RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 CLDN34H7C241 214 aa11.48□□□□□ -0.57
BRCA1-209ENST00000470026 PSPNO60542 156 aa11.48□□□□□ -0.57
BRCA1-209ENST00000470026 HAND1O96004 215 aa11.48□□□□□ -0.57
BRCA1-209ENST00000470026 CD59P13987 128 aa11.48□□□□□ -0.57
BRCA1-209ENST00000470026 NDUFA6P56556 154 aa11.48□□□□□ -0.57
BRCA1-209ENST00000470026 SLC38A11Q08AI6 406 aa11.48□□□□□ -0.57
BRCA1-209ENST00000470026 ALKBH6Q3KRA9 238 aa11.48□□□□□ -0.57
BRCA1-209ENST00000470026 RNFT1Q5M7Z0 435 aa11.48□□□□□ -0.57
BRCA1-209ENST00000470026 WDR25Q64LD2 544 aaPredicted RBP11.48□□□□□ -0.57
BRCA1-209ENST00000470026 SLC35E4Q6ICL7 350 aa11.48□□□□□ -0.57
BRCA1-209ENST00000470026 LURAP1LQ8IV03 231 aa11.48□□□□□ -0.57
BRCA1-209ENST00000470026 GMPPAQ96IJ6 420 aaPredicted RBP11.48□□□□□ -0.57
BRCA1-209ENST00000470026 MRPL37Q9BZE1 423 aaKnown RBP11.48□□□□□ -0.57
BRCA1-209ENST00000470026 MAP1LC3BQ9GZQ8 125 aa11.48□□□□□ -0.57
BRCA1-209ENST00000470026 CTDSP1Q9GZU7 261 aa11.48□□□□□ -0.57
BRCA1-209ENST00000470026 ARRDC1-AS1Q9H2J1 176 aa11.48□□□□□ -0.57
BRCA1-209ENST00000470026 RBKSQ9H477 322 aa11.48□□□□□ -0.57
BRCA1-209ENST00000470026 TMEM30CPA0ZSE6 113 aa11.47□□□□□ -0.57
BRCA1-209ENST00000470026 LNP1A1A4G5 178 aa11.47□□□□□ -0.57
BRCA1-209ENST00000470026 SEC14L6B5MCN3 397 aa11.47□□□□□ -0.57
BRCA1-209ENST00000470026 CYB5BO43169 146 aa11.47□□□□□ -0.57
BRCA1-209ENST00000470026 CD46P15529 392 aa11.47□□□□□ -0.57
BRCA1-209ENST00000470026 SELEP16581 610 aa11.47□□□□□ -0.57
BRCA1-209ENST00000470026 ZNF16P17020 682 aaPredicted RBP11.47□□□□□ -0.57
BRCA1-209ENST00000470026 FGF8P55075 233 aaPredicted RBP11.47□□□□□ -0.57
BRCA1-209ENST00000470026 ERVS71-1P61550 626 aa11.47□□□□□ -0.57
BRCA1-209ENST00000470026 PSG7Q13046 419 aa11.47□□□□□ -0.57
BRCA1-209ENST00000470026 ATP6V1FQ16864 119 aa11.47□□□□□ -0.57
BRCA1-209ENST00000470026 UBALD1Q8TB05 177 aa11.47□□□□□ -0.57
BRCA1-209ENST00000470026 SLC25A40Q8TBP6 338 aa11.47□□□□□ -0.57
BRCA1-209ENST00000470026 DEFB127Q9H1M4 99 aa11.47□□□□□ -0.57
BRCA1-209ENST00000470026 AHCTF1Q8WYP5 2266 aa11.47□□□□□ -0.57
BRCA1-209ENST00000470026 IFNA1P01562 189 aa11.47□□□□□ -0.57
BRCA1-209ENST00000470026 IGKV1D-33P01593 117 aa11.47□□□□□ -0.57
BRCA1-209ENST00000470026 IGKV1-33P01594 117 aa11.47□□□□□ -0.57
BRCA1-209ENST00000470026 TRGC2P03986 189 aa11.47□□□□□ -0.57
BRCA1-209ENST00000470026 IGHV1-2P23083 117 aa11.47□□□□□ -0.57
BRCA1-209ENST00000470026 BRWD1-AS2P59051 145 aa11.47□□□□□ -0.57
BRCA1-209ENST00000470026 RPL30P62888 115 aaKnown RBP11.47□□□□□ -0.57
BRCA1-209ENST00000470026 PYY3Q5JQD4 70 aa11.47□□□□□ -0.57
BRCA1-209ENST00000470026 SPNS3Q6ZMD2 512 aa11.47□□□□□ -0.57
BRCA1-209ENST00000470026 C11orf53Q8IXP5 236 aa11.47□□□□□ -0.57
BRCA1-209ENST00000470026 C1orf87Q8N0U7 546 aa11.47□□□□□ -0.57
BRCA1-209ENST00000470026 RPP25LQ8N5L8 163 aaKnown RBP11.47□□□□□ -0.57
BRCA1-209ENST00000470026 OR1L1Q8NH94 360 aa11.47□□□□□ -0.57
BRCA1-209ENST00000470026 FAM210BQ96KR6 192 aa11.47□□□□□ -0.57
BRCA1-209ENST00000470026 CDH20Q9HBT6 801 aa11.47□□□□□ -0.57
BRCA1-209ENST00000470026 R4GN57 208 aa11.47□□□□□ -0.57
BRCA1-209ENST00000470026 VPS13AQ96RL7 3174 aa11.46□□□□□ -0.57
BRCA1-209ENST00000470026 ELOA3CA0A087WX78 387 aaPredicted RBP11.46□□□□□ -0.57
BRCA1-209ENST00000470026 C12orf77C9JDV5 145 aa11.46□□□□□ -0.57
BRCA1-209ENST00000470026 CD81P60033 236 aa11.46□□□□□ -0.57
BRCA1-209ENST00000470026 TCTEX1D1Q8N7M0 179 aa11.46□□□□□ -0.57
BRCA1-209ENST00000470026 PRR7Q8TB68 274 aa11.46□□□□□ -0.57
BRCA1-209ENST00000470026 ABHD5Q8WTS1 349 aa11.46□□□□□ -0.57
BRCA1-209ENST00000470026 GALMQ96C23 342 aa11.46□□□□□ -0.57
BRCA1-209ENST00000470026 GAR1Q9NY12 217 aaKnown RBP11.46□□□□□ -0.57
BRCA1-209ENST00000470026 KCNIP1Q9NZI2 227 aa11.46□□□□□ -0.57
BRCA1-209ENST00000470026 DMRT1Q9Y5R6 373 aa11.46□□□□□ -0.57
BRCA1-209ENST00000470026 TECTAO75443 2155 aa11.46□□□□□ -0.58
BRCA1-209ENST00000470026 UBE2L5PA0A1B0GUS4 154 aa11.45□□□□□ -0.58
BRCA1-209ENST00000470026 OOEPA6NGQ2 149 aa11.45□□□□□ -0.58
BRCA1-209ENST00000470026 LRRC30A6NM36 301 aa11.45□□□□□ -0.58
BRCA1-209ENST00000470026 RAMP3O60896 148 aa11.45□□□□□ -0.58
BRCA1-209ENST00000470026 WISP2O76076 250 aa11.45□□□□□ -0.58
BRCA1-209ENST00000470026 OPN1MWP04001 364 aa11.45□□□□□ -0.58
BRCA1-209ENST00000470026 OPN1MW2P0DN77 364 aa11.45□□□□□ -0.58
BRCA1-209ENST00000470026 OPN1MW3P0DN78 364 aa11.45□□□□□ -0.58
BRCA1-209ENST00000470026 OR3A1P47881 315 aa11.45□□□□□ -0.58
BRCA1-209ENST00000470026 IDH3GP51553 393 aaPredicted RBP11.45□□□□□ -0.58
BRCA1-209ENST00000470026 GUSBP1Q15486 140 aa11.45□□□□□ -0.58
BRCA1-209ENST00000470026 VWC2Q2TAL6 325 aa11.45□□□□□ -0.58
BRCA1-209ENST00000470026 INO80CQ6PI98 192 aaPredicted RBP11.45□□□□□ -0.58
BRCA1-209ENST00000470026 FIP1L1Q6UN15 594 aaKnown RBP11.45□□□□□ -0.58
BRCA1-209ENST00000470026 VASH2Q86V25 355 aa11.45□□□□□ -0.58
BRCA1-209ENST00000470026 TMEM147Q9BVK8 224 aa11.45□□□□□ -0.58
BRCA1-209ENST00000470026 FREM2Q5SZK8 3169 aa11.45□□□□□ -0.58
BRCA1-209ENST00000470026 ODAMA1E959 279 aa11.45□□□□□ -0.58
BRCA1-209ENST00000470026 ZNF891A8MT65 544 aaPredicted RBP11.45□□□□□ -0.58
BRCA1-209ENST00000470026 CEBPZOSA8MTT3 80 aa11.45□□□□□ -0.58
BRCA1-209ENST00000470026 ZNF737O75373 536 aa11.45□□□□□ -0.58
BRCA1-209ENST00000470026 MDKP21741 143 aaPredicted RBP11.45□□□□□ -0.58
BRCA1-209ENST00000470026 UBE2NP61088 152 aaKnown RBP11.45□□□□□ -0.58
BRCA1-209ENST00000470026 TGFBR3Q03167 851 aa11.45□□□□□ -0.58
BRCA1-209ENST00000470026 DNLZQ5SXM8 178 aa11.45□□□□□ -0.58
BRCA1-209ENST00000470026 ACSM6Q6P461 480 aa11.45□□□□□ -0.58
BRCA1-209ENST00000470026 CYP2G1PQ6ZSU1 146 aa11.45□□□□□ -0.58
BRCA1-209ENST00000470026 HIST3H2BBQ8N257 126 aa11.45□□□□□ -0.58
BRCA1-209ENST00000470026 PYGO2Q9BRQ0 406 aa11.45□□□□□ -0.58
BRCA1-209ENST00000470026 BCL2L14Q9BZR8 327 aa11.45□□□□□ -0.58
BRCA1-209ENST00000470026 OR2D2Q9H210 308 aa11.45□□□□□ -0.58
BRCA1-209ENST00000470026 CLCF1Q9UBD9 225 aa11.45□□□□□ -0.58
BRCA1-209ENST00000470026 CHD3Q12873 2000 aaKnown RBP11.44□□□□□ -0.58
BRCA1-209ENST00000470026 RAB29O14966 203 aa11.44□□□□□ -0.58
BRCA1-209ENST00000470026 MLNRO43193 412 aa11.44□□□□□ -0.58
BRCA1-209ENST00000470026 CLDN1O95832 211 aa11.44□□□□□ -0.58
BRCA1-209ENST00000470026 CATR1Q13166 79 aa11.44□□□□□ -0.58
BRCA1-209ENST00000470026 PLA2G2CQ5R387 149 aa11.44□□□□□ -0.58
BRCA1-209ENST00000470026 KLF14Q8TD94 323 aaPredicted RBP11.44□□□□□ -0.58
BRCA1-209ENST00000470026 FRZBQ92765 325 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms