RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 OR51J1Q9H342 316 aa6.26□□□□□ -1.41
USP48-207ENST00000471752 PARP11Q9NR21 331 aa6.26□□□□□ -1.41
USP48-207ENST00000471752 TPSG1Q9NRR2 321 aa6.26□□□□□ -1.41
USP48-207ENST00000471752 CNOT2Q9NZN8 540 aaKnown RBP6.26□□□□□ -1.41
USP48-207ENST00000471752 AK3Q9UIJ7 227 aa6.26□□□□□ -1.41
USP48-207ENST00000471752 AK6Q9Y3D8 172 aaKnown RBP6.26□□□□□ -1.41
USP48-207ENST00000471752 HYDINQ4G0P3 5121 aa6.26□□□□□ -1.41
USP48-207ENST00000471752 A0A0B4J203 849 aa6.25□□□□□ -1.41
USP48-207ENST00000471752 IRGMA1A4Y4 181 aa6.25□□□□□ -1.41
USP48-207ENST00000471752 FAM90A10PA6NDY2 464 aa6.25□□□□□ -1.41
USP48-207ENST00000471752 FAM90A7PA6NKC0 464 aa6.25□□□□□ -1.41
USP48-207ENST00000471752 FAM90A23PA8MXZ1 464 aa6.25□□□□□ -1.41
USP48-207ENST00000471752 SEC14L6B5MCN3 397 aa6.25□□□□□ -1.41
USP48-207ENST00000471752 MYL12BO14950 172 aa6.25□□□□□ -1.41
USP48-207ENST00000471752 SLC22A1O15245 554 aa6.25□□□□□ -1.41
USP48-207ENST00000471752 YPEL1O60688 119 aa6.25□□□□□ -1.41
USP48-207ENST00000471752 IGHV3-11P01762 117 aa6.25□□□□□ -1.41
USP48-207ENST00000471752 ELANEP08246 267 aa6.25□□□□□ -1.41
USP48-207ENST00000471752 IL3RAP26951 378 aa6.25□□□□□ -1.41
USP48-207ENST00000471752 RAB9AP51151 201 aa6.25□□□□□ -1.41
USP48-207ENST00000471752 SLURP1P55000 103 aa6.25□□□□□ -1.41
USP48-207ENST00000471752 AQP4P55087 323 aa6.25□□□□□ -1.41
USP48-207ENST00000471752 CX3CL1P78423 397 aa6.25□□□□□ -1.41
USP48-207ENST00000471752 SSBP2P81877 361 aaPredicted RBP6.25□□□□□ -1.41
USP48-207ENST00000471752 HTD2P86397 168 aa6.25□□□□□ -1.41
USP48-207ENST00000471752 DEFA5Q01523 94 aa6.25□□□□□ -1.41
USP48-207ENST00000471752 PJVKQ0ZLH3 352 aa6.25□□□□□ -1.41
USP48-207ENST00000471752 GPR176Q14439 515 aa6.25□□□□□ -1.41
USP48-207ENST00000471752 PLAC9Q5JTB6 97 aa6.25□□□□□ -1.41
USP48-207ENST00000471752 RBM48Q5RL73 367 aaKnown RBP6.25□□□□□ -1.41
USP48-207ENST00000471752 CDH26Q8IXH8 852 aa6.25□□□□□ -1.41
USP48-207ENST00000471752 SVOPQ8N4V2 548 aa6.25□□□□□ -1.41
USP48-207ENST00000471752 SETD9Q8NE22 299 aa6.25□□□□□ -1.41
USP48-207ENST00000471752 NPBQ8NG41 125 aa6.25□□□□□ -1.41
USP48-207ENST00000471752 OR51D1Q8NGF3 324 aa6.25□□□□□ -1.41
USP48-207ENST00000471752 SETD6Q8TBK2 473 aa6.25□□□□□ -1.41
USP48-207ENST00000471752 DCUN1D4Q92564 292 aa6.25□□□□□ -1.41
USP48-207ENST00000471752 DLX4Q92988 240 aaPredicted RBP6.25□□□□□ -1.41
USP48-207ENST00000471752 MRPS24Q96EL2 167 aaKnown RBP6.25□□□□□ -1.41
USP48-207ENST00000471752 MS4A10Q96PG2 267 aa6.25□□□□□ -1.41
USP48-207ENST00000471752 YPEL2Q96QA6 119 aa6.25□□□□□ -1.41
USP48-207ENST00000471752 UQCC2Q9BRT2 126 aa6.25□□□□□ -1.41
USP48-207ENST00000471752 SPACA1Q9HBV2 294 aa6.25□□□□□ -1.41
USP48-207ENST00000471752 ELF5Q9UKW6 265 aaPredicted RBP6.25□□□□□ -1.41
USP48-207ENST00000471752 SORL1Q92673 2214 aa6.25□□□□□ -1.41
USP48-207ENST00000471752 IGHV4OR15-8A0A075B7B6 117 aa6.24□□□□□ -1.41
USP48-207ENST00000471752 A0A087WW49 117 aa6.24□□□□□ -1.41
USP48-207ENST00000471752 TRAV41A0A0B4J266 112 aa6.24□□□□□ -1.41
USP48-207ENST00000471752 H0YJW9 148 aa6.24□□□□□ -1.41
USP48-207ENST00000471752 ARPC1BO15143 372 aaKnown RBP6.24□□□□□ -1.41
USP48-207ENST00000471752 NBR2O15453 112 aa6.24□□□□□ -1.41
USP48-207ENST00000471752 RBMXL2O75526 392 aaKnown RBP6.24□□□□□ -1.41
USP48-207ENST00000471752 DUS4LO95620 317 aaKnown RBP6.24□□□□□ -1.41
USP48-207ENST00000471752 HLA-DRB1P01911 266 aa6.24□□□□□ -1.41
USP48-207ENST00000471752 IGKV1-16P04430 117 aa6.24□□□□□ -1.41
USP48-207ENST00000471752 GLAP06280 429 aa6.24□□□□□ -1.41
USP48-207ENST00000471752 UCHL1P09936 223 aa6.24□□□□□ -1.41
USP48-207ENST00000471752 VDAC1P21796 283 aa6.24□□□□□ -1.41
USP48-207ENST00000471752 CEACAM6P40199 344 aa6.24□□□□□ -1.41
USP48-207ENST00000471752 MED22Q15528 200 aa6.24□□□□□ -1.41
USP48-207ENST00000471752 ECSCRQ19T08 205 aa6.24□□□□□ -1.41
USP48-207ENST00000471752 MOGAT2Q3SYC2 334 aa6.24□□□□□ -1.41
USP48-207ENST00000471752 Q3ZCU0 254 aa6.24□□□□□ -1.41
USP48-207ENST00000471752 STEAP3Q658P3 488 aa6.24□□□□□ -1.41
USP48-207ENST00000471752 LIN54Q6MZP7 749 aa6.24□□□□□ -1.41
USP48-207ENST00000471752 OVCH2Q7RTZ1 564 aa6.24□□□□□ -1.41
USP48-207ENST00000471752 LINC00528Q8N1L1 170 aa6.24□□□□□ -1.41
USP48-207ENST00000471752 FAM89BQ8N5H3 189 aa6.24□□□□□ -1.41
USP48-207ENST00000471752 COMMD1Q8N668 190 aa6.24□□□□□ -1.41
USP48-207ENST00000471752 ZNF383Q8NA42 475 aa6.24□□□□□ -1.41
USP48-207ENST00000471752 OR8U1Q8NH10 309 aa6.24□□□□□ -1.41
USP48-207ENST00000471752 C4orf3Q8WVX3 66 aa6.24□□□□□ -1.41
USP48-207ENST00000471752 MAFIPQ8WZ33 124 aa6.24□□□□□ -1.41
USP48-207ENST00000471752 ARHGAP5-AS1Q96IT6 56 aa6.24□□□□□ -1.41
USP48-207ENST00000471752 NEDD4LQ96PU5 975 aa6.24□□□□□ -1.41
USP48-207ENST00000471752 TM2D1Q9BX74 207 aa6.24□□□□□ -1.41
USP48-207ENST00000471752 ZFAND3Q9H8U3 227 aa6.24□□□□□ -1.41
USP48-207ENST00000471752 KCNIP1Q9NZI2 227 aa6.24□□□□□ -1.41
USP48-207ENST00000471752 ADAM30Q9UKF2 790 aa6.24□□□□□ -1.41
USP48-207ENST00000471752 ERGIC3Q9Y282 383 aa6.24□□□□□ -1.41
USP48-207ENST00000471752 KCNK7Q9Y2U2 307 aa6.24□□□□□ -1.41
USP48-207ENST00000471752 NUBP2Q9Y5Y2 271 aa6.24□□□□□ -1.41
USP48-207ENST00000471752 IGKV1D-8A0A087WSZ0 117 aa6.23□□□□□ -1.41
USP48-207ENST00000471752 TRIM64CA6NLI5 447 aa6.23□□□□□ -1.41
USP48-207ENST00000471752 LDLRAD4O15165 306 aa6.23□□□□□ -1.41
USP48-207ENST00000471752 CA11O75493 328 aa6.23□□□□□ -1.41
USP48-207ENST00000471752 NDUFA3O95167 84 aa6.23□□□□□ -1.41
USP48-207ENST00000471752 HSMCR30P0CW71 290 aa6.23□□□□□ -1.41
USP48-207ENST00000471752 VEGFCP49767 419 aa6.23□□□□□ -1.41
USP48-207ENST00000471752 OR10A3P58181 314 aa6.23□□□□□ -1.41
USP48-207ENST00000471752 TAS2R43P59537 309 aa6.23□□□□□ -1.41
USP48-207ENST00000471752 FABP5Q01469 135 aa6.23□□□□□ -1.41
USP48-207ENST00000471752 PSG5Q15238 335 aa6.23□□□□□ -1.41
USP48-207ENST00000471752 SPHARQ15513 63 aa6.23□□□□□ -1.41
USP48-207ENST00000471752 MRGPRG-AS1Q2M3A8 158 aa6.23□□□□□ -1.41
USP48-207ENST00000471752 C2orf76Q3KRA6 126 aa6.23□□□□□ -1.41
USP48-207ENST00000471752 HSD17B12Q53GQ0 312 aa6.23□□□□□ -1.41
USP48-207ENST00000471752 IGSF11Q5DX21 431 aa6.23□□□□□ -1.41
USP48-207ENST00000471752 RNLSQ5VYX0 342 aa6.23□□□□□ -1.41
USP48-207ENST00000471752 NR2C2APQ86WQ0 139 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms