0.9
CLRN1-205ENST00000472224 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.43□□□□□ -0.9
CLRN1-205ENST00000472224 DIABLOQ9NR28 239 aa9.43□□□□□ -0.9
CLRN1-205ENST00000472224 PLXNB1O43157 2135 aa9.43□□□□□ -0.9
CLRN1-205ENST00000472224 IGKV1D-8A0A087WSZ0 117 aa9.42□□□□□ -0.9
CLRN1-205ENST00000472224 MEIS3P1A6NDR6 274 aa9.42□□□□□ -0.9
CLRN1-205ENST00000472224 J3QRK9 145 aa9.42□□□□□ -0.9
CLRN1-205ENST00000472224 FGF16O43320 207 aa9.42□□□□□ -0.9
CLRN1-205ENST00000472224 SSX5O60225 188 aa9.42□□□□□ -0.9
CLRN1-205ENST00000472224 TMEM127O75204 238 aa9.42□□□□□ -0.9
CLRN1-205ENST00000472224 GABARAPO95166 117 aa9.42□□□□□ -0.9
CLRN1-205ENST00000472224 FCER2P06734 321 aa9.42□□□□□ -0.9
CLRN1-205ENST00000472224 CD28P10747 220 aa9.42□□□□□ -0.9
CLRN1-205ENST00000472224 PTHLHP12272 177 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms