RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 CHCHD6Q9BRQ6 235 aa14.83□□□□□ -0.04
VARS-220ENST00000461874 HDHD3Q9BSH5 251 aaPredicted RBP14.83□□□□□ -0.04
VARS-220ENST00000461874 PIPOXQ9P0Z9 390 aa14.83□□□□□ -0.04
VARS-220ENST00000461874 SLC23A1Q9UHI7 598 aa14.83□□□□□ -0.04
VARS-220ENST00000461874 RAB29O14966 203 aa14.82□□□□□ -0.04
VARS-220ENST00000461874 NBR2O15453 112 aa14.82□□□□□ -0.04
VARS-220ENST00000461874 HLA-DRB1P01911 266 aa14.82□□□□□ -0.04
VARS-220ENST00000461874 PSMB8P28062 276 aa14.82□□□□□ -0.04
VARS-220ENST00000461874 HSPA13P48723 471 aa14.82□□□□□ -0.04
VARS-220ENST00000461874 TMEM50BP56557 158 aa14.82□□□□□ -0.04
VARS-220ENST00000461874 C5orf64Q2M2E5 130 aa14.82□□□□□ -0.04
VARS-220ENST00000461874 IZUMO2Q6UXV1 221 aa14.82□□□□□ -0.04
VARS-220ENST00000461874 NPBQ8NG41 125 aa14.82□□□□□ -0.04
VARS-220ENST00000461874 OR8U1Q8NH10 309 aa14.82□□□□□ -0.04
VARS-220ENST00000461874 FAM3DQ96BQ1 224 aa14.82□□□□□ -0.04
VARS-220ENST00000461874 PARP12Q9H0J9 701 aaKnown RBP14.82□□□□□ -0.04
VARS-220ENST00000461874 ACOT13Q9NPJ3 140 aa14.82□□□□□ -0.04
VARS-220ENST00000461874 ITGB1BP1O14713 200 aa14.81□□□□□ -0.04
VARS-220ENST00000461874 CT45A6P0DMU7 189 aa14.81□□□□□ -0.04
VARS-220ENST00000461874 CT45A5P0DMU8 189 aa14.81□□□□□ -0.04
VARS-220ENST00000461874 CT45A7P0DMV0 189 aa14.81□□□□□ -0.04
VARS-220ENST00000461874 VEGFCP49767 419 aa14.81□□□□□ -0.04
VARS-220ENST00000461874 CLDN12P56749 244 aa14.81□□□□□ -0.04
VARS-220ENST00000461874 DEFB136Q30KP8 78 aa14.81□□□□□ -0.04
VARS-220ENST00000461874 C2orf76Q3KRA6 126 aa14.81□□□□□ -0.04
VARS-220ENST00000461874 RPL39P5Q59GN2 51 aa14.81□□□□□ -0.04
VARS-220ENST00000461874 ARHGAP5-AS1Q96IT6 56 aa14.81□□□□□ -0.04
VARS-220ENST00000461874 AGMATQ9BSE5 352 aa14.81□□□□□ -0.04
VARS-220ENST00000461874 OR51J1Q9H342 316 aa14.81□□□□□ -0.04
VARS-220ENST00000461874 GHITMQ9H3K2 345 aa14.81□□□□□ -0.04
VARS-220ENST00000461874 Q9N2K0 584 aa14.81□□□□□ -0.04
VARS-220ENST00000461874 MGAT4AQ9UM21 535 aa14.81□□□□□ -0.04
VARS-220ENST00000461874 V9GY05 133 aa14.81□□□□□ -0.04
VARS-220ENST00000461874 IGHV7-81A0A0B4J1V7 117 aa14.8□□□□□ -0.04
VARS-220ENST00000461874 LDLRAD4O15165 306 aa14.8□□□□□ -0.04
VARS-220ENST00000461874 NDUFA3O95167 84 aa14.8□□□□□ -0.04
VARS-220ENST00000461874 PPIFP30405 207 aaKnown RBP14.8□□□□□ -0.04
VARS-220ENST00000461874 CEACAM6P40199 344 aa14.8□□□□□ -0.04
VARS-220ENST00000461874 RANBP1P43487 201 aa14.8□□□□□ -0.04
VARS-220ENST00000461874 PSMD7P51665 324 aa14.8□□□□□ -0.04
VARS-220ENST00000461874 RAB25P57735 213 aa14.8□□□□□ -0.04
VARS-220ENST00000461874 HLA-DRB3P79483 266 aa14.8□□□□□ -0.04
VARS-220ENST00000461874 TBCEQ15813 527 aaPredicted RBP14.8□□□□□ -0.04
VARS-220ENST00000461874 LIN54Q6MZP7 749 aa14.8□□□□□ -0.04
VARS-220ENST00000461874 FAM131AQ6UXB0 335 aa14.8□□□□□ -0.04
VARS-220ENST00000461874 ZNF367Q7RTV3 350 aa14.8□□□□□ -0.04
VARS-220ENST00000461874 MYOZ3Q8TDC0 251 aa14.8□□□□□ -0.04
VARS-220ENST00000461874 ABHD14BQ96IU4 210 aa14.8□□□□□ -0.04
VARS-220ENST00000461874 CNBD2Q96M20 576 aa14.8□□□□□ -0.04
VARS-220ENST00000461874 PECRQ9BY49 303 aa14.8□□□□□ -0.04
VARS-220ENST00000461874 C11orf54Q9H0W9 315 aaPredicted RBP14.8□□□□□ -0.04
VARS-220ENST00000461874 C12orf4Q9NQ89 552 aa14.8□□□□□ -0.04
VARS-220ENST00000461874 OR1A1Q9P1Q5 309 aa14.8□□□□□ -0.04
VARS-220ENST00000461874 WSB1Q9Y6I7 421 aa14.8□□□□□ -0.04
VARS-220ENST00000461874 G3V318 75 aa14.79□□□□□ -0.04
VARS-220ENST00000461874 ATP6V0E1O15342 81 aa14.79□□□□□ -0.04
VARS-220ENST00000461874 SCTP09683 121 aa14.79□□□□□ -0.04
VARS-220ENST00000461874 ZBTB25P24278 435 aa14.79□□□□□ -0.04
VARS-220ENST00000461874 SSX1Q16384 188 aa14.79□□□□□ -0.04
VARS-220ENST00000461874 DEFB121Q5J5C9 76 aa14.79□□□□□ -0.04
VARS-220ENST00000461874 PLAC9Q5JTB6 97 aa14.79□□□□□ -0.04
VARS-220ENST00000461874 OR56B1Q8NGI3 324 aa14.79□□□□□ -0.04
VARS-220ENST00000461874 C4orf3Q8WVX3 66 aa14.79□□□□□ -0.04
VARS-220ENST00000461874 EDARADDQ8WWZ3 215 aa14.79□□□□□ -0.04
VARS-220ENST00000461874 CMSS1Q9BQ75 279 aaKnown RBP14.79□□□□□ -0.04
VARS-220ENST00000461874 KLK15Q9H2R5 256 aa14.79□□□□□ -0.04
VARS-220ENST00000461874 PARP11Q9NR21 331 aa14.79□□□□□ -0.04
VARS-220ENST00000461874 KIAA1456Q9P272 454 aa14.79□□□□□ -0.04
VARS-220ENST00000461874 BLOC1S6Q9UL45 172 aa14.79□□□□□ -0.04
VARS-220ENST00000461874 OR5H14A6NHG9 310 aa14.78□□□□□ -0.04
VARS-220ENST00000461874 H0YJW9 148 aa14.78□□□□□ -0.04
VARS-220ENST00000461874 HSPA12AO43301 675 aa14.78□□□□□ -0.04
VARS-220ENST00000461874 DENRO43583 198 aaKnown RBP14.78□□□□□ -0.04
VARS-220ENST00000461874 IGLV1-40P01703 118 aa14.78□□□□□ -0.04
VARS-220ENST00000461874 MC5RP33032 325 aa14.78□□□□□ -0.04
VARS-220ENST00000461874 PLA2G7Q13093 441 aa14.78□□□□□ -0.04
VARS-220ENST00000461874 KIAA0141Q14154 515 aaPredicted RBP14.78□□□□□ -0.04
VARS-220ENST00000461874 HES5Q5TA89 166 aa14.78□□□□□ -0.04
VARS-220ENST00000461874 GLDNQ6ZMI3 551 aaPredicted RBP14.78□□□□□ -0.04
VARS-220ENST00000461874 OR5AN1Q8NGI8 311 aa14.78□□□□□ -0.04
VARS-220ENST00000461874 PTX4Q96A99 478 aa14.78□□□□□ -0.04
VARS-220ENST00000461874 RAB22AQ9UL26 194 aa14.78□□□□□ -0.04
VARS-220ENST00000461874 TRAV1-2A0A0B4J238 106 aa14.77□□□□□ -0.05
VARS-220ENST00000461874 TRAV41A0A0B4J266 112 aa14.77□□□□□ -0.05
VARS-220ENST00000461874 TMEM272A0A1B0GTI8 110 aa14.77□□□□□ -0.05
VARS-220ENST00000461874 FHL3Q13643 280 aa14.77□□□□□ -0.05
VARS-220ENST00000461874 TMEM65Q6PI78 240 aa14.77□□□□□ -0.05
VARS-220ENST00000461874 OR5M8Q8NGP6 311 aa14.77□□□□□ -0.05
VARS-220ENST00000461874 UBE2E2Q96LR5 201 aa14.77□□□□□ -0.05
VARS-220ENST00000461874 ZMAT5Q9UDW3 170 aaKnown RBP14.77□□□□□ -0.05
VARS-220ENST00000461874 WASHC3Q9Y3C0 194 aa14.77□□□□□ -0.05
VARS-220ENST00000461874 IGKV1-6A0A0C4DH72 117 aa14.76□□□□□ -0.05
VARS-220ENST00000461874 SHISA3A0PJX4 238 aa14.76□□□□□ -0.05
VARS-220ENST00000461874 TRDCB7Z8K6 153 aa14.76□□□□□ -0.05
VARS-220ENST00000461874 RRHO14718 337 aa14.76□□□□□ -0.05
VARS-220ENST00000461874 PDCD5O14737 125 aa14.76□□□□□ -0.05
VARS-220ENST00000461874 PROP1O75360 226 aa14.76□□□□□ -0.05
VARS-220ENST00000461874 RBBP9O75884 186 aa14.76□□□□□ -0.05
VARS-220ENST00000461874 ZNF660Q6AZW8 331 aaPredicted RBP14.76□□□□□ -0.05
VARS-220ENST00000461874 CD200R1LQ6Q8B3 271 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms