RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 KCNK7Q9Y2U2 307 aa14.3□□□□□ -0.12
CGREF1-208ENST00000467539 SAA2-SAA4A0A096LPE2 208 aa14.29□□□□□ -0.12
CGREF1-208ENST00000467539 TRDCB7Z8K6 153 aa14.29□□□□□ -0.12
CGREF1-208ENST00000467539 ST8SIA5O15466 376 aa14.29□□□□□ -0.12
CGREF1-208ENST00000467539 SAA2P0DJI9 122 aaPredicted RBP14.29□□□□□ -0.12
CGREF1-208ENST00000467539 SOX6P35712 828 aa14.29□□□□□ -0.12
CGREF1-208ENST00000467539 HLA-DRB3P79483 266 aa14.29□□□□□ -0.12
CGREF1-208ENST00000467539 TEX38Q6PEX7 206 aa14.29□□□□□ -0.12
CGREF1-208ENST00000467539 OR10R2Q8NGX6 335 aa14.29□□□□□ -0.12
CGREF1-208ENST00000467539 EDARADDQ8WWZ3 215 aa14.29□□□□□ -0.12
CGREF1-208ENST00000467539 PHF21AQ96BD5 680 aa14.29□□□□□ -0.12
CGREF1-208ENST00000467539 C11orf54Q9H0W9 315 aaPredicted RBP14.29□□□□□ -0.12
CGREF1-208ENST00000467539 TXNL4BQ9NX01 149 aaKnown RBP14.29□□□□□ -0.12
CGREF1-208ENST00000467539 TGP01266 2768 aa14.29□□□□□ -0.12
CGREF1-208ENST00000467539 METTL21EPA6NDL7 271 aa14.28□□□□□ -0.12
CGREF1-208ENST00000467539 RAB27BO00194 218 aa14.28□□□□□ -0.12
CGREF1-208ENST00000467539 HSPA12AO43301 675 aa14.28□□□□□ -0.12
CGREF1-208ENST00000467539 CD3GP09693 182 aa14.28□□□□□ -0.12
CGREF1-208ENST00000467539 CT45A6P0DMU7 189 aa14.28□□□□□ -0.12
CGREF1-208ENST00000467539 CT45A5P0DMU8 189 aa14.28□□□□□ -0.12
CGREF1-208ENST00000467539 CT45A7P0DMV0 189 aa14.28□□□□□ -0.12
CGREF1-208ENST00000467539 CD33P20138 364 aa14.28□□□□□ -0.12
CGREF1-208ENST00000467539 SLC6A1P30531 599 aa14.28□□□□□ -0.12
CGREF1-208ENST00000467539 ACTBP60709 375 aa14.28□□□□□ -0.12
CGREF1-208ENST00000467539 RPL23AP62750 156 aaKnown RBP14.28□□□□□ -0.12
CGREF1-208ENST00000467539 MOGAT2Q3SYC2 334 aa14.28□□□□□ -0.12
CGREF1-208ENST00000467539 ZNF773Q6PK81 442 aa14.28□□□□□ -0.12
CGREF1-208ENST00000467539 TPRA1Q86W33 373 aa14.28□□□□□ -0.12
CGREF1-208ENST00000467539 NR2C2APQ86WQ0 139 aa14.28□□□□□ -0.12
CGREF1-208ENST00000467539 NPBQ8NG41 125 aa14.28□□□□□ -0.12
CGREF1-208ENST00000467539 CHCHD6Q9BRQ6 235 aa14.28□□□□□ -0.12
CGREF1-208ENST00000467539 PARP12Q9H0J9 701 aaKnown RBP14.28□□□□□ -0.12
CGREF1-208ENST00000467539 OR1A1Q9P1Q5 309 aa14.28□□□□□ -0.12
CGREF1-208ENST00000467539 ZNF580Q9UK33 172 aa14.28□□□□□ -0.12
CGREF1-208ENST00000467539 STUB1Q9UNE7 303 aa14.28□□□□□ -0.12
CGREF1-208ENST00000467539 SSR3Q9UNL2 185 aa14.28□□□□□ -0.12
CGREF1-208ENST00000467539 IGKV1-6A0A0C4DH72 117 aa14.27□□□□□ -0.13
CGREF1-208ENST00000467539 PF4P02776 101 aa14.27□□□□□ -0.13
CGREF1-208ENST00000467539 IGF1P05019 195 aa14.27□□□□□ -0.13
CGREF1-208ENST00000467539 GADD45AP24522 165 aa14.27□□□□□ -0.13
CGREF1-208ENST00000467539 MC5RP33032 325 aa14.27□□□□□ -0.13
CGREF1-208ENST00000467539 MRPS15P82914 257 aaKnown RBP14.27□□□□□ -0.13
CGREF1-208ENST00000467539 MMDQ15546 238 aa14.27□□□□□ -0.13
CGREF1-208ENST00000467539 KHDC1LQ5JSQ8 128 aa14.27□□□□□ -0.13
CGREF1-208ENST00000467539 ABHD14BQ96IU4 210 aa14.27□□□□□ -0.13
CGREF1-208ENST00000467539 HSPB9Q9BQS6 159 aa14.27□□□□□ -0.13
CGREF1-208ENST00000467539 TOLLIPQ9H0E2 274 aa14.27□□□□□ -0.13
CGREF1-208ENST00000467539 NOTOA8MTQ0 251 aa14.26□□□□□ -0.13
CGREF1-208ENST00000467539 RRP9O43818 475 aaKnown RBP14.26□□□□□ -0.13
CGREF1-208ENST00000467539 PROP1O75360 226 aa14.26□□□□□ -0.13
CGREF1-208ENST00000467539 SLC2A2P11168 524 aaPredicted RBP14.26□□□□□ -0.13
CGREF1-208ENST00000467539 RPL39P5Q59GN2 51 aa14.26□□□□□ -0.13
CGREF1-208ENST00000467539 RNF152Q8N8N0 203 aa14.26□□□□□ -0.13
CGREF1-208ENST00000467539 OR5AN1Q8NGI8 311 aa14.26□□□□□ -0.13
CGREF1-208ENST00000467539 OR4A4PQ8NGN8 299 aa14.26□□□□□ -0.13
CGREF1-208ENST00000467539 A0A0B4J203 849 aa14.25□□□□□ -0.13
CGREF1-208ENST00000467539 MFNGO00587 321 aa14.25□□□□□ -0.13
CGREF1-208ENST00000467539 NBR2O15453 112 aa14.25□□□□□ -0.13
CGREF1-208ENST00000467539 ELANEP08246 267 aa14.25□□□□□ -0.13
CGREF1-208ENST00000467539 HIST1H1DP16402 221 aaKnown RBP14.25□□□□□ -0.13
CGREF1-208ENST00000467539 GNB3P16520 340 aa14.25□□□□□ -0.13
CGREF1-208ENST00000467539 CNTFRP26992 372 aa14.25□□□□□ -0.13
CGREF1-208ENST00000467539 SERPINB10P48595 397 aa14.25□□□□□ -0.13
CGREF1-208ENST00000467539 FOXE3Q13461 319 aa14.25□□□□□ -0.13
CGREF1-208ENST00000467539 SRSF7Q16629 238 aaKnown RBP eCLIP14.25□□□□□ -0.13
CGREF1-208ENST00000467539 C5orf64Q2M2E5 130 aa14.25□□□□□ -0.13
CGREF1-208ENST00000467539 LIN54Q6MZP7 749 aa14.25□□□□□ -0.13
CGREF1-208ENST00000467539 RNF5Q99942 180 aa14.25□□□□□ -0.13
CGREF1-208ENST00000467539 ZNF107Q9UII5 783 aaPredicted RBP14.25□□□□□ -0.13
CGREF1-208ENST00000467539 RNF150Q9ULK6 438 aa14.25□□□□□ -0.13
CGREF1-208ENST00000467539 OR5H14A6NHG9 310 aa14.24□□□□□ -0.13
CGREF1-208ENST00000467539 FABP7O15540 132 aa14.24□□□□□ -0.13
CGREF1-208ENST00000467539 NDUFA3O95167 84 aa14.24□□□□□ -0.13
CGREF1-208ENST00000467539 DIRAS3O95661 229 aa14.24□□□□□ -0.13
CGREF1-208ENST00000467539 IGHG4P01861 327 aa14.24□□□□□ -0.13
CGREF1-208ENST00000467539 HLA-DRB1P01911 266 aa14.24□□□□□ -0.13
CGREF1-208ENST00000467539 FCGR3AP08637 254 aa14.24□□□□□ -0.13
CGREF1-208ENST00000467539 IGLL1P15814 213 aa14.24□□□□□ -0.13
CGREF1-208ENST00000467539 MYCNOSP40205 109 aa14.24□□□□□ -0.13
CGREF1-208ENST00000467539 THBS3P49746 956 aa14.24□□□□□ -0.13
CGREF1-208ENST00000467539 CFHR3Q02985 330 aa14.24□□□□□ -0.13
CGREF1-208ENST00000467539 KIR2DS1Q14954 304 aa14.24□□□□□ -0.13
CGREF1-208ENST00000467539 ARL6IP1Q15041 203 aa14.24□□□□□ -0.13
CGREF1-208ENST00000467539 KCTD21Q4G0X4 260 aa14.24□□□□□ -0.13
CGREF1-208ENST00000467539 REC114Q7Z4M0 266 aa14.24□□□□□ -0.13
CGREF1-208ENST00000467539 RCC1LQ96I51 464 aaKnown RBP14.24□□□□□ -0.13
CGREF1-208ENST00000467539 CENPOQ9BU64 300 aa14.24□□□□□ -0.13
CGREF1-208ENST00000467539 ATG5Q9H1Y0 275 aa14.24□□□□□ -0.13
CGREF1-208ENST00000467539 OR51E2Q9H255 320 aa14.24□□□□□ -0.13
CGREF1-208ENST00000467539 RDH8Q9NYR8 311 aa14.24□□□□□ -0.13
CGREF1-208ENST00000467539 ZNF221Q9UK13 617 aa14.24□□□□□ -0.13
CGREF1-208ENST00000467539 GAB2Q9UQC2 676 aa14.24□□□□□ -0.13
CGREF1-208ENST00000467539 RRP15Q9Y3B9 282 aaKnown RBP14.24□□□□□ -0.13
CGREF1-208ENST00000467539 PRKDCP78527 4128 aaKnown RBP14.23□□□□□ -0.13
CGREF1-208ENST00000467539 H0YJW9 148 aa14.23□□□□□ -0.13
CGREF1-208ENST00000467539 RBBP9O75884 186 aa14.23□□□□□ -0.13
CGREF1-208ENST00000467539 DUS4LO95620 317 aaKnown RBP14.23□□□□□ -0.13
CGREF1-208ENST00000467539 GSTT2P0CG29 244 aa14.23□□□□□ -0.13
CGREF1-208ENST00000467539 GSTT2BP0CG30 244 aa14.23□□□□□ -0.13
CGREF1-208ENST00000467539 OR5H8P0DN80 308 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms