RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 GPN1Q9HCN4 374 aaPredicted RBP4.99□□□□□ -1.61
CHMP3-206ENST00000466032 IL36RNQ9UBH0 155 aa4.99□□□□□ -1.61
CHMP3-206ENST00000466032 POLR3KQ9Y2Y1 108 aaPredicted RBP4.99□□□□□ -1.61
CHMP3-206ENST00000466032 FLNCQ14315 2725 aa4.99□□□□□ -1.61
CHMP3-206ENST00000466032 CHD3Q12873 2000 aaKnown RBP4.98□□□□□ -1.61
CHMP3-206ENST00000466032 IGHV3OR15-7A0A075B7D8 119 aa4.98□□□□□ -1.61
CHMP3-206ENST00000466032 PCP4L1A6NKN8 68 aa4.98□□□□□ -1.61
CHMP3-206ENST00000466032 HMSDA8MTL9 139 aa4.98□□□□□ -1.61
CHMP3-206ENST00000466032 LINC00587B1AMM8 73 aa4.98□□□□□ -1.61
CHMP3-206ENST00000466032 M0R1W7 72 aa4.98□□□□□ -1.61
CHMP3-206ENST00000466032 F2RL2O00254 374 aa4.98□□□□□ -1.61
CHMP3-206ENST00000466032 UBE2CO00762 179 aa4.98□□□□□ -1.61
CHMP3-206ENST00000466032 HSPB6O14558 160 aa4.98□□□□□ -1.61
CHMP3-206ENST00000466032 ENSAO43768 121 aaKnown RBP4.98□□□□□ -1.61
CHMP3-206ENST00000466032 LANCL1O43813 399 aa4.98□□□□□ -1.61
CHMP3-206ENST00000466032 SSX4O60224 188 aa4.98□□□□□ -1.61
CHMP3-206ENST00000466032 YPEL1O60688 119 aa4.98□□□□□ -1.61
CHMP3-206ENST00000466032 IFNA2P01563 188 aa4.98□□□□□ -1.61
CHMP3-206ENST00000466032 IGHV4-39P01824 125 aa4.98□□□□□ -1.61
CHMP3-206ENST00000466032 ZNF728P0DKX0 622 aa4.98□□□□□ -1.61
CHMP3-206ENST00000466032 SELLP14151 372 aa4.98□□□□□ -1.61
CHMP3-206ENST00000466032 FPR2P25090 351 aa4.98□□□□□ -1.61
CHMP3-206ENST00000466032 MECP2P51608 486 aaKnown RBP4.98□□□□□ -1.61
CHMP3-206ENST00000466032 HERV-K104P61576 105 aa4.98□□□□□ -1.61
CHMP3-206ENST00000466032 AESQ08117 197 aa4.98□□□□□ -1.61
CHMP3-206ENST00000466032 BTN1A1Q13410 526 aa4.98□□□□□ -1.61
CHMP3-206ENST00000466032 PDCD1Q15116 288 aa4.98□□□□□ -1.61
CHMP3-206ENST00000466032 DEFB113Q30KQ7 82 aa4.98□□□□□ -1.61
CHMP3-206ENST00000466032 SPRNQ5BIV9 151 aa4.98□□□□□ -1.61
CHMP3-206ENST00000466032 RNASE12Q5GAN4 147 aaKnown RBP4.98□□□□□ -1.61
CHMP3-206ENST00000466032 WDR25Q64LD2 544 aaPredicted RBP4.98□□□□□ -1.61
CHMP3-206ENST00000466032 HEPN1Q6WQI6 88 aa4.98□□□□□ -1.61
CHMP3-206ENST00000466032 MRPL52Q86TS9 123 aaKnown RBP4.98□□□□□ -1.61
CHMP3-206ENST00000466032 RTN4RL2Q86UN3 420 aa4.98□□□□□ -1.61
CHMP3-206ENST00000466032 LHFPL1Q86WI0 220 aa4.98□□□□□ -1.61
CHMP3-206ENST00000466032 C12orf45Q8N5I9 185 aaPredicted RBP4.98□□□□□ -1.61
CHMP3-206ENST00000466032 TEX29Q8N6K0 151 aa4.98□□□□□ -1.61
CHMP3-206ENST00000466032 CCDC71LQ8N9Z2 235 aa4.98□□□□□ -1.61
CHMP3-206ENST00000466032 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.98□□□□□ -1.61
CHMP3-206ENST00000466032 OR51S1Q8NGJ8 323 aa4.98□□□□□ -1.61
CHMP3-206ENST00000466032 PLPPR1Q8TBJ4 325 aa4.98□□□□□ -1.61
CHMP3-206ENST00000466032 C10orf105Q8TEF2 133 aa4.98□□□□□ -1.61
CHMP3-206ENST00000466032 ARL11Q969Q4 196 aa4.98□□□□□ -1.61
CHMP3-206ENST00000466032 COQ2Q96H96 371 aa4.98□□□□□ -1.61
CHMP3-206ENST00000466032 ZNF714Q96N38 554 aa4.98□□□□□ -1.61
CHMP3-206ENST00000466032 YPEL2Q96QA6 119 aa4.98□□□□□ -1.61
CHMP3-206ENST00000466032 DCTN5Q9BTE1 182 aa4.98□□□□□ -1.61
CHMP3-206ENST00000466032 SSBP3Q9BWW4 388 aaPredicted RBP4.98□□□□□ -1.61
CHMP3-206ENST00000466032 C19orf12Q9NSK7 152 aa4.98□□□□□ -1.61
CHMP3-206ENST00000466032 FAM212BQ9NTI7 297 aaPredicted RBP4.98□□□□□ -1.61
CHMP3-206ENST00000466032 METTL1Q9UBP6 276 aaKnown RBP4.98□□□□□ -1.61
CHMP3-206ENST00000466032 MLXQ9UH92 298 aa4.98□□□□□ -1.61
CHMP3-206ENST00000466032 GAB2Q9UQC2 676 aa4.98□□□□□ -1.61
CHMP3-206ENST00000466032 C14orf166Q9Y224 244 aaKnown RBP4.98□□□□□ -1.61
CHMP3-206ENST00000466032 KCNIP3Q9Y2W7 256 aa4.98□□□□□ -1.61
CHMP3-206ENST00000466032 OR2W1Q9Y3N9 320 aa4.98□□□□□ -1.61
CHMP3-206ENST00000466032 ALG5Q9Y673 324 aa4.98□□□□□ -1.61
CHMP3-206ENST00000466032 CACNA1DQ01668 2161 aa4.98□□□□□ -1.61
CHMP3-206ENST00000466032 TENM4Q6N022 2769 aa4.98□□□□□ -1.61
CHMP3-206ENST00000466032 LOC105371242A0A075B767 164 aa4.97□□□□□ -1.61
CHMP3-206ENST00000466032 TRAV20A0A0B4J274 112 aa4.97□□□□□ -1.61
CHMP3-206ENST00000466032 RAB19A4D1S5 217 aa4.97□□□□□ -1.61
CHMP3-206ENST00000466032 MEIS3P1A6NDR6 274 aa4.97□□□□□ -1.61
CHMP3-206ENST00000466032 RNF212BA8MTL3 300 aa4.97□□□□□ -1.61
CHMP3-206ENST00000466032 SNRPGP15A8MWD9 76 aa4.97□□□□□ -1.61
CHMP3-206ENST00000466032 VWC2LB2RUY7 222 aa4.97□□□□□ -1.61
CHMP3-206ENST00000466032 INMT-MINDY4F8WBC2 141 aa4.97□□□□□ -1.61
CHMP3-206ENST00000466032 PYCARD-AS1I3L0S3 204 aa4.97□□□□□ -1.61
CHMP3-206ENST00000466032 TUSC2O75896 110 aa4.97□□□□□ -1.61
CHMP3-206ENST00000466032 PPYP01298 95 aa4.97□□□□□ -1.61
CHMP3-206ENST00000466032 IGHV2-5P01817 119 aa4.97□□□□□ -1.61
CHMP3-206ENST00000466032 HBZP02008 142 aa4.97□□□□□ -1.61
CHMP3-206ENST00000466032 PMP2P02689 132 aa4.97□□□□□ -1.61
CHMP3-206ENST00000466032 IL5P05113 134 aa4.97□□□□□ -1.61
CHMP3-206ENST00000466032 CTSDP07339 412 aaPredicted RBP4.97□□□□□ -1.61
CHMP3-206ENST00000466032 NMBP08949 121 aa4.97□□□□□ -1.61
CHMP3-206ENST00000466032 PPIAL4GP0DN37 164 aa4.97□□□□□ -1.61
CHMP3-206ENST00000466032 CGB3P0DN86 165 aa4.97□□□□□ -1.61
CHMP3-206ENST00000466032 CGB7P0DN87 165 aa4.97□□□□□ -1.61
CHMP3-206ENST00000466032 PTHLHP12272 177 aa4.97□□□□□ -1.61
CHMP3-206ENST00000466032 RCC1P18754 421 aaPredicted RBP4.97□□□□□ -1.61
CHMP3-206ENST00000466032 FCGR2CP31995 323 aa4.97□□□□□ -1.61
CHMP3-206ENST00000466032 GLIPR1P48060 266 aa4.97□□□□□ -1.61
CHMP3-206ENST00000466032 LUMP51884 338 aaPredicted RBP4.97□□□□□ -1.61
CHMP3-206ENST00000466032 PRRX1P54821 245 aa4.97□□□□□ -1.61
CHMP3-206ENST00000466032 SRPXP78539 464 aa4.97□□□□□ -1.61
CHMP3-206ENST00000466032 MADCAM1Q13477 382 aa4.97□□□□□ -1.61
CHMP3-206ENST00000466032 EDDM3AQ14507 147 aa4.97□□□□□ -1.61
CHMP3-206ENST00000466032 CARTPTQ16568 116 aa4.97□□□□□ -1.61
CHMP3-206ENST00000466032 SCGB2B2Q4G0G5 96 aa4.97□□□□□ -1.61
CHMP3-206ENST00000466032 ABCA11PQ4W5N1 156 aa4.97□□□□□ -1.61
CHMP3-206ENST00000466032 TMEM128Q5BJH2 165 aa4.97□□□□□ -1.61
CHMP3-206ENST00000466032 FAM201AQ5SY85 155 aa4.97□□□□□ -1.61
CHMP3-206ENST00000466032 C10orf91Q5T1B1 145 aa4.97□□□□□ -1.61
CHMP3-206ENST00000466032 DHRS7BQ6IAN0 325 aaPredicted RBP4.97□□□□□ -1.61
CHMP3-206ENST00000466032 BTNL3Q6UXE8 466 aa4.97□□□□□ -1.61
CHMP3-206ENST00000466032 ZNF841Q6ZN19 808 aa4.97□□□□□ -1.61
CHMP3-206ENST00000466032 KCTD9Q7L273 389 aa4.97□□□□□ -1.61
CHMP3-206ENST00000466032 H1FOOQ8IZA3 346 aaPredicted RBP4.97□□□□□ -1.61
CHMP3-206ENST00000466032 SPAG16Q8N0X2 631 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms