RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 DEFB127Q9H1M4 99 aa3.3□□□□□ -1.88
PRPF40A-206ENST00000471167 HSPB8Q9UJY1 196 aa3.3□□□□□ -1.88
PRPF40A-206ENST00000471167 WASHC3Q9Y3C0 194 aa3.3□□□□□ -1.88
PRPF40A-206ENST00000471167 SMG6Q86US8 1419 aaKnown RBP3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 VIRMAQ69YN4 1812 aaKnown RBP3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 SPEF2Q9C093 1822 aa3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 TRAV8-3A0A0A6YYJ7 113 aa3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 IGHV1-69DA0A0B4J2H0 117 aa3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 WI2-2373I1.2A0A1W2PRP0 233 aa3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 OR5H14A6NHG9 310 aa3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 INMT-MINDY4F8WBC2 141 aa3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 K7EPK0 472 aa3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 FFAR1O14842 300 aa3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 IGHMP01871 453 aa3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 SERPINE1P05121 402 aa3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 CRYBA1P05813 215 aa3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 CPMP14384 443 aa3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 IL2RGP31785 369 aa3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 APLNRP35414 380 aa3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 TALDO1P37837 337 aa3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 GFERP55789 205 aa3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 CTBP2P56545 445 aa3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 DEFA1P59665 94 aa3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 GNG2P59768 71 aa3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 RRAS2P62070 204 aaPredicted RBP3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 BAMBIQ13145 260 aa3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 OR8B8Q15620 311 aa3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 GRK1Q15835 563 aa3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 ATP6AP1LQ52LC2 224 aa3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 LCE1CQ5T751 118 aa3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 LCE1BQ5T7P3 118 aa3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 FAM222AQ5U5X8 452 aa3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 LCN8Q6JVE9 175 aa3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 AGTRAPQ6RW13 159 aa3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 STRADAQ7RTN6 431 aa3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 CEND1Q8N111 149 aa3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 OR8B12Q8NGG6 310 aa3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 OR8S1Q8NH09 359 aa3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 RXFP4Q8TDU9 374 aa3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 CT55Q8WUE5 264 aa3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 CANT1Q8WVQ1 401 aa3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 FAM151AQ8WW52 585 aa3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 FXYD5Q96DB9 178 aa3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 PDXPQ96GD0 296 aa3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 SLC25A44Q96H78 314 aaPredicted RBP3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 SLC35E1Q96K37 410 aa3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 FCRL1Q96LA6 429 aa3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 LINC01587Q99440 93 aa3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 TMEM70Q9BUB7 260 aa3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 C19orf24Q9BVV8 132 aa3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 SFXN3Q9BWM7 321 aa3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 NOX3Q9HBY0 568 aa3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 MMP26Q9NRE1 261 aa3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 PRTFDC1Q9NRG1 225 aa3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 RBM12B-AS1Q9P1G2 102 aa3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 HEBP2Q9Y5Z4 205 aa3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 RFNGQ9Y644 331 aa3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 ENPP4Q9Y6X5 453 aa3.29□□□□□ -1.88
PRPF40A-206ENST00000471167 BORCS7-ASMTA0A0B4J1R7 106 aa3.28□□□□□ -1.88
PRPF40A-206ENST00000471167 TRAV26-2A0A0B4J265 109 aa3.28□□□□□ -1.88
PRPF40A-206ENST00000471167 LOC389332A0A1B0GUA5 103 aa3.28□□□□□ -1.88
PRPF40A-206ENST00000471167 TMEM189A5PLL7 270 aa3.28□□□□□ -1.88
PRPF40A-206ENST00000471167 J3KT08 172 aa3.28□□□□□ -1.88
PRPF40A-206ENST00000471167 ZNF780AO75290 641 aaPredicted RBP3.28□□□□□ -1.88
PRPF40A-206ENST00000471167 NDUFC2O95298 119 aa3.28□□□□□ -1.88
PRPF40A-206ENST00000471167 UBBP0CG47 229 aa3.28□□□□□ -1.88
PRPF40A-206ENST00000471167 MPC1LP0DKB6 136 aa3.28□□□□□ -1.88
PRPF40A-206ENST00000471167 GADD45AP24522 165 aa3.28□□□□□ -1.88
PRPF40A-206ENST00000471167 ZNF138P52744 262 aa3.28□□□□□ -1.88
PRPF40A-206ENST00000471167 KLF3P57682 345 aaPredicted RBP3.28□□□□□ -1.88
PRPF40A-206ENST00000471167 TAS2R19P59542 299 aa3.28□□□□□ -1.88
PRPF40A-206ENST00000471167 SNRPD2P62316 118 aaKnown RBP3.28□□□□□ -1.88
PRPF40A-206ENST00000471167 FABP5Q01469 135 aa3.28□□□□□ -1.88
PRPF40A-206ENST00000471167 EMX2Q04743 252 aa3.28□□□□□ -1.88
PRPF40A-206ENST00000471167 REG3AQ06141 175 aa3.28□□□□□ -1.88
PRPF40A-206ENST00000471167 KCNJ8Q15842 424 aa3.28□□□□□ -1.88
PRPF40A-206ENST00000471167 VN1R4Q7Z5H5 301 aa3.28□□□□□ -1.88
PRPF40A-206ENST00000471167 ANKRD29Q8N6D5 301 aa3.28□□□□□ -1.88
PRPF40A-206ENST00000471167 GDPD1Q8N9F7 314 aa3.28□□□□□ -1.88
PRPF40A-206ENST00000471167 NKAPP1Q8N9T2 125 aa3.28□□□□□ -1.88
PRPF40A-206ENST00000471167 OR13C4Q8NGS5 318 aa3.28□□□□□ -1.88
PRPF40A-206ENST00000471167 OR2G3Q8NGZ4 309 aa3.28□□□□□ -1.88
PRPF40A-206ENST00000471167 OR5K1Q8NHB7 308 aa3.28□□□□□ -1.88
PRPF40A-206ENST00000471167 NEURL3Q96EH8 262 aa3.28□□□□□ -1.88
PRPF40A-206ENST00000471167 SERPINI1Q99574 410 aa3.28□□□□□ -1.88
PRPF40A-206ENST00000471167 TMEM147Q9BVK8 224 aa3.28□□□□□ -1.88
PRPF40A-206ENST00000471167 MRPL20Q9BYC9 149 aaKnown RBP3.28□□□□□ -1.88
PRPF40A-206ENST00000471167 TBL1XR1Q9BZK7 514 aa3.28□□□□□ -1.88
PRPF40A-206ENST00000471167 TMEM222Q9H0R3 208 aa3.28□□□□□ -1.88
PRPF40A-206ENST00000471167 ZNF331Q9NQX6 463 aaPredicted RBP3.28□□□□□ -1.88
PRPF40A-206ENST00000471167 AIG1Q9NVV5 245 aa3.28□□□□□ -1.88
PRPF40A-206ENST00000471167 CALML5Q9NZT1 146 aa3.28□□□□□ -1.88
PRPF40A-206ENST00000471167 GNG8Q9UK08 70 aa3.28□□□□□ -1.88
PRPF40A-206ENST00000471167 INSIG2Q9Y5U4 225 aa3.28□□□□□ -1.88
PRPF40A-206ENST00000471167 MEGF6O75095 1541 aa3.28□□□□□ -1.88
PRPF40A-206ENST00000471167 NPHP4O75161 1426 aaPredicted RBP3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 CHD5Q8TDI0 1954 aa3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 IGHV7-81A0A0B4J1V7 117 aa3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 KNCNA6PVL3 124 aa3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms