RNA–Protein interactions for RNA: ENST00000461849.1

RBM39-222, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-222	ENST00000461849	OR1L1	Q8NH94	360 aa		11.13	□□□□□ -0.63
RBM39-222	ENST00000461849	FAM110D	Q8TAY7	271 aa	Predicted RBP	11.13	□□□□□ -0.63
RBM39-222	ENST00000461849	PIFO	Q8TCI5	191 aa		11.13	□□□□□ -0.63
RBM39-222	ENST00000461849	SDCBP	O00560	298 aa	Predicted RBP	11.12	□□□□□ -0.63
RBM39-222	ENST00000461849	CHST1	O43916	411 aa		11.12	□□□□□ -0.63
RBM39-222	ENST00000461849	RBBP9	O75884	186 aa		11.12	□□□□□ -0.63
RBM39-222	ENST00000461849	MMP23A	O75900	390 aa		11.12	□□□□□ -0.63
RBM39-222	ENST00000461849	SCT	P09683	121 aa		11.12	□□□□□ -0.63
RBM39-222	ENST00000461849	VSIG10L2	P0DP72	767 aa		11.12	□□□□□ -0.63
RBM39-222	ENST00000461849	HTR1D	P28221	377 aa		11.12	□□□□□ -0.63
RBM39-222	ENST00000461849	GDNF	P39905	211 aa		11.12	□□□□□ -0.63
RBM39-222	ENST00000461849	ARHGDIB	P52566	201 aa		11.12	□□□□□ -0.63
RBM39-222	ENST00000461849	TAS2R46	P59540	309 aa		11.12	□□□□□ -0.63
RBM39-222	ENST00000461849	PYDC2	Q56P42	97 aa		11.12	□□□□□ -0.63
RBM39-222	ENST00000461849	TMEM219	Q86XT9	240 aa		11.12	□□□□□ -0.63
RBM39-222	ENST00000461849	ABHD12	Q8N2K0	398 aa		11.12	□□□□□ -0.63
RBM39-222	ENST00000461849	KLHDC1	Q8N7A1	406 aa		11.12	□□□□□ -0.63
RBM39-222	ENST00000461849	GVQW1	Q8N7I0	195 aa		11.12	□□□□□ -0.63
RBM39-222	ENST00000461849	C8orf31	Q8N9H6	132 aa		11.12	□□□□□ -0.63
RBM39-222	ENST00000461849	RFESD	Q8TAC1	157 aa		11.12	□□□□□ -0.63
RBM39-222	ENST00000461849	ZNF596	Q8TC21	504 aa		11.12	□□□□□ -0.63
RBM39-222	ENST00000461849	MAFIP	Q8WZ33	124 aa		11.12	□□□□□ -0.63
RBM39-222	ENST00000461849	SNAPC3	Q92966	411 aa		11.12	□□□□□ -0.63
RBM39-222	ENST00000461849	SRR	Q9GZT4	340 aa		11.12	□□□□□ -0.63
RBM39-222	ENST00000461849	TOLLIP	Q9H0E2	274 aa		11.12	□□□□□ -0.63
RBM39-222	ENST00000461849	GFOD1	Q9NXC2	390 aa		11.12	□□□□□ -0.63
RBM39-222	ENST00000461849	TAS2R8	Q9NYW2	309 aa		11.12	□□□□□ -0.63
RBM39-222	ENST00000461849	IGKV1D-8	A0A087WSZ0	117 aa		11.11	□□□□□ -0.63
RBM39-222	ENST00000461849	TRBV6-7	A0A0A0MS04	114 aa		11.11	□□□□□ -0.63
RBM39-222	ENST00000461849	IGKV1-6	A0A0C4DH72	117 aa		11.11	□□□□□ -0.63
RBM39-222	ENST00000461849	MEIS3P1	A6NDR6	274 aa		11.11	□□□□□ -0.63
RBM39-222	ENST00000461849	TOR1A	O14656	332 aa		11.11	□□□□□ -0.63
RBM39-222	ENST00000461849	YPEL1	O60688	119 aa		11.11	□□□□□ -0.63
RBM39-222	ENST00000461849	RGS11	O94810	467 aa		11.11	□□□□□ -0.63
RBM39-222	ENST00000461849	GSTT2	P0CG29	244 aa		11.11	□□□□□ -0.63
RBM39-222	ENST00000461849	GSTT2B	P0CG30	244 aa		11.11	□□□□□ -0.63
RBM39-222	ENST00000461849	TBP	P20226	339 aa		11.11	□□□□□ -0.63
RBM39-222	ENST00000461849	ZBTB25	P24278	435 aa		11.11	□□□□□ -0.63
RBM39-222	ENST00000461849	DYNLT3	P51808	116 aa		11.11	□□□□□ -0.63
RBM39-222	ENST00000461849	ACTBL2	Q562R1	376 aa		11.11	□□□□□ -0.63
RBM39-222	ENST00000461849		Q8N402	240 aa		11.11	□□□□□ -0.63
RBM39-222	ENST00000461849	PRR18	Q8N4B5	295 aa		11.11	□□□□□ -0.63
RBM39-222	ENST00000461849	C11orf44	Q8N8P7	122 aa		11.11	□□□□□ -0.63
RBM39-222	ENST00000461849	OR5AP2	Q8NGF4	316 aa		11.11	□□□□□ -0.63
RBM39-222	ENST00000461849	YPEL2	Q96QA6	119 aa		11.11	□□□□□ -0.63
RBM39-222	ENST00000461849	WDR12	Q9GZL7	423 aa	Known RBP	11.11	□□□□□ -0.63
RBM39-222	ENST00000461849	PRSS22	Q9GZN4	317 aa		11.11	□□□□□ -0.63
RBM39-222	ENST00000461849	OR2S2	Q9NQN1	319 aa		11.11	□□□□□ -0.63
RBM39-222	ENST00000461849	KLK11	Q9UBX7	282 aa		11.11	□□□□□ -0.63
RBM39-222	ENST00000461849	TET2	Q6N021	2002 aa	Predicted RBP	11.11	□□□□□ -0.63
RBM39-222	ENST00000461849		A6NDX4	124 aa		11.1	□□□□□ -0.63
RBM39-222	ENST00000461849	ITGB1BP1	O14713	200 aa		11.1	□□□□□ -0.63
RBM39-222	ENST00000461849	TSPAN15	O95858	294 aa		11.1	□□□□□ -0.63
RBM39-222	ENST00000461849	NFYB	P25208	207 aa		11.1	□□□□□ -0.63
RBM39-222	ENST00000461849	CD40LG	P29965	261 aa		11.1	□□□□□ -0.63
RBM39-222	ENST00000461849	BRS3	P32247	399 aa		11.1	□□□□□ -0.63
RBM39-222	ENST00000461849	ARPC4	P59998	168 aa		11.1	□□□□□ -0.63
RBM39-222	ENST00000461849	LDLRAD2	Q5SZI1	272 aa		11.1	□□□□□ -0.63
RBM39-222	ENST00000461849	CCBE1	Q6UXH8	406 aa	Predicted RBP	11.1	□□□□□ -0.63
RBM39-222	ENST00000461849	LYSMD2	Q8IV50	215 aa		11.1	□□□□□ -0.63
RBM39-222	ENST00000461849	TMEM229B	Q8NBD8	167 aa		11.1	□□□□□ -0.63
RBM39-222	ENST00000461849	OR10J5	Q8NHC4	309 aa		11.1	□□□□□ -0.63
RBM39-222	ENST00000461849	UBALD1	Q8TB05	177 aa		11.1	□□□□□ -0.63
RBM39-222	ENST00000461849	CAPSL	Q8WWF8	208 aa		11.1	□□□□□ -0.63
RBM39-222	ENST00000461849	IL1F10	Q8WWZ1	152 aa		11.1	□□□□□ -0.63
RBM39-222	ENST00000461849	DEDD2	Q8WXF8	326 aa		11.1	□□□□□ -0.63
RBM39-222	ENST00000461849	TRIM63	Q969Q1	353 aa		11.1	□□□□□ -0.63
RBM39-222	ENST00000461849	CREB3L1	Q96BA8	519 aa		11.1	□□□□□ -0.63
RBM39-222	ENST00000461849	THAP7	Q9BT49	309 aa	Predicted RBP	11.1	□□□□□ -0.63
RBM39-222	ENST00000461849	NECAP2	Q9NVZ3	263 aa		11.1	□□□□□ -0.63
RBM39-222	ENST00000461849	DPM3	Q9P2X0	92 aa		11.1	□□□□□ -0.63
RBM39-222	ENST00000461849	GNG12	Q9UBI6	72 aa		11.1	□□□□□ -0.63
RBM39-222	ENST00000461849	FAM172BP	A6NC97	362 aa		11.09	□□□□□ -0.63
RBM39-222	ENST00000461849	LEUTX	A8MZ59	168 aa		11.09	□□□□□ -0.63
RBM39-222	ENST00000461849	ZNF736	B4DX44	427 aa	Predicted RBP	11.09	□□□□□ -0.63
RBM39-222	ENST00000461849	HSPA12A	O43301	675 aa		11.09	□□□□□ -0.63
RBM39-222	ENST00000461849	CD74	P04233	296 aa		11.09	□□□□□ -0.63
RBM39-222	ENST00000461849	CEACAM3	P40198	252 aa		11.09	□□□□□ -0.63
RBM39-222	ENST00000461849	PRRX1	P54821	245 aa		11.09	□□□□□ -0.63
RBM39-222	ENST00000461849	TAS2R19	P59542	299 aa		11.09	□□□□□ -0.63
RBM39-222	ENST00000461849	LSAMP	Q13449	338 aa		11.09	□□□□□ -0.63
RBM39-222	ENST00000461849	ZNF846	Q147U1	533 aa		11.09	□□□□□ -0.63
RBM39-222	ENST00000461849	CDK10	Q15131	360 aa		11.09	□□□□□ -0.63
RBM39-222	ENST00000461849	MORN2	Q502X0	79 aa		11.09	□□□□□ -0.63
RBM39-222	ENST00000461849	PDLIM3	Q53GG5	364 aa	Predicted RBP	11.09	□□□□□ -0.63
RBM39-222	ENST00000461849	IGSF11	Q5DX21	431 aa		11.09	□□□□□ -0.63
RBM39-222	ENST00000461849	RNASE12	Q5GAN4	147 aa	Known RBP	11.09	□□□□□ -0.63
RBM39-222	ENST00000461849	VAX1	Q5SQQ9	334 aa		11.09	□□□□□ -0.63
RBM39-222	ENST00000461849	OVCH2	Q7RTZ1	564 aa		11.09	□□□□□ -0.63
RBM39-222	ENST00000461849	C5orf24	Q7Z6I8	188 aa		11.09	□□□□□ -0.63
RBM39-222	ENST00000461849	LINC00311	Q8N616	119 aa		11.09	□□□□□ -0.63
RBM39-222	ENST00000461849	ZNF439	Q8NDP4	499 aa		11.09	□□□□□ -0.63
RBM39-222	ENST00000461849	OR52L2P	Q8NGH6	319 aa		11.09	□□□□□ -0.63
RBM39-222	ENST00000461849	OR4P4	Q8NGL7	312 aa		11.09	□□□□□ -0.63
RBM39-222	ENST00000461849	OR9G1	Q8NH87	305 aa		11.09	□□□□□ -0.63
RBM39-222	ENST00000461849	AKR1E2	Q96JD6	320 aa		11.09	□□□□□ -0.63
RBM39-222	ENST00000461849	SDHC	Q99643	169 aa	Predicted RBP	11.09	□□□□□ -0.63
RBM39-222	ENST00000461849	CCDC32	Q9BV29	185 aa		11.09	□□□□□ -0.63
RBM39-222	ENST00000461849	ZNF702P	Q9H963	129 aa		11.09	□□□□□ -0.63
RBM39-222	ENST00000461849	SLC23A1	Q9UHI7	598 aa		11.09	□□□□□ -0.63

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