RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 PUS1Q9Y606 427 aaKnown RBP eCLIP1.36□□□□□ -2.19
SSB-209ENST00000470621 GOLGA8IPA6NC78 632 aa1.35□□□□□ -2.19
SSB-209ENST00000470621 FABP12A6NFH5 140 aa1.35□□□□□ -2.19
SSB-209ENST00000470621 ITGB1BP1O14713 200 aa1.35□□□□□ -2.19
SSB-209ENST00000470621 COCHO43405 550 aa1.35□□□□□ -2.19
SSB-209ENST00000470621 UGT2B10P36537 528 aa1.35□□□□□ -2.19
SSB-209ENST00000470621 ANP32AP39687 249 aaKnown RBP1.35□□□□□ -2.19
SSB-209ENST00000470621 SULT1A2P50226 295 aa1.35□□□□□ -2.19
SSB-209ENST00000470621 EMP2P54851 167 aa1.35□□□□□ -2.19
SSB-209ENST00000470621 TPM4P67936 248 aa1.35□□□□□ -2.19
SSB-209ENST00000470621 PDK2Q15119 407 aa1.35□□□□□ -2.19
SSB-209ENST00000470621 CDKL4Q5MAI5 379 aa1.35□□□□□ -2.19
SSB-209ENST00000470621 ZNF565Q8N9K5 539 aa1.35□□□□□ -2.19
SSB-209ENST00000470621 SPACA4Q8TDM5 124 aa1.35□□□□□ -2.19
SSB-209ENST00000470621 TMEM239Q8WW34 195 aa1.35□□□□□ -2.19
SSB-209ENST00000470621 IFT81Q8WYA0 676 aa1.35□□□□□ -2.19
SSB-209ENST00000470621 CCDC124Q96CT7 223 aaKnown RBP1.35□□□□□ -2.19
SSB-209ENST00000470621 CDCA4Q9BXL8 241 aa1.35□□□□□ -2.19
SSB-209ENST00000470621 MRPL32Q9BYC8 188 aaKnown RBP1.35□□□□□ -2.19
SSB-209ENST00000470621 PRO2289Q9P1D8 64 aa1.35□□□□□ -2.19
SSB-209ENST00000470621 SCN9AQ15858 1988 aa1.35□□□□□ -2.19
SSB-209ENST00000470621 ARRDC5A6NEK1 342 aa1.34□□□□□ -2.19
SSB-209ENST00000470621 H3BSA7 217 aa1.34□□□□□ -2.19
SSB-209ENST00000470621 FADS2O95864 444 aaKnown RBP1.34□□□□□ -2.19
SSB-209ENST00000470621 TPM3P06753 285 aa1.34□□□□□ -2.19
SSB-209ENST00000470621 ESDP10768 282 aa1.34□□□□□ -2.19
SSB-209ENST00000470621 SLC25A16P16260 332 aa1.34□□□□□ -2.19
SSB-209ENST00000470621 CD40LGP29965 261 aa1.34□□□□□ -2.19
SSB-209ENST00000470621 ACTR1BP42025 376 aa1.34□□□□□ -2.19
SSB-209ENST00000470621 TSPEAR-AS2P59090 65 aa1.34□□□□□ -2.19
SSB-209ENST00000470621 UBE2IP63279 158 aaKnown RBP1.34□□□□□ -2.19
SSB-209ENST00000470621 EXOC3L4Q17RC7 722 aa1.34□□□□□ -2.19
SSB-209ENST00000470621 CENPWQ5EE01 88 aa1.34□□□□□ -2.19
SSB-209ENST00000470621 TIMM23BQ5SRD1 257 aa1.34□□□□□ -2.19
SSB-209ENST00000470621 MGLLQ99685 303 aa1.34□□□□□ -2.19
SSB-209ENST00000470621 TIMM21Q9BVV7 248 aa1.34□□□□□ -2.19
SSB-209ENST00000470621 ZNF471Q9BX82 626 aaPredicted RBP1.34□□□□□ -2.19
SSB-209ENST00000470621 NDEL1Q9GZM8 345 aa1.34□□□□□ -2.19
SSB-209ENST00000470621 GTSF1LQ9H1H1 148 aa1.34□□□□□ -2.19
SSB-209ENST00000470621 C11orf1Q9H5F2 150 aa1.34□□□□□ -2.19
SSB-209ENST00000470621 WDR54Q9H977 334 aa1.34□□□□□ -2.19
SSB-209ENST00000470621 NDUFB11Q9NX14 153 aa1.34□□□□□ -2.19
SSB-209ENST00000470621 MRPS16Q9Y3D3 137 aaKnown RBP1.34□□□□□ -2.19
SSB-209ENST00000470621 RAD50Q92878 1312 aa1.34□□□□□ -2.2
SSB-209ENST00000470621 ADCY9O60503 1353 aa1.34□□□□□ -2.2
SSB-209ENST00000470621 C1orf232A0A0U1RR37 186 aa1.33□□□□□ -2.2
SSB-209ENST00000470621 A0A1B0GX12 115 aa1.33□□□□□ -2.2
SSB-209ENST00000470621 C11orf86A6NJI1 115 aa1.33□□□□□ -2.2
SSB-209ENST00000470621 GPR171O14626 319 aa1.33□□□□□ -2.2
SSB-209ENST00000470621 TOX3O15405 576 aaPredicted RBP1.33□□□□□ -2.2
SSB-209ENST00000470621 LDOC1O95751 146 aaPredicted RBP1.33□□□□□ -2.2
SSB-209ENST00000470621 S100A6P06703 90 aa1.33□□□□□ -2.2
SSB-209ENST00000470621 LYNX1P0DP58 116 aa1.33□□□□□ -2.2
SSB-209ENST00000470621 KDELR2P33947 212 aa1.33□□□□□ -2.2
SSB-209ENST00000470621 RPL14P50914 215 aaKnown RBP1.33□□□□□ -2.2
SSB-209ENST00000470621 SLC35A2P78381 396 aa1.33□□□□□ -2.2
SSB-209ENST00000470621 AGTRAPQ6RW13 159 aa1.33□□□□□ -2.2
SSB-209ENST00000470621 TMEM156Q8N614 296 aa1.33□□□□□ -2.2
SSB-209ENST00000470621 RNASEH2CQ8TDP1 164 aaKnown RBP1.33□□□□□ -2.2
SSB-209ENST00000470621 DNAJB3Q8WWF6 145 aa1.33□□□□□ -2.2
SSB-209ENST00000470621 MED10Q9BTT4 135 aa1.33□□□□□ -2.2
SSB-209ENST00000470621 CCDC88CQ9P219 2028 aa1.33□□□□□ -2.2
SSB-209ENST00000470621 LRPPRCP42704 1394 aaKnown RBP1.33□□□□□ -2.2
SSB-209ENST00000470621 A0A1B0GVG6 124 aa1.32□□□□□ -2.2
SSB-209ENST00000470621 TMEM213A2RRL7 107 aa1.32□□□□□ -2.2
SSB-209ENST00000470621 H3BPC8 53 aa1.32□□□□□ -2.2
SSB-209ENST00000470621 TNFAIP8O95379 198 aa1.32□□□□□ -2.2
SSB-209ENST00000470621 ANGP03950 147 aaKnown RBP1.32□□□□□ -2.2
SSB-209ENST00000470621 ATF1P18846 271 aa1.32□□□□□ -2.2
SSB-209ENST00000470621 ORM2P19652 201 aa1.32□□□□□ -2.2
SSB-209ENST00000470621 CDC34P49427 236 aaPredicted RBP1.32□□□□□ -2.2
SSB-209ENST00000470621 TRMT12Q53H54 448 aaKnown RBP1.32□□□□□ -2.2
SSB-209ENST00000470621 C2orf91Q6ZV80 131 aa1.32□□□□□ -2.2
SSB-209ENST00000470621 FUNDC1Q8IVP5 155 aa1.32□□□□□ -2.2
SSB-209ENST00000470621 TMEM75Q8N9X5 138 aa1.32□□□□□ -2.2
SSB-209ENST00000470621 OR8J2Q8NGG1 315 aa1.32□□□□□ -2.2
SSB-209ENST00000470621 RORBQ92753 470 aa1.32□□□□□ -2.2
SSB-209ENST00000470621 CCDC127Q96BQ5 260 aa1.32□□□□□ -2.2
SSB-209ENST00000470621 C7orf50Q9BRJ6 194 aaKnown RBP1.32□□□□□ -2.2
SSB-209ENST00000470621 HDHD2Q9H0R4 259 aa1.32□□□□□ -2.2
SSB-209ENST00000470621 UCK1Q9HA47 277 aa1.32□□□□□ -2.2
SSB-209ENST00000470621 FIS1Q9Y3D6 152 aa1.32□□□□□ -2.2
SSB-209ENST00000470621 COL6A6A6NMZ7 2263 aa1.32□□□□□ -2.2
SSB-209ENST00000470621 DSCAMO60469 2012 aa1.32□□□□□ -2.2
SSB-209ENST00000470621 DENND4BO75064 1496 aaPredicted RBP1.31□□□□□ -2.2
SSB-209ENST00000470621 CHD2O14647 1828 aaKnown RBP1.31□□□□□ -2.2
SSB-209ENST00000470621 DHRS12A0PJE2 317 aa1.31□□□□□ -2.2
SSB-209ENST00000470621 EFCAB9A8MZ26 197 aa1.31□□□□□ -2.2
SSB-209ENST00000470621 J3QQQ9 107 aa1.31□□□□□ -2.2
SSB-209ENST00000470621 MPZL2O60487 215 aa1.31□□□□□ -2.2
SSB-209ENST00000470621 HOXA6P31267 233 aa1.31□□□□□ -2.2
SSB-209ENST00000470621 HAAOP46952 286 aa1.31□□□□□ -2.2
SSB-209ENST00000470621 PSMB3P49720 205 aa1.31□□□□□ -2.2
SSB-209ENST00000470621 HINT1P49773 126 aaPredicted RBP1.31□□□□□ -2.2
SSB-209ENST00000470621 CLDN12P56749 244 aa1.31□□□□□ -2.2
SSB-209ENST00000470621 ACTBP60709 375 aa1.31□□□□□ -2.2
SSB-209ENST00000470621 RPL26P61254 145 aaKnown RBP1.31□□□□□ -2.2
SSB-209ENST00000470621 ACTG1P63261 375 aa1.31□□□□□ -2.2
SSB-209ENST00000470621 OR4D1Q15615 310 aa1.31□□□□□ -2.2
SSB-209ENST00000470621 ZNHIT3Q15649 155 aaPredicted RBP1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 201.1 ms