RNA–Protein interactions for RNA: ENST00000465892.6

TGFBR3-204, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-204ENST00000465892 VAMP8Q9BV40 100 aa11.83□□□□□ -0.51
TGFBR3-204ENST00000465892 AKIRIN1Q9H9L7 192 aaPredicted RBP11.83□□□□□ -0.51
TGFBR3-204ENST00000465892 RYDENQ9NUL5 291 aaKnown RBP11.83□□□□□ -0.51
TGFBR3-204ENST00000465892 PXMP4Q9Y6I8 212 aa11.83□□□□□ -0.51
TGFBR3-204ENST00000465892 R4GN57 208 aa11.83□□□□□ -0.51
TGFBR3-204ENST00000465892 IGHV1OR21-1A0A087WYE8 117 aa11.83□□□□□ -0.52
TGFBR3-204ENST00000465892 TMEM250H0YL14 139 aa11.83□□□□□ -0.52
TGFBR3-204ENST00000465892 SERF1AO75920 110 aa11.83□□□□□ -0.52
TGFBR3-204ENST00000465892 COL8A2P25067 703 aa11.83□□□□□ -0.52
TGFBR3-204ENST00000465892 RAB7AP51149 207 aa11.83□□□□□ -0.52
TGFBR3-204ENST00000465892 TFF3Q07654 80 aa11.83□□□□□ -0.52
TGFBR3-204ENST00000465892 GCSAMLQ5JQS6 135 aa11.83□□□□□ -0.52
TGFBR3-204ENST00000465892 Q6ZSR3 168 aa11.83□□□□□ -0.52
TGFBR3-204ENST00000465892 TP53TG3Q9ULZ0 132 aa11.83□□□□□ -0.52
TGFBR3-204ENST00000465892 USF3Q68DE3 2245 aa11.83□□□□□ -0.52
TGFBR3-204ENST00000465892 hCG_38984A0A1B0GV85 526 aa11.83□□□□□ -0.52
TGFBR3-204ENST00000465892 LINC00614P0C842 121 aa11.83□□□□□ -0.52
TGFBR3-204ENST00000465892 SRP14P37108 136 aaKnown RBP11.83□□□□□ -0.52
TGFBR3-204ENST00000465892 RPP30P78346 268 aaKnown RBP11.83□□□□□ -0.52
TGFBR3-204ENST00000465892 TMEM42Q69YG0 159 aa11.83□□□□□ -0.52
TGFBR3-204ENST00000465892 RHBDD2Q6NTF9 364 aa11.83□□□□□ -0.52
TGFBR3-204ENST00000465892 LINC01551Q86U37 167 aa11.83□□□□□ -0.52
TGFBR3-204ENST00000465892 NEIL1Q96FI4 390 aaPredicted RBP11.83□□□□□ -0.52
TGFBR3-204ENST00000465892 CLN8Q9UBY8 286 aa11.83□□□□□ -0.52
TGFBR3-204ENST00000465892 RNF114Q9Y508 228 aa11.83□□□□□ -0.52
TGFBR3-204ENST00000465892 COL5A1P20908 1838 aaPredicted RBP11.82□□□□□ -0.52
TGFBR3-204ENST00000465892 TNFSF13O75888 250 aa11.82□□□□□ -0.52
TGFBR3-204ENST00000465892 IL6RP08887 468 aaPredicted RBP11.82□□□□□ -0.52
TGFBR3-204ENST00000465892 ZNF709Q8N972 641 aa11.82□□□□□ -0.52
TGFBR3-204ENST00000465892 RNASE8Q8TDE3 154 aaKnown RBP11.82□□□□□ -0.52
TGFBR3-204ENST00000465892 TUBG2Q9NRH3 451 aa11.82□□□□□ -0.52
TGFBR3-204ENST00000465892 MTCH1Q9NZJ7 389 aa11.82□□□□□ -0.52
TGFBR3-204ENST00000465892 ATP23Q9Y6H3 246 aa11.82□□□□□ -0.52
TGFBR3-204ENST00000465892 FREM1Q5H8C1 2179 aa11.82□□□□□ -0.52
TGFBR3-204ENST00000465892 AQP7O14520 342 aa11.82□□□□□ -0.52
TGFBR3-204ENST00000465892 RBFOX2O43251 390 aaKnown RBP eCLIP11.82□□□□□ -0.525e-7■■■■□ 21.2
TGFBR3-204ENST00000465892 TYMSP04818 313 aa11.82□□□□□ -0.52
TGFBR3-204ENST00000465892 CHRNB4P30926 498 aa11.82□□□□□ -0.52
TGFBR3-204ENST00000465892 KRTDAPP60985 99 aa11.82□□□□□ -0.52
TGFBR3-204ENST00000465892 CLDN23Q96B33 292 aa11.82□□□□□ -0.52
TGFBR3-204ENST00000465892 SAMD10Q9BYL1 202 aa11.82□□□□□ -0.52
TGFBR3-204ENST00000465892 SRXN1Q9BYN0 137 aa11.82□□□□□ -0.52
TGFBR3-204ENST00000465892 TMEM9BQ9NQ34 198 aa11.82□□□□□ -0.52
TGFBR3-204ENST00000465892 OR2W1Q9Y3N9 320 aa11.82□□□□□ -0.52
TGFBR3-204ENST00000465892 SYNGR1O43759 233 aa11.81□□□□□ -0.52
TGFBR3-204ENST00000465892 SPINK4O60575 86 aa11.81□□□□□ -0.52
TGFBR3-204ENST00000465892 UMODP07911 640 aa11.81□□□□□ -0.52
TGFBR3-204ENST00000465892 S100GP29377 79 aa11.81□□□□□ -0.52
TGFBR3-204ENST00000465892 SOX8P57073 446 aa11.81□□□□□ -0.52
TGFBR3-204ENST00000465892 LINC00310P59036 64 aa11.81□□□□□ -0.52
TGFBR3-204ENST00000465892 GNB1P62873 340 aa11.81□□□□□ -0.52
TGFBR3-204ENST00000465892 MRPS21P82921 87 aaKnown RBP11.81□□□□□ -0.52
TGFBR3-204ENST00000465892 OR56B2PQ8NGI1 322 aa11.81□□□□□ -0.52
TGFBR3-204ENST00000465892 OR1L1Q8NH94 360 aa11.81□□□□□ -0.52
TGFBR3-204ENST00000465892 CIB3Q96Q77 187 aaPredicted RBP11.81□□□□□ -0.52
TGFBR3-204ENST00000465892 CFHR5Q9BXR6 569 aa11.81□□□□□ -0.52
TGFBR3-204ENST00000465892 DEFB126Q9BYW3 111 aa11.81□□□□□ -0.52
TGFBR3-204ENST00000465892 FGF23Q9GZV9 251 aaPredicted RBP11.81□□□□□ -0.52
TGFBR3-204ENST00000465892 ASCL3Q9NQ33 180 aa11.81□□□□□ -0.52
TGFBR3-204ENST00000465892 TRAV38-1A0A0B4J264 116 aa11.81□□□□□ -0.52
TGFBR3-204ENST00000465892 A0A0J9YW62 118 aa11.81□□□□□ -0.52
TGFBR3-204ENST00000465892 IGHV3-64DA0A0J9YX35 117 aa11.81□□□□□ -0.52
TGFBR3-204ENST00000465892 KIR2DS1A0A191URI9 304 aa11.81□□□□□ -0.52
TGFBR3-204ENST00000465892 CTXND1A0A1B0GTU2 59 aa11.81□□□□□ -0.52
TGFBR3-204ENST00000465892 ZFAND5O76080 213 aa11.81□□□□□ -0.52
TGFBR3-204ENST00000465892 KRASP01116 189 aa11.81□□□□□ -0.52
TGFBR3-204ENST00000465892 KIR2DS4P43632 304 aa11.81□□□□□ -0.52
TGFBR3-204ENST00000465892 CARD18P57730 90 aa11.81□□□□□ -0.52
TGFBR3-204ENST00000465892 KIR2DS1Q14954 304 aa11.81□□□□□ -0.52
TGFBR3-204ENST00000465892 TMEM183BQ1AE95 376 aa11.81□□□□□ -0.52
TGFBR3-204ENST00000465892 BAGE3Q86Y29 109 aa11.81□□□□□ -0.52
TGFBR3-204ENST00000465892 BAGE2Q86Y30 109 aa11.81□□□□□ -0.52
TGFBR3-204ENST00000465892 SPACA9Q96E40 222 aaPredicted RBP11.81□□□□□ -0.52
TGFBR3-204ENST00000465892 OR51B6Q9H340 312 aa11.81□□□□□ -0.52
TGFBR3-204ENST00000465892 LOC102725191A0A1B0GVB3 256 aa11.8□□□□□ -0.52
TGFBR3-204ENST00000465892 SIRPB1O00241 398 aa11.8□□□□□ -0.52
TGFBR3-204ENST00000465892 YPEL1O60688 119 aa11.8□□□□□ -0.52
TGFBR3-204ENST00000465892 WNT2P09544 360 aa11.8□□□□□ -0.52
TGFBR3-204ENST00000465892 TGFBR3Q03167 851 aa11.8□□□□□ -0.52
TGFBR3-204ENST00000465892 TIPARPQ7Z3E1 657 aaKnown RBP11.8□□□□□ -0.52
TGFBR3-204ENST00000465892 YPEL2Q96QA6 119 aa11.8□□□□□ -0.52
TGFBR3-204ENST00000465892 OR6C1Q96RD1 312 aa11.8□□□□□ -0.52
TGFBR3-204ENST00000465892 IL36GQ9NZH8 169 aa11.8□□□□□ -0.52
TGFBR3-204ENST00000465892 MMP17Q9ULZ9 603 aa11.8□□□□□ -0.52
TGFBR3-204ENST00000465892 SLC17A3O00476 420 aa11.8□□□□□ -0.52
TGFBR3-204ENST00000465892 CEACAM16Q2WEN9 425 aa11.8□□□□□ -0.52
TGFBR3-204ENST00000465892 ZNF324BQ6AW86 544 aaPredicted RBP11.8□□□□□ -0.52
TGFBR3-204ENST00000465892 NUFIP2Q7Z417 695 aaKnown RBP11.8□□□□□ -0.52
TGFBR3-204ENST00000465892 PLXDC1Q8IUK5 500 aa11.8□□□□□ -0.52
TGFBR3-204ENST00000465892 STPG4Q8N801 248 aa11.8□□□□□ -0.52
TGFBR3-204ENST00000465892 BTF3L4Q96K17 158 aa11.8□□□□□ -0.52
TGFBR3-204ENST00000465892 ELOVL5Q9NYP7 299 aa11.8□□□□□ -0.52
TGFBR3-204ENST00000465892 SH2D1BO14796 132 aa11.8□□□□□ -0.52
TGFBR3-204ENST00000465892 RNPS1Q15287 305 aaKnown RBP11.8□□□□□ -0.52
TGFBR3-204ENST00000465892 ZNF585BQ52M93 769 aa11.8□□□□□ -0.52
TGFBR3-204ENST00000465892 WNT5BQ9H1J7 359 aa11.8□□□□□ -0.52
TGFBR3-204ENST00000465892 EPOPA6NHQ4 379 aa11.79□□□□□ -0.52
TGFBR3-204ENST00000465892 IGLV2-14P01704 120 aa11.79□□□□□ -0.52
TGFBR3-204ENST00000465892 CCR5P51681 352 aa11.79□□□□□ -0.52
TGFBR3-204ENST00000465892 TPPP2P59282 170 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms