RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 Q8N2B8 174 aa11□□□□□ -0.65
LIMD1-203ENST00000465039 CAPSLQ8WWF8 208 aa11□□□□□ -0.65
LIMD1-203ENST00000465039 BEX1Q9HBH7 125 aa11□□□□□ -0.65
LIMD1-203ENST00000465039 RDH8Q9NYR8 311 aa11□□□□□ -0.65
LIMD1-203ENST00000465039 RSL24D1Q9UHA3 163 aaKnown RBP11□□□□□ -0.65
LIMD1-203ENST00000465039 SAA2-SAA4A0A096LPE2 208 aa10.99□□□□□ -0.65
LIMD1-203ENST00000465039 A0A1W2PPE3 182 aa10.99□□□□□ -0.65
LIMD1-203ENST00000465039 FGF16O43320 207 aa10.99□□□□□ -0.65
LIMD1-203ENST00000465039 SLC22A5O76082 557 aa10.99□□□□□ -0.65
LIMD1-203ENST00000465039 GSTT2P0CG29 244 aa10.99□□□□□ -0.65
LIMD1-203ENST00000465039 GSTT2BP0CG30 244 aa10.99□□□□□ -0.65
LIMD1-203ENST00000465039 SAA2P0DJI9 122 aaPredicted RBP10.99□□□□□ -0.65
LIMD1-203ENST00000465039 ELK1P19419 428 aa10.99□□□□□ -0.65
LIMD1-203ENST00000465039 PRSS3P35030 304 aa10.99□□□□□ -0.65
LIMD1-203ENST00000465039 MRPS10P82664 201 aaKnown RBP10.99□□□□□ -0.65
LIMD1-203ENST00000465039 MSMO1Q15800 293 aa10.99□□□□□ -0.65
LIMD1-203ENST00000465039 H1FOOQ8IZA3 346 aaPredicted RBP10.99□□□□□ -0.65
LIMD1-203ENST00000465039 DRAM1Q8N682 238 aa10.99□□□□□ -0.65
LIMD1-203ENST00000465039 BEST4Q8NFU0 473 aa10.99□□□□□ -0.65
LIMD1-203ENST00000465039 OR56B4Q8NH76 319 aa10.99□□□□□ -0.65
LIMD1-203ENST00000465039 RBM14Q96PK6 669 aaKnown RBP10.99□□□□□ -0.65
LIMD1-203ENST00000465039 GINS4Q9BRT9 223 aa10.99□□□□□ -0.65
LIMD1-203ENST00000465039 ST6GALNAC5Q9BVH7 336 aa10.99□□□□□ -0.65
LIMD1-203ENST00000465039 C11orf54Q9H0W9 315 aaPredicted RBP10.99□□□□□ -0.65
LIMD1-203ENST00000465039 OR1A1Q9P1Q5 309 aa10.99□□□□□ -0.65
LIMD1-203ENST00000465039 ZNF230Q9UIE0 474 aaPredicted RBP10.99□□□□□ -0.65
LIMD1-203ENST00000465039 ELF5Q9UKW6 265 aaPredicted RBP10.99□□□□□ -0.65
LIMD1-203ENST00000465039 CLPSL1A2RUU4 121 aa10.98□□□□□ -0.65
LIMD1-203ENST00000465039 OR5H14A6NHG9 310 aa10.98□□□□□ -0.65
LIMD1-203ENST00000465039 BET1O15155 118 aa10.98□□□□□ -0.65
LIMD1-203ENST00000465039 CHST1O43916 411 aa10.98□□□□□ -0.65
LIMD1-203ENST00000465039 HPGDSO60760 199 aa10.98□□□□□ -0.65
LIMD1-203ENST00000465039 HLA-DQB1P01920 261 aa10.98□□□□□ -0.65
LIMD1-203ENST00000465039 NAT1P18440 290 aa10.98□□□□□ -0.65
LIMD1-203ENST00000465039 MC5RP33032 325 aa10.98□□□□□ -0.65
LIMD1-203ENST00000465039 TAS2R46P59540 309 aa10.98□□□□□ -0.65
LIMD1-203ENST00000465039 RELBQ01201 579 aa10.98□□□□□ -0.65
LIMD1-203ENST00000465039 TAGLNQ01995 201 aaKnown RBP10.98□□□□□ -0.65
LIMD1-203ENST00000465039 LSAMPQ13449 338 aa10.98□□□□□ -0.65
LIMD1-203ENST00000465039 PLA1AQ53H76 456 aa10.98□□□□□ -0.65
LIMD1-203ENST00000465039 AWAT1Q58HT5 328 aa10.98□□□□□ -0.65
LIMD1-203ENST00000465039 IGSF11Q5DX21 431 aa10.98□□□□□ -0.65
LIMD1-203ENST00000465039 OR2T10Q8NGZ9 312 aa10.98□□□□□ -0.65
LIMD1-203ENST00000465039 ZNF251Q9BRH9 671 aa10.98□□□□□ -0.65
LIMD1-203ENST00000465039 SLIRPQ9GZT3 109 aaKnown RBP10.98□□□□□ -0.65
LIMD1-203ENST00000465039 NXF2Q9GZY0 626 aaKnown RBP10.98□□□□□ -0.65
LIMD1-203ENST00000465039 TNFRSF19Q9NS68 423 aa10.98□□□□□ -0.65
LIMD1-203ENST00000465039 ZNF221Q9UK13 617 aa10.98□□□□□ -0.65
LIMD1-203ENST00000465039 MOB4Q9Y3A3 225 aa10.98□□□□□ -0.65
LIMD1-203ENST00000465039 IGKV1D-8A0A087WSZ0 117 aa10.97□□□□□ -0.65
LIMD1-203ENST00000465039 ST8SIA5O15466 376 aa10.97□□□□□ -0.65
LIMD1-203ENST00000465039 TUSC2O75896 110 aa10.97□□□□□ -0.65
LIMD1-203ENST00000465039 MOSP00540 346 aa10.97□□□□□ -0.65
LIMD1-203ENST00000465039 SNRNP70P08621 437 aaKnown RBP10.97□□□□□ -0.65
LIMD1-203ENST00000465039 PAX6P26367 422 aa10.97□□□□□ -0.65
LIMD1-203ENST00000465039 RAB13P51153 203 aa10.97□□□□□ -0.65
LIMD1-203ENST00000465039 ARPC4P59998 168 aa10.97□□□□□ -0.65
LIMD1-203ENST00000465039 DIAPH2-AS1Q14236 149 aa10.97□□□□□ -0.65
LIMD1-203ENST00000465039 LY6EQ16553 131 aa10.97□□□□□ -0.65
LIMD1-203ENST00000465039 FAM53AQ6NSI3 398 aaPredicted RBP10.97□□□□□ -0.65
LIMD1-203ENST00000465039 CCBE1Q6UXH8 406 aaPredicted RBP10.97□□□□□ -0.65
LIMD1-203ENST00000465039 C12orf54Q6X4T0 127 aa10.97□□□□□ -0.65
LIMD1-203ENST00000465039 Q6ZSV7 163 aa10.97□□□□□ -0.65
LIMD1-203ENST00000465039 MOB3BQ86TA1 216 aa10.97□□□□□ -0.65
LIMD1-203ENST00000465039 Q8N6K4 173 aa10.97□□□□□ -0.65
LIMD1-203ENST00000465039 OR5AP2Q8NGF4 316 aa10.97□□□□□ -0.65
LIMD1-203ENST00000465039 OR2T6Q8NHC8 308 aa10.97□□□□□ -0.65
LIMD1-203ENST00000465039 GPX8Q8TED1 209 aa10.97□□□□□ -0.65
LIMD1-203ENST00000465039 SLC25A33Q9BSK2 321 aa10.97□□□□□ -0.65
LIMD1-203ENST00000465039 PRSS22Q9GZN4 317 aa10.97□□□□□ -0.65
LIMD1-203ENST00000465039 IFT46Q9NQC8 304 aa10.97□□□□□ -0.65
LIMD1-203ENST00000465039 NECAP2Q9NVZ3 263 aa10.97□□□□□ -0.65
LIMD1-203ENST00000465039 OR2W1Q9Y3N9 320 aa10.97□□□□□ -0.65
LIMD1-203ENST00000465039 FAM25AB3EWG3 89 aa10.96□□□□□ -0.65
LIMD1-203ENST00000465039 FAM25CB3EWG5 89 aa10.96□□□□□ -0.65
LIMD1-203ENST00000465039 FAM25GB3EWG6 89 aa10.96□□□□□ -0.65
LIMD1-203ENST00000465039 RBBP9O75884 186 aa10.96□□□□□ -0.65
LIMD1-203ENST00000465039 TBPP20226 339 aa10.96□□□□□ -0.65
LIMD1-203ENST00000465039 RCVRNP35243 200 aa10.96□□□□□ -0.65
LIMD1-203ENST00000465039 GPR12P47775 334 aa10.96□□□□□ -0.65
LIMD1-203ENST00000465039 REG1BP48304 166 aa10.96□□□□□ -0.65
LIMD1-203ENST00000465039 ACTBP60709 375 aa10.96□□□□□ -0.65
LIMD1-203ENST00000465039 SSBP1Q04837 148 aaKnown RBP10.96□□□□□ -0.65
LIMD1-203ENST00000465039 OR5AN1Q8NGI8 311 aa10.96□□□□□ -0.65
LIMD1-203ENST00000465039 LINC01006Q8NI28 216 aa10.96□□□□□ -0.65
LIMD1-203ENST00000465039 MAFIPQ8WZ33 124 aa10.96□□□□□ -0.65
LIMD1-203ENST00000465039 BORCS5Q969J3 196 aa10.96□□□□□ -0.65
LIMD1-203ENST00000465039 ADTRPQ96IZ2 230 aa10.96□□□□□ -0.65
LIMD1-203ENST00000465039 RNF5Q99942 180 aa10.96□□□□□ -0.65
LIMD1-203ENST00000465039 NABP2Q9BQ15 211 aa10.96□□□□□ -0.65
LIMD1-203ENST00000465039 PARP12Q9H0J9 701 aaKnown RBP10.96□□□□□ -0.65
LIMD1-203ENST00000465039 EXTL2Q9UBQ6 330 aa10.96□□□□□ -0.65
LIMD1-203ENST00000465039 ZNF107Q9UII5 783 aaPredicted RBP10.96□□□□□ -0.65
LIMD1-203ENST00000465039 DNHD1Q96M86 4753 aa10.96□□□□□ -0.66
LIMD1-203ENST00000465039 CCDC160A6NGH7 325 aa10.95□□□□□ -0.66
LIMD1-203ENST00000465039 RGS5O15539 181 aa10.95□□□□□ -0.66
LIMD1-203ENST00000465039 IGKV1D-33P01593 117 aa10.95□□□□□ -0.66
LIMD1-203ENST00000465039 IGKV1-33P01594 117 aa10.95□□□□□ -0.66
LIMD1-203ENST00000465039 TMEM11P17152 192 aa10.95□□□□□ -0.66
LIMD1-203ENST00000465039 ACTBL2Q562R1 376 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms