RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 TRAV40A0A0B4J280 105 aa3.87□□□□□ -1.79
CKS1B-204ENST00000471245 ISPDA4D126 451 aa3.87□□□□□ -1.79
CKS1B-204ENST00000471245 SMIM23A6NLE4 172 aa3.87□□□□□ -1.79
CKS1B-204ENST00000471245 SPAG7O75391 227 aa3.87□□□□□ -1.79
CKS1B-204ENST00000471245 IGHMP01871 453 aa3.87□□□□□ -1.79
CKS1B-204ENST00000471245 TFPTP0C1Z6 253 aa3.87□□□□□ -1.79
CKS1B-204ENST00000471245 CXCR1P25024 350 aa3.87□□□□□ -1.79
CKS1B-204ENST00000471245 CFHR2P36980 270 aa3.87□□□□□ -1.79
CKS1B-204ENST00000471245 SUB1P53999 127 aaKnown RBP eCLIP3.87□□□□□ -1.79
CKS1B-204ENST00000471245 EMX2Q04743 252 aa3.87□□□□□ -1.79
CKS1B-204ENST00000471245 HERPUD1Q15011 391 aa3.87□□□□□ -1.79
CKS1B-204ENST00000471245 CEACAM16Q2WEN9 425 aa3.87□□□□□ -1.79
CKS1B-204ENST00000471245 DEFB112Q30KQ8 113 aa3.87□□□□□ -1.79
CKS1B-204ENST00000471245 TRMT5Q32P41 509 aaKnown RBP3.87□□□□□ -1.79
CKS1B-204ENST00000471245 C1orf140Q5VVS0 124 aa3.87□□□□□ -1.79
CKS1B-204ENST00000471245 ULK3Q6PHR2 472 aa3.87□□□□□ -1.79
CKS1B-204ENST00000471245 SPATA24Q86W54 205 aa3.87□□□□□ -1.79
CKS1B-204ENST00000471245 NATD1Q8N6N6 113 aa3.87□□□□□ -1.79
CKS1B-204ENST00000471245 OR51L1Q8NGJ5 315 aa3.87□□□□□ -1.79
CKS1B-204ENST00000471245 ZNF596Q8TC21 504 aa3.87□□□□□ -1.79
CKS1B-204ENST00000471245 MYDGFQ969H8 173 aa3.87□□□□□ -1.79
CKS1B-204ENST00000471245 RPUSD4Q96CM3 377 aaKnown RBP3.87□□□□□ -1.79
CKS1B-204ENST00000471245 SLC35E1Q96K37 410 aa3.87□□□□□ -1.79
CKS1B-204ENST00000471245 CCDC115Q96NT0 180 aa3.87□□□□□ -1.79
CKS1B-204ENST00000471245 TRNT1Q96Q11 434 aaKnown RBP3.87□□□□□ -1.79
CKS1B-204ENST00000471245 OR2M2Q96R28 347 aa3.87□□□□□ -1.79
CKS1B-204ENST00000471245 WFDC6Q9BQY6 131 aa3.87□□□□□ -1.79
CKS1B-204ENST00000471245 TAAR3PQ9P1P4 343 aa3.87□□□□□ -1.79
CKS1B-204ENST00000471245 MARCOQ9UEW3 520 aaPredicted RBP3.87□□□□□ -1.79
CKS1B-204ENST00000471245 IGLV3-9A0A075B6K5 115 aa3.86□□□□□ -1.79
CKS1B-204ENST00000471245 TRAV6A0A075B6T7 132 aa3.86□□□□□ -1.79
CKS1B-204ENST00000471245 TMEM120BA0PK00 339 aa3.86□□□□□ -1.79
CKS1B-204ENST00000471245 LRRN3E7EW58 273 aa3.86□□□□□ -1.79
CKS1B-204ENST00000471245 CCNB2O95067 398 aa3.86□□□□□ -1.79
CKS1B-204ENST00000471245 VAMP5O95183 116 aa3.86□□□□□ -1.79
CKS1B-204ENST00000471245 DBIP07108 87 aaKnown RBP3.86□□□□□ -1.79
CKS1B-204ENST00000471245 CCL2P13500 99 aa3.86□□□□□ -1.79
CKS1B-204ENST00000471245 CTRB1P17538 263 aa3.86□□□□□ -1.79
CKS1B-204ENST00000471245 GRPRP30550 384 aa3.86□□□□□ -1.79
CKS1B-204ENST00000471245 CAV2P51636 162 aa3.86□□□□□ -1.79
CKS1B-204ENST00000471245 ERVS71-1P61550 626 aa3.86□□□□□ -1.79
CKS1B-204ENST00000471245 LYZP61626 148 aa3.86□□□□□ -1.79
CKS1B-204ENST00000471245 RPS23P62266 143 aaKnown RBP3.86□□□□□ -1.79
CKS1B-204ENST00000471245 KIAA0087Q14695 138 aa3.86□□□□□ -1.79
CKS1B-204ENST00000471245 SOHLH1Q5JUK2 328 aa3.86□□□□□ -1.79
CKS1B-204ENST00000471245 BRD3OSQ6XYD6 125 aa3.86□□□□□ -1.79
CKS1B-204ENST00000471245 C20orf196Q8IYI0 205 aa3.86□□□□□ -1.79
CKS1B-204ENST00000471245 PUSL1Q8N0Z8 303 aaKnown RBP3.86□□□□□ -1.79
CKS1B-204ENST00000471245 C10orf111Q8N326 155 aa3.86□□□□□ -1.79
CKS1B-204ENST00000471245 FAM86B1Q8N7N1 296 aa3.86□□□□□ -1.79
CKS1B-204ENST00000471245 C20orf203Q8NBC4 194 aa3.86□□□□□ -1.79
CKS1B-204ENST00000471245 OR1N2Q8NGR9 330 aa3.86□□□□□ -1.79
CKS1B-204ENST00000471245 MFSD8Q8NHS3 518 aa3.86□□□□□ -1.79
CKS1B-204ENST00000471245 FANK1Q8TC84 345 aa3.86□□□□□ -1.79
CKS1B-204ENST00000471245 TCP10LQ8TDR4 215 aa3.86□□□□□ -1.79
CKS1B-204ENST00000471245 CAPSLQ8WWF8 208 aa3.86□□□□□ -1.79
CKS1B-204ENST00000471245 CCL17Q92583 94 aa3.86□□□□□ -1.79
CKS1B-204ENST00000471245 TESCQ96BS2 214 aa3.86□□□□□ -1.79
CKS1B-204ENST00000471245 NRBF2Q96F24 287 aa3.86□□□□□ -1.79
CKS1B-204ENST00000471245 DUS3LQ96G46 650 aaKnown RBP3.86□□□□□ -1.79
CKS1B-204ENST00000471245 EMC6Q9BV81 110 aa3.86□□□□□ -1.79
CKS1B-204ENST00000471245 DPY30Q9C005 99 aa3.86□□□□□ -1.79
CKS1B-204ENST00000471245 CCL28Q9NRJ3 127 aa3.86□□□□□ -1.79
CKS1B-204ENST00000471245 NECAP2Q9NVZ3 263 aa3.86□□□□□ -1.79
CKS1B-204ENST00000471245 ZNF443Q9Y2A4 671 aaPredicted RBP3.86□□□□□ -1.79
CKS1B-204ENST00000471245 DNAH1Q9P2D7 4330 aa3.86□□□□□ -1.79
CKS1B-204ENST00000471245 TENM2Q9NT68 2774 aa3.85□□□□□ -1.79
CKS1B-204ENST00000471245 A0A0G2JLM5 398 aa3.85□□□□□ -1.79
CKS1B-204ENST00000471245 KIR2DL5BA0A0G2JN68 375 aa3.85□□□□□ -1.79
CKS1B-204ENST00000471245 KIR2DL5BA0A0G2JPC4 375 aa3.85□□□□□ -1.79
CKS1B-204ENST00000471245 LOC102725191A0A1B0GVB3 256 aa3.85□□□□□ -1.79
CKS1B-204ENST00000471245 SLC31A2O15432 143 aa3.85□□□□□ -1.79
CKS1B-204ENST00000471245 IGLV1-47P01700 117 aa3.85□□□□□ -1.79
CKS1B-204ENST00000471245 BGLAPP02818 100 aa3.85□□□□□ -1.79
CKS1B-204ENST00000471245 BPGMP07738 259 aa3.85□□□□□ -1.79
CKS1B-204ENST00000471245 CD79AP11912 226 aa3.85□□□□□ -1.79
CKS1B-204ENST00000471245 ZNF250P15622 560 aa3.85□□□□□ -1.79
CKS1B-204ENST00000471245 FUT3P21217 361 aa3.85□□□□□ -1.79
CKS1B-204ENST00000471245 CRISP1P54107 249 aa3.85□□□□□ -1.79
CKS1B-204ENST00000471245 KLF3P57682 345 aaPredicted RBP3.85□□□□□ -1.79
CKS1B-204ENST00000471245 ZNF79Q15937 498 aa3.85□□□□□ -1.79
CKS1B-204ENST00000471245 C6orf89Q6UWU4 347 aa3.85□□□□□ -1.79
CKS1B-204ENST00000471245 SPAG16Q8N0X2 631 aa3.85□□□□□ -1.79
CKS1B-204ENST00000471245 KIR2DL5AQ8N109 375 aa3.85□□□□□ -1.79
CKS1B-204ENST00000471245 TMEM86BQ8N661 226 aa3.85□□□□□ -1.79
CKS1B-204ENST00000471245 INO80EQ8NBZ0 244 aaPredicted RBP3.85□□□□□ -1.79
CKS1B-204ENST00000471245 TMEM104Q8NE00 496 aa3.85□□□□□ -1.79
CKS1B-204ENST00000471245 OR10G9Q8NGN4 311 aa3.85□□□□□ -1.79
CKS1B-204ENST00000471245 OR52P1PQ8NH57 321 aa3.85□□□□□ -1.79
CKS1B-204ENST00000471245 KIR2DL5BQ8NHK3 375 aa3.85□□□□□ -1.79
CKS1B-204ENST00000471245 LYPD6BQ8NI32 183 aa3.85□□□□□ -1.79
CKS1B-204ENST00000471245 SYNPRQ8TBG9 265 aa3.85□□□□□ -1.79
CKS1B-204ENST00000471245 PHYHIPLQ96FC7 376 aa3.85□□□□□ -1.79
CKS1B-204ENST00000471245 TAPBPLQ9BX59 468 aa3.85□□□□□ -1.79
CKS1B-204ENST00000471245 ACTR3CQ9C0K3 210 aaPredicted RBP3.85□□□□□ -1.79
CKS1B-204ENST00000471245 OR51B6Q9H340 312 aa3.85□□□□□ -1.79
CKS1B-204ENST00000471245 PATZ1Q9HBE1 687 aaKnown RBP3.85□□□□□ -1.79
CKS1B-204ENST00000471245 LYSTQ99698 3801 aa3.85□□□□□ -1.79
CKS1B-204ENST00000471245 A0A087WUJ7 227 aa3.84□□□□□ -1.79
CKS1B-204ENST00000471245 A0A1B0GWA3 101 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms