RNA–Protein interactions for RNA: ENST00000469975.5

C4A-250, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best)

Gene C4A, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-250ENST00000469975 TM2D1Q9BX74 207 aa13.08□□□□□ -0.32
C4A-250ENST00000469975 FBXL15Q9H469 300 aa13.08□□□□□ -0.32
C4A-250ENST00000469975 ABRACLQ9P1F3 81 aa13.08□□□□□ -0.32
C4A-250ENST00000469975 NKX1-2Q9UD57 310 aaPredicted RBP13.08□□□□□ -0.32
C4A-250ENST00000469975 TENM3Q9P273 2699 aa13.08□□□□□ -0.32
C4A-250ENST00000469975 SLC22A1O15245 554 aa13.07□□□□□ -0.32
C4A-250ENST00000469975 RAMP3O60896 148 aa13.07□□□□□ -0.32
C4A-250ENST00000469975 CT45A6P0DMU7 189 aa13.07□□□□□ -0.32
C4A-250ENST00000469975 CT45A5P0DMU8 189 aa13.07□□□□□ -0.32
C4A-250ENST00000469975 CT45A7P0DMV0 189 aa13.07□□□□□ -0.32
C4A-250ENST00000469975 OR5H8P0DN80 308 aa13.07□□□□□ -0.32
C4A-250ENST00000469975 SRMP19623 302 aa13.07□□□□□ -0.32
C4A-250ENST00000469975 SPHARQ15513 63 aa13.07□□□□□ -0.32
C4A-250ENST00000469975 LY6G6FQ5SQ64 297 aa13.07□□□□□ -0.32
C4A-250ENST00000469975 LIPKQ5VXJ0 399 aa13.07□□□□□ -0.32
C4A-250ENST00000469975 RNLSQ5VYX0 342 aa13.07□□□□□ -0.32
C4A-250ENST00000469975 LIN54Q6MZP7 749 aa13.07□□□□□ -0.32
C4A-250ENST00000469975 ZNF880Q6PDB4 577 aa13.07□□□□□ -0.32
C4A-250ENST00000469975 TMEM65Q6PI78 240 aa13.07□□□□□ -0.32
C4A-250ENST00000469975 NPBQ8NG41 125 aa13.07□□□□□ -0.32
C4A-250ENST00000469975 KCNG3Q8TAE7 436 aa13.07□□□□□ -0.32
C4A-250ENST00000469975 PHYHIPQ92561 330 aa13.07□□□□□ -0.32
C4A-250ENST00000469975 UBE2E2Q96LR5 201 aa13.07□□□□□ -0.32
C4A-250ENST00000469975 LPAR5Q9H1C0 372 aa13.07□□□□□ -0.32
C4A-250ENST00000469975 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.07□□□□□ -0.32
C4A-250ENST00000469975 OR1A1Q9P1Q5 309 aa13.07□□□□□ -0.32
C4A-250ENST00000469975 AK3Q9UIJ7 227 aa13.07□□□□□ -0.32
C4A-250ENST00000469975 VSIG4Q9Y279 399 aa13.07□□□□□ -0.32
C4A-250ENST00000469975 A3GALT2U3KPV4 340 aa13.07□□□□□ -0.32
C4A-250ENST00000469975 FCN1O00602 326 aa13.06□□□□□ -0.32
C4A-250ENST00000469975 SOX15O60248 233 aa13.06□□□□□ -0.32
C4A-250ENST00000469975 NDUFA3O95167 84 aa13.06□□□□□ -0.32
C4A-250ENST00000469975 UCHL1P09936 223 aa13.06□□□□□ -0.32
C4A-250ENST00000469975 RAB9AP51151 201 aa13.06□□□□□ -0.32
C4A-250ENST00000469975 RPS25P62851 125 aaKnown RBP13.06□□□□□ -0.32
C4A-250ENST00000469975 IRF3Q14653 427 aa13.06□□□□□ -0.32
C4A-250ENST00000469975 WWC2-AS2Q96NR7 200 aa13.06□□□□□ -0.32
C4A-250ENST00000469975 PLEKHJ1Q9NW61 149 aa13.06□□□□□ -0.32
C4A-250ENST00000469975 KIAA1456Q9P272 454 aa13.06□□□□□ -0.32
C4A-250ENST00000469975 STEAP1Q9UHE8 339 aa13.06□□□□□ -0.32
C4A-250ENST00000469975 SLC23A1Q9UHI7 598 aa13.06□□□□□ -0.32
C4A-250ENST00000469975 GAB2Q9UQC2 676 aa13.06□□□□□ -0.32
C4A-250ENST00000469975 A0A1W2PN81 502 aa13.05□□□□□ -0.32
C4A-250ENST00000469975 BPNT1O95861 308 aa13.05□□□□□ -0.32
C4A-250ENST00000469975 CD37P11049 281 aa13.05□□□□□ -0.32
C4A-250ENST00000469975 CHRNA7P36544 502 aa13.05□□□□□ -0.32
C4A-250ENST00000469975 LINC00205P59089 165 aa13.05□□□□□ -0.32
C4A-250ENST00000469975 C19orf54Q5BKX5 351 aa13.05□□□□□ -0.32
C4A-250ENST00000469975 TMEM91Q6ZNR0 172 aa13.05□□□□□ -0.32
C4A-250ENST00000469975 DRAXINQ8NBI3 349 aaPredicted RBP13.05□□□□□ -0.32
C4A-250ENST00000469975 MINDY2Q8NBR6 621 aa13.05□□□□□ -0.32
C4A-250ENST00000469975 DCUN1D4Q92564 292 aa13.05□□□□□ -0.32
C4A-250ENST00000469975 CLCC1Q96S66 551 aa13.05□□□□□ -0.32
C4A-250ENST00000469975 ZMAT5Q9UDW3 170 aaKnown RBP13.05□□□□□ -0.32
C4A-250ENST00000469975 RNF150Q9ULK6 438 aa13.05□□□□□ -0.32
C4A-250ENST00000469975 AK6Q9Y3D8 172 aaKnown RBP13.05□□□□□ -0.32
C4A-250ENST00000469975 LRRC42Q9Y546 428 aa13.05□□□□□ -0.32
C4A-250ENST00000469975 HUWE1Q7Z6Z7 4374 aaKnown RBP13.05□□□□□ -0.32
C4A-250ENST00000469975 H0YJW9 148 aa13.04□□□□□ -0.32
C4A-250ENST00000469975 RAB29O14966 203 aa13.04□□□□□ -0.32
C4A-250ENST00000469975 LY86O95711 162 aa13.04□□□□□ -0.32
C4A-250ENST00000469975 SCTP09683 121 aa13.04□□□□□ -0.32
C4A-250ENST00000469975 OR8U8P0C7N1 319 aa13.04□□□□□ -0.32
C4A-250ENST00000469975 HSMCR30P0CW71 290 aa13.04□□□□□ -0.32
C4A-250ENST00000469975 EGR2P11161 476 aaPredicted RBP13.04□□□□□ -0.32
C4A-250ENST00000469975 SLURP1P55000 103 aa13.04□□□□□ -0.32
C4A-250ENST00000469975 AQP4P55087 323 aa13.04□□□□□ -0.32
C4A-250ENST00000469975 CLDN12P56749 244 aa13.04□□□□□ -0.32
C4A-250ENST00000469975 CX3CL1P78423 397 aa13.04□□□□□ -0.32
C4A-250ENST00000469975 ZNF616Q08AN1 781 aa13.04□□□□□ -0.32
C4A-250ENST00000469975 PLA2G7Q13093 441 aa13.04□□□□□ -0.32
C4A-250ENST00000469975 DCTN2Q13561 401 aaKnown RBP13.04□□□□□ -0.32
C4A-250ENST00000469975 OR6M1Q8NGM8 313 aa13.04□□□□□ -0.32
C4A-250ENST00000469975 ABHD5Q8WTS1 349 aa13.04□□□□□ -0.32
C4A-250ENST00000469975 NRG4Q8WWG1 115 aa13.04□□□□□ -0.32
C4A-250ENST00000469975 UFD1Q92890 307 aa13.04□□□□□ -0.32
C4A-250ENST00000469975 CHCHD6Q9BRQ6 235 aa13.04□□□□□ -0.32
C4A-250ENST00000469975 FAM103A1Q9BTL3 118 aaKnown RBP13.04□□□□□ -0.32
C4A-250ENST00000469975 C11orf54Q9H0W9 315 aaPredicted RBP13.04□□□□□ -0.32
C4A-250ENST00000469975 PLGRKTQ9HBL7 147 aa13.04□□□□□ -0.32
C4A-250ENST00000469975 PIPOXQ9P0Z9 390 aa13.04□□□□□ -0.32
C4A-250ENST00000469975 SORL1Q92673 2214 aa13.03□□□□□ -0.32
C4A-250ENST00000469975 FOXI3A8MTJ6 420 aaPredicted RBP13.03□□□□□ -0.32
C4A-250ENST00000469975 H7C2Y5 167 aa13.03□□□□□ -0.32
C4A-250ENST00000469975 RRHO14718 337 aa13.03□□□□□ -0.32
C4A-250ENST00000469975 PROP1O75360 226 aa13.03□□□□□ -0.32
C4A-250ENST00000469975 CEACAM6P40199 344 aa13.03□□□□□ -0.32
C4A-250ENST00000469975 TMEM50BP56557 158 aa13.03□□□□□ -0.32
C4A-250ENST00000469975 HLA-DRB3P79483 266 aa13.03□□□□□ -0.32
C4A-250ENST00000469975 RUNX1Q01196 453 aa13.03□□□□□ -0.32
C4A-250ENST00000469975 PLGLAQ15195 96 aa13.03□□□□□ -0.32
C4A-250ENST00000469975 FAM71F2Q6NXP2 309 aa13.03□□□□□ -0.32
C4A-250ENST00000469975 ARHGAP5-AS1Q96IT6 56 aa13.03□□□□□ -0.32
C4A-250ENST00000469975 AGMATQ9BSE5 352 aa13.03□□□□□ -0.32
C4A-250ENST00000469975 VCXQ9H320 206 aa13.03□□□□□ -0.32
C4A-250ENST00000469975 SCN3BQ9NY72 215 aa13.03□□□□□ -0.32
C4A-250ENST00000469975 ZNF256Q9Y2P7 627 aaPredicted RBP13.03□□□□□ -0.32
C4A-250ENST00000469975 U3KQK5 164 aa13.03□□□□□ -0.32
C4A-250ENST00000469975 TRBV6-6A0A0A6YYG2 114 aa13.02□□□□□ -0.33
C4A-250ENST00000469975 IGKV1-6A0A0C4DH72 117 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms