RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 LINC01551Q86U37 167 aa6.18□□□□□ -1.42
USP48-206ENST00000464577 ZNF573Q86YE8 665 aa6.18□□□□□ -1.42
USP48-206ENST00000464577 SMRP1Q8NCR6 262 aa6.18□□□□□ -1.42
USP48-206ENST00000464577 DIRC2Q96SL1 478 aa6.18□□□□□ -1.42
USP48-206ENST00000464577 C20orf144Q9BQM9 153 aa6.18□□□□□ -1.42
USP48-206ENST00000464577 CRIM1Q9NZV1 1036 aa6.18□□□□□ -1.42
USP48-206ENST00000464577 HSPB7Q9UBY9 170 aa6.18□□□□□ -1.42
USP48-206ENST00000464577 TRAPPC1Q9Y5R8 145 aa6.18□□□□□ -1.42
USP48-206ENST00000464577 KNL1Q8NG31 2342 aa6.17□□□□□ -1.42
USP48-206ENST00000464577 OR5B21A6NL26 309 aa6.17□□□□□ -1.42
USP48-206ENST00000464577 F6UZH7 168 aa6.17□□□□□ -1.42
USP48-206ENST00000464577 G3V3Y1 287 aa6.17□□□□□ -1.42
USP48-206ENST00000464577 SYNGR1O43759 233 aa6.17□□□□□ -1.42
USP48-206ENST00000464577 CXCL13O43927 109 aa6.17□□□□□ -1.42
USP48-206ENST00000464577 CLDN1O95832 211 aa6.17□□□□□ -1.42
USP48-206ENST00000464577 RPLP1P05386 114 aaKnown RBP6.17□□□□□ -1.42
USP48-206ENST00000464577 P0C879 139 aa6.17□□□□□ -1.42
USP48-206ENST00000464577 ESDP10768 282 aa6.17□□□□□ -1.42
USP48-206ENST00000464577 YPEL3P61236 119 aaPredicted RBP6.17□□□□□ -1.42
USP48-206ENST00000464577 MSMO1Q15800 293 aa6.17□□□□□ -1.42
USP48-206ENST00000464577 FFAR4Q5NUL3 377 aa6.17□□□□□ -1.42
USP48-206ENST00000464577 FAM78BQ5VT40 261 aa6.17□□□□□ -1.42
USP48-206ENST00000464577 ZCCHC14Q8WYQ9 949 aaKnown RBP6.17□□□□□ -1.42
USP48-206ENST00000464577 APOBEC3DQ96AK3 386 aaPredicted RBP6.17□□□□□ -1.42
USP48-206ENST00000464577 MS4A10Q96PG2 267 aa6.17□□□□□ -1.42
USP48-206ENST00000464577 LINC00470Q9BZP3 86 aa6.17□□□□□ -1.42
USP48-206ENST00000464577 PKIBQ9C010 78 aa6.17□□□□□ -1.42
USP48-206ENST00000464577 DLL3Q9NYJ7 618 aa6.17□□□□□ -1.42
USP48-206ENST00000464577 OR1A1Q9P1Q5 309 aa6.17□□□□□ -1.42
USP48-206ENST00000464577 TRAV9-1A0A075B6T8 112 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 IGHV5-10-1A0A0J9YXX1 117 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 PMS2P5A8MQ11 134 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 C11orf94C9JXX5 98 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 DLEU1O43261 78 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 SOX15O60248 233 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 PAGE4O60829 102 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 LILRA1O75019 489 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 SYNGR4O95473 234 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 PDGFBP01127 241 aaPredicted RBP6.16□□□□□ -1.42
USP48-206ENST00000464577 LINC00614P0C842 121 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 ZNF25P17030 456 aaPredicted RBP6.16□□□□□ -1.42
USP48-206ENST00000464577 G0S2P27469 103 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 MLF1P58340 268 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 SELENOTP62341 195 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 RANP62826 216 aaKnown RBP6.16□□□□□ -1.42
USP48-206ENST00000464577 PAFAH1B2P68402 229 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 RAB30Q15771 203 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 CLEC12BQ2HXU8 276 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 OR8G2PQ6IF36 304 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 TEX43Q6ZNM6 134 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 FAM58AQ8N1B3 248 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 ZBTB34Q8NCN2 500 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 OR1K1Q8NGR3 316 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 OR10D3Q8NH80 312 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 GATAD1Q8WUU5 269 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 OR5P3Q8WZ94 311 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 CCDC74BQ96LY2 380 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 PRDM6Q9NQX0 595 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 KCNIP2Q9NS61 270 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 PPP1R3CQ9UQK1 317 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 A0A0U1RQK1 487 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 A0A1W2PQM1 296 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 ZNF320A2RRD8 509 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 C17orf112F2Z3M2 114 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 HS3ST1O14792 307 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 YPEL1O60688 119 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 TNFSF13O75888 250 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 HPRT1P00492 218 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 UMODP07911 640 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 NPPCP23582 126 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 EPHA8P29322 1005 aaPredicted RBP6.16□□□□□ -1.42
USP48-206ENST00000464577 CHRNA7P36544 502 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 OR3A1P47881 315 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 SOX8P57073 446 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 PRSS8Q16651 343 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 Q6P435 159 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 NUFIP2Q7Z417 695 aaKnown RBP6.16□□□□□ -1.42
USP48-206ENST00000464577 YRDCQ86U90 279 aaKnown RBP6.16□□□□□ -1.42
USP48-206ENST00000464577 RPS19BP1Q86WX3 136 aaKnown RBP6.16□□□□□ -1.42
USP48-206ENST00000464577 FGFRL1Q8N441 504 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 ZNF709Q8N972 641 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 OR10P1Q8NGE3 313 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 CMTM2Q8TAZ6 248 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 RDH5Q92781 318 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 RAB1CQ92928 201 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 SGCZQ96LD1 299 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 CIB3Q96Q77 187 aaPredicted RBP6.16□□□□□ -1.42
USP48-206ENST00000464577 YPEL2Q96QA6 119 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 TBX15Q96SF7 602 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 TXNDC17Q9BRA2 123 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 MIEN1Q9BRT3 115 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 TMEM208Q9BTX3 173 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 NPCDR1Q9BY65 106 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 ELOVL5Q9NYP7 299 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 KCNS2Q9ULS6 477 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 GOLT1BQ9Y3E0 138 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 MPC1Q9Y5U8 109 aa6.16□□□□□ -1.42
USP48-206ENST00000464577 IGKV3D-15A0A087WSY6 115 aa6.15□□□□□ -1.42
USP48-206ENST00000464577 HMGB3O15347 200 aaKnown RBP6.15□□□□□ -1.42
USP48-206ENST00000464577 MPLP40238 635 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms