RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 PARP11Q9NR21 331 aa12.13□□□□□ -0.47
NUP50-213ENST00000461437 RNF150Q9ULK6 438 aa12.13□□□□□ -0.47
NUP50-213ENST00000461437 IGHV7-81A0A0B4J1V7 117 aa12.12□□□□□ -0.47
NUP50-213ENST00000461437 TMEM272A0A1B0GTI8 110 aa12.12□□□□□ -0.47
NUP50-213ENST00000461437 CCL24O00175 119 aa12.12□□□□□ -0.47
NUP50-213ENST00000461437 NBR2O15453 112 aa12.12□□□□□ -0.47
NUP50-213ENST00000461437 RRP9O43818 475 aaKnown RBP12.12□□□□□ -0.47
NUP50-213ENST00000461437 CD3GP09693 182 aa12.12□□□□□ -0.47
NUP50-213ENST00000461437 CT45A6P0DMU7 189 aa12.12□□□□□ -0.47
NUP50-213ENST00000461437 CT45A5P0DMU8 189 aa12.12□□□□□ -0.47
NUP50-213ENST00000461437 CT45A7P0DMV0 189 aa12.12□□□□□ -0.47
NUP50-213ENST00000461437 LUMP51884 338 aaPredicted RBP12.12□□□□□ -0.47
NUP50-213ENST00000461437 NDPQ00604 133 aa12.12□□□□□ -0.47
NUP50-213ENST00000461437 C2orf76Q3KRA6 126 aa12.12□□□□□ -0.47
NUP50-213ENST00000461437 MOGAT2Q3SYC2 334 aa12.12□□□□□ -0.47
NUP50-213ENST00000461437 DEFB121Q5J5C9 76 aa12.12□□□□□ -0.47
NUP50-213ENST00000461437 FAM89BQ8N5H3 189 aa12.12□□□□□ -0.47
NUP50-213ENST00000461437 COMMD1Q8N668 190 aa12.12□□□□□ -0.47
NUP50-213ENST00000461437 DRAXINQ8NBI3 349 aaPredicted RBP12.12□□□□□ -0.47
NUP50-213ENST00000461437 OR8H1Q8NGG4 311 aa12.12□□□□□ -0.47
NUP50-213ENST00000461437 CASTOR1Q8WTX7 329 aa12.12□□□□□ -0.47
NUP50-213ENST00000461437 FAM3DQ96BQ1 224 aa12.12□□□□□ -0.47
NUP50-213ENST00000461437 OR5B12Q96R08 314 aa12.12□□□□□ -0.47
NUP50-213ENST00000461437 URM1Q9BTM9 101 aaKnown RBP12.12□□□□□ -0.47
NUP50-213ENST00000461437 KLK15Q9H2R5 256 aa12.12□□□□□ -0.47
NUP50-213ENST00000461437 FBXL15Q9H469 300 aa12.12□□□□□ -0.47
NUP50-213ENST00000461437 STEAP1Q9UHE8 339 aa12.12□□□□□ -0.47
NUP50-213ENST00000461437 FBXO7Q9Y3I1 522 aa12.12□□□□□ -0.47
NUP50-213ENST00000461437 IGKV1-6A0A0C4DH72 117 aa12.11□□□□□ -0.47
NUP50-213ENST00000461437 ARL6IP5O75915 188 aa12.11□□□□□ -0.47
NUP50-213ENST00000461437 CEACAM6P40199 344 aa12.11□□□□□ -0.47
NUP50-213ENST00000461437 FOXE3Q13461 319 aa12.11□□□□□ -0.47
NUP50-213ENST00000461437 TRAM1Q15629 374 aa12.11□□□□□ -0.47
NUP50-213ENST00000461437 MAFIPQ8WZ33 124 aa12.11□□□□□ -0.47
NUP50-213ENST00000461437 CMSS1Q9BQ75 279 aaKnown RBP12.11□□□□□ -0.47
NUP50-213ENST00000461437 C11orf54Q9H0W9 315 aaPredicted RBP12.11□□□□□ -0.47
NUP50-213ENST00000461437 GNB4Q9HAV0 340 aa12.11□□□□□ -0.47
NUP50-213ENST00000461437 Q9N2K0 584 aa12.11□□□□□ -0.47
NUP50-213ENST00000461437 V9GY05 133 aa12.11□□□□□ -0.47
NUP50-213ENST00000461437 A0A075B6Q4 140 aa12.1□□□□□ -0.47
NUP50-213ENST00000461437 TRBV6-6A0A0A6YYG2 114 aa12.1□□□□□ -0.47
NUP50-213ENST00000461437 LDLRAD4O15165 306 aa12.1□□□□□ -0.47
NUP50-213ENST00000461437 PROP1O75360 226 aa12.1□□□□□ -0.47
NUP50-213ENST00000461437 DUS4LO95620 317 aaKnown RBP12.1□□□□□ -0.47
NUP50-213ENST00000461437 IGHG4P01861 327 aa12.1□□□□□ -0.47
NUP50-213ENST00000461437 IGF1P05019 195 aa12.1□□□□□ -0.47
NUP50-213ENST00000461437 ELANEP08246 267 aa12.1□□□□□ -0.47
NUP50-213ENST00000461437 PSMB8P28062 276 aa12.1□□□□□ -0.47
NUP50-213ENST00000461437 EGFEM1PQ0D2K5 195 aa12.1□□□□□ -0.47
NUP50-213ENST00000461437 TBCEQ15813 527 aaPredicted RBP12.1□□□□□ -0.47
NUP50-213ENST00000461437 ECSCRQ19T08 205 aa12.1□□□□□ -0.47
NUP50-213ENST00000461437 C5orf64Q2M2E5 130 aa12.1□□□□□ -0.47
NUP50-213ENST00000461437 LY6G6FQ5SQ64 297 aa12.1□□□□□ -0.47
NUP50-213ENST00000461437 MOB1BQ7L9L4 216 aa12.1□□□□□ -0.47
NUP50-213ENST00000461437 ZNF367Q7RTV3 350 aa12.1□□□□□ -0.47
NUP50-213ENST00000461437 CLCC1Q96S66 551 aa12.1□□□□□ -0.47
NUP50-213ENST00000461437 OR51J1Q9H342 316 aa12.1□□□□□ -0.47
NUP50-213ENST00000461437 ACOT13Q9NPJ3 140 aa12.1□□□□□ -0.47
NUP50-213ENST00000461437 LRRC42Q9Y546 428 aa12.1□□□□□ -0.47
NUP50-213ENST00000461437 A3GALT2U3KPV4 340 aa12.1□□□□□ -0.47
NUP50-213ENST00000461437 H0YJW9 148 aa12.09□□□□□ -0.47
NUP50-213ENST00000461437 FCN1O00602 326 aa12.09□□□□□ -0.47
NUP50-213ENST00000461437 RAB29O14966 203 aa12.09□□□□□ -0.47
NUP50-213ENST00000461437 HSPA12AO43301 675 aa12.09□□□□□ -0.47
NUP50-213ENST00000461437 DENRO43583 198 aaKnown RBP12.09□□□□□ -0.47
NUP50-213ENST00000461437 HLA-DRB1P01911 266 aa12.09□□□□□ -0.47
NUP50-213ENST00000461437 PSMA1P25786 263 aaKnown RBP12.09□□□□□ -0.47
NUP50-213ENST00000461437 PPIFP30405 207 aaKnown RBP12.09□□□□□ -0.47
NUP50-213ENST00000461437 C11orf87Q6NUJ2 197 aa12.09□□□□□ -0.47
NUP50-213ENST00000461437 RNF152Q8N8N0 203 aa12.09□□□□□ -0.47
NUP50-213ENST00000461437 AGMATQ9BSE5 352 aa12.09□□□□□ -0.47
NUP50-213ENST00000461437 FAM103A1Q9BTL3 118 aaKnown RBP12.09□□□□□ -0.47
NUP50-213ENST00000461437 GON7Q9BXV9 100 aa12.09□□□□□ -0.47
NUP50-213ENST00000461437 ALX4Q9H161 411 aaPredicted RBP12.09□□□□□ -0.47
NUP50-213ENST00000461437 VCX3BQ9H321 246 aa12.09□□□□□ -0.47
NUP50-213ENST00000461437 C12orf4Q9NQ89 552 aa12.09□□□□□ -0.47
NUP50-213ENST00000461437 PIPOXQ9P0Z9 390 aa12.09□□□□□ -0.47
NUP50-213ENST00000461437 KIAA1456Q9P272 454 aa12.09□□□□□ -0.47
NUP50-213ENST00000461437 HSF4Q9ULV5 492 aa12.09□□□□□ -0.47
NUP50-213ENST00000461437 GAB2Q9UQC2 676 aa12.09□□□□□ -0.47
NUP50-213ENST00000461437 KCNK7Q9Y2U2 307 aa12.09□□□□□ -0.47
NUP50-213ENST00000461437 TRAV41A0A0B4J266 112 aa12.08□□□□□ -0.48
NUP50-213ENST00000461437 H7C2Y5 167 aa12.08□□□□□ -0.48
NUP50-213ENST00000461437 NDUFA3O95167 84 aa12.08□□□□□ -0.48
NUP50-213ENST00000461437 CDX1P47902 265 aaPredicted RBP12.08□□□□□ -0.48
NUP50-213ENST00000461437 KIAA0141Q14154 515 aaPredicted RBP12.08□□□□□ -0.48
NUP50-213ENST00000461437 KIR2DS1Q14954 304 aa12.08□□□□□ -0.48
NUP50-213ENST00000461437 ASPHD1Q5U4P2 390 aa12.08□□□□□ -0.48
NUP50-213ENST00000461437 C22orf42Q6IC83 251 aa12.08□□□□□ -0.48
NUP50-213ENST00000461437 LIN54Q6MZP7 749 aa12.08□□□□□ -0.48
NUP50-213ENST00000461437 NR2C2APQ86WQ0 139 aa12.08□□□□□ -0.48
NUP50-213ENST00000461437 NPBQ8NG41 125 aa12.08□□□□□ -0.48
NUP50-213ENST00000461437 OR8U1Q8NH10 309 aa12.08□□□□□ -0.48
NUP50-213ENST00000461437 DPF1Q92782 380 aa12.08□□□□□ -0.48
NUP50-213ENST00000461437 ZNF230Q9UIE0 474 aaPredicted RBP12.08□□□□□ -0.48
NUP50-213ENST00000461437 ELF5Q9UKW6 265 aaPredicted RBP12.08□□□□□ -0.48
NUP50-213ENST00000461437 SOX15O60248 233 aa12.07□□□□□ -0.48
NUP50-213ENST00000461437 ATP6V1G2O95670 118 aa12.07□□□□□ -0.48
NUP50-213ENST00000461437 GNB3P16520 340 aa12.07□□□□□ -0.48
NUP50-213ENST00000461437 ZBTB25P24278 435 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms