RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 TOX4O94842 621 aa7.98□□□□□ -1.13
SF3A1-207ENST00000471342 OR8U9P0C7N5 309 aa7.98□□□□□ -1.13
SF3A1-207ENST00000471342 CT45A6P0DMU7 189 aa7.98□□□□□ -1.13
SF3A1-207ENST00000471342 CT45A5P0DMU8 189 aa7.98□□□□□ -1.13
SF3A1-207ENST00000471342 CT45A7P0DMV0 189 aa7.98□□□□□ -1.13
SF3A1-207ENST00000471342 PI3P19957 117 aa7.98□□□□□ -1.13
SF3A1-207ENST00000471342 GATA3P23771 443 aa7.98□□□□□ -1.13
SF3A1-207ENST00000471342 UBE2E1P51965 193 aa7.98□□□□□ -1.13
SF3A1-207ENST00000471342 DCTN2Q13561 401 aaKnown RBP7.98□□□□□ -1.13
SF3A1-207ENST00000471342 CHRFAM7AQ494W8 412 aa7.98□□□□□ -1.13
SF3A1-207ENST00000471342 ACTBL2Q562R1 376 aa7.98□□□□□ -1.13
SF3A1-207ENST00000471342 RPL39P5Q59GN2 51 aa7.98□□□□□ -1.13
SF3A1-207ENST00000471342 RNASE10Q5GAN6 216 aaKnown RBP7.98□□□□□ -1.13
SF3A1-207ENST00000471342 DCAF12L2Q5VW00 463 aa7.98□□□□□ -1.13
SF3A1-207ENST00000471342 C9orf139Q6ZV77 190 aa7.98□□□□□ -1.13
SF3A1-207ENST00000471342 ZNF383Q8NA42 475 aa7.98□□□□□ -1.13
SF3A1-207ENST00000471342 BVESQ8NE79 360 aa7.98□□□□□ -1.13
SF3A1-207ENST00000471342 OR8U1Q8NH10 309 aa7.98□□□□□ -1.13
SF3A1-207ENST00000471342 OR9G1Q8NH87 305 aa7.98□□□□□ -1.13
SF3A1-207ENST00000471342 MARCH1Q8TCQ1 289 aa7.98□□□□□ -1.13
SF3A1-207ENST00000471342 RITA1Q96K30 269 aa7.98□□□□□ -1.13
SF3A1-207ENST00000471342 C7orf50Q9BRJ6 194 aaKnown RBP7.98□□□□□ -1.13
SF3A1-207ENST00000471342 C7orf69Q9H7B7 122 aa7.98□□□□□ -1.13
SF3A1-207ENST00000471342 KCNIP1Q9NZI2 227 aa7.98□□□□□ -1.13
SF3A1-207ENST00000471342 RNF150Q9ULK6 438 aa7.98□□□□□ -1.13
SF3A1-207ENST00000471342 AUP1Q9Y679 476 aa7.98□□□□□ -1.13
SF3A1-207ENST00000471342 SONP18583 2426 aaKnown RBP7.97□□□□□ -1.13
SF3A1-207ENST00000471342 IGHV3OR16-10A0A075B7F0 116 aa7.97□□□□□ -1.13
SF3A1-207ENST00000471342 SAA2-SAA4A0A096LPE2 208 aa7.97□□□□□ -1.13
SF3A1-207ENST00000471342 IGHV1-69DA0A0B4J2H0 117 aa7.97□□□□□ -1.13
SF3A1-207ENST00000471342 J3QLI3 93 aa7.97□□□□□ -1.13
SF3A1-207ENST00000471342 PGLYRP1O75594 196 aaPredicted RBP7.97□□□□□ -1.13
SF3A1-207ENST00000471342 IGKV1-39P01597 117 aa7.97□□□□□ -1.13
SF3A1-207ENST00000471342 IGHV1-69P01742 117 aa7.97□□□□□ -1.13
SF3A1-207ENST00000471342 IGKV1D-39P04432 117 aa7.97□□□□□ -1.13
SF3A1-207ENST00000471342 TCRBP04435 133 aa7.97□□□□□ -1.13
SF3A1-207ENST00000471342 AMY2AP04746 511 aa7.97□□□□□ -1.13
SF3A1-207ENST00000471342 SAA2P0DJI9 122 aaPredicted RBP7.97□□□□□ -1.13
SF3A1-207ENST00000471342 FOSL1P15407 271 aa7.97□□□□□ -1.13
SF3A1-207ENST00000471342 COX7A1P24310 79 aa7.97□□□□□ -1.13
SF3A1-207ENST00000471342 NFYBP25208 207 aa7.97□□□□□ -1.13
SF3A1-207ENST00000471342 GNG10P50151 68 aa7.97□□□□□ -1.13
SF3A1-207ENST00000471342 BAMBIQ13145 260 aa7.97□□□□□ -1.13
SF3A1-207ENST00000471342 MEF2DQ14814 521 aa7.97□□□□□ -1.13
SF3A1-207ENST00000471342 MSMO1Q15800 293 aa7.97□□□□□ -1.13
SF3A1-207ENST00000471342 ZNF585BQ52M93 769 aa7.97□□□□□ -1.13
SF3A1-207ENST00000471342 NCR3LG1Q68D85 454 aa7.97□□□□□ -1.13
SF3A1-207ENST00000471342 IDO2Q6ZQW0 420 aa7.97□□□□□ -1.13
SF3A1-207ENST00000471342 OR6F1Q8NGZ6 308 aa7.97□□□□□ -1.13
SF3A1-207ENST00000471342 OR10J5Q8NHC4 309 aa7.97□□□□□ -1.13
SF3A1-207ENST00000471342 LHX4Q969G2 390 aa7.97□□□□□ -1.13
SF3A1-207ENST00000471342 NABP2Q9BQ15 211 aa7.97□□□□□ -1.13
SF3A1-207ENST00000471342 MARVELD1Q9BSK0 173 aa7.97□□□□□ -1.13
SF3A1-207ENST00000471342 PCGF1Q9BSM1 259 aa7.97□□□□□ -1.13
SF3A1-207ENST00000471342 ABHD14AQ9BUJ0 271 aa7.97□□□□□ -1.13
SF3A1-207ENST00000471342 MMP28Q9H239 520 aa7.97□□□□□ -1.13
SF3A1-207ENST00000471342 ZNF69Q9UC07 566 aa7.97□□□□□ -1.13
SF3A1-207ENST00000471342 F8P00451 2351 aa7.97□□□□□ -1.13
SF3A1-207ENST00000471342 WNK2Q9Y3S1 2297 aa7.96□□□□□ -1.13
SF3A1-207ENST00000471342 A0A1W2PRD5 423 aa7.96□□□□□ -1.14
SF3A1-207ENST00000471342 A0A1W2PRF3 423 aa7.96□□□□□ -1.14
SF3A1-207ENST00000471342 A0A1W2PRM7 423 aa7.96□□□□□ -1.14
SF3A1-207ENST00000471342 NAP1L6A6NFF2 107 aa7.96□□□□□ -1.14
SF3A1-207ENST00000471342 IL6RP08887 468 aaPredicted RBP7.96□□□□□ -1.14
SF3A1-207ENST00000471342 DUTP33316 252 aaKnown RBP7.96□□□□□ -1.14
SF3A1-207ENST00000471342 RND3P61587 244 aa7.96□□□□□ -1.14
SF3A1-207ENST00000471342 TPTE2P1Q5T6R2 138 aa7.96□□□□□ -1.14
SF3A1-207ENST00000471342 TRIQKQ629K1 86 aa7.96□□□□□ -1.14
SF3A1-207ENST00000471342 ZNF57Q68EA5 555 aaPredicted RBP7.96□□□□□ -1.14
SF3A1-207ENST00000471342 FAHD2BQ6P2I3 314 aaPredicted RBP7.96□□□□□ -1.14
SF3A1-207ENST00000471342 BRD3OSQ6XYD6 125 aa7.96□□□□□ -1.14
SF3A1-207ENST00000471342 PDZD9Q8IXQ8 264 aa7.96□□□□□ -1.14
SF3A1-207ENST00000471342 Q8N6K4 173 aa7.96□□□□□ -1.14
SF3A1-207ENST00000471342 OR5AN1Q8NGI8 311 aa7.96□□□□□ -1.14
SF3A1-207ENST00000471342 FAM216AQ8WUB2 273 aa7.96□□□□□ -1.14
SF3A1-207ENST00000471342 CHPT1Q8WUD6 406 aa7.96□□□□□ -1.14
SF3A1-207ENST00000471342 FAHD2AQ96GK7 314 aa7.96□□□□□ -1.14
SF3A1-207ENST00000471342 CLEC7AQ9BXN2 247 aa7.96□□□□□ -1.14
SF3A1-207ENST00000471342 MEGF9Q9H1U4 602 aa7.96□□□□□ -1.14
SF3A1-207ENST00000471342 TMEM160Q9NX00 188 aa7.96□□□□□ -1.14
SF3A1-207ENST00000471342 GNG12Q9UBI6 72 aa7.96□□□□□ -1.14
SF3A1-207ENST00000471342 TRAV40A0A0B4J280 105 aa7.95□□□□□ -1.14
SF3A1-207ENST00000471342 A0A0U1RQK1 487 aa7.95□□□□□ -1.14
SF3A1-207ENST00000471342 MDFIC2A0A1B0GVS7 189 aa7.95□□□□□ -1.14
SF3A1-207ENST00000471342 SRRM4A7MD48 611 aaKnown RBP7.95□□□□□ -1.14
SF3A1-207ENST00000471342 NPFFO15130 113 aa7.95□□□□□ -1.14
SF3A1-207ENST00000471342 CTSDP07339 412 aaPredicted RBP7.95□□□□□ -1.14
SF3A1-207ENST00000471342 P0C879 139 aa7.95□□□□□ -1.14
SF3A1-207ENST00000471342 CD99P14209 185 aa7.95□□□□□ -1.14
SF3A1-207ENST00000471342 SAA4P35542 130 aa7.95□□□□□ -1.14
SF3A1-207ENST00000471342 ARPC4P59998 168 aa7.95□□□□□ -1.14
SF3A1-207ENST00000471342 MRPS15P82914 257 aaKnown RBP7.95□□□□□ -1.14
SF3A1-207ENST00000471342 ZNF816Q0VGE8 651 aaPredicted RBP7.95□□□□□ -1.14
SF3A1-207ENST00000471342 EBI3Q14213 229 aa7.95□□□□□ -1.14
SF3A1-207ENST00000471342 SURF2Q15527 256 aaPredicted RBP7.95□□□□□ -1.14
SF3A1-207ENST00000471342 FAM120AOSQ5T036 256 aa7.95□□□□□ -1.14
SF3A1-207ENST00000471342 BTNL3Q6UXE8 466 aa7.95□□□□□ -1.14
SF3A1-207ENST00000471342 CCBE1Q6UXH8 406 aaPredicted RBP7.95□□□□□ -1.14
SF3A1-207ENST00000471342 IL17RELQ6ZVW7 336 aa7.95□□□□□ -1.14
SF3A1-207ENST00000471342 SLC25A42Q86VD7 318 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms