RNA–Protein interactions for RNA: ENST00000461132.1

SPTLC1-203, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 808 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-203ENST00000461132 FAM172AQ8WUF8 416 aa2.31□□□□□ -2.04
SPTLC1-203ENST00000461132 KLF6Q99612 283 aaPredicted RBP2.31□□□□□ -2.04
SPTLC1-203ENST00000461132 SIGMAR1Q99720 223 aa2.31□□□□□ -2.04
SPTLC1-203ENST00000461132 PRRT1Q99946 306 aa2.31□□□□□ -2.04
SPTLC1-203ENST00000461132 VCXQ9H320 206 aa2.31□□□□□ -2.04
SPTLC1-203ENST00000461132 C11orf49Q9H6J7 331 aa2.31□□□□□ -2.04
SPTLC1-203ENST00000461132 WASHC3Q9Y3C0 194 aa2.31□□□□□ -2.04
SPTLC1-203ENST00000461132 TRAPPC1Q9Y5R8 145 aa2.31□□□□□ -2.04
SPTLC1-203ENST00000461132 ATRNO75882 1429 aa2.31□□□□□ -2.04
SPTLC1-203ENST00000461132 ZFYVE9O95405 1425 aa2.31□□□□□ -2.04
SPTLC1-203ENST00000461132 LTBP1Q14766 1721 aa2.31□□□□□ -2.04
SPTLC1-203ENST00000461132 IGHV3-43A0A0B4J1X8 118 aa2.3□□□□□ -2.04
SPTLC1-203ENST00000461132 PQLC2LA1A4F0 135 aa2.3□□□□□ -2.04
SPTLC1-203ENST00000461132 OR5H14A6NHG9 310 aa2.3□□□□□ -2.04
SPTLC1-203ENST00000461132 EEF1E1-BLOC1S5C9J1V9 151 aa2.3□□□□□ -2.04
SPTLC1-203ENST00000461132 PGRMC1O00264 195 aaKnown RBP2.3□□□□□ -2.04
SPTLC1-203ENST00000461132 MRASO14807 208 aa2.3□□□□□ -2.04
SPTLC1-203ENST00000461132 EEF1E1O43324 174 aaKnown RBP2.3□□□□□ -2.04
SPTLC1-203ENST00000461132 ZNF207O43670 478 aaKnown RBP2.3□□□□□ -2.04
SPTLC1-203ENST00000461132 CHP2O43745 196 aa2.3□□□□□ -2.04
SPTLC1-203ENST00000461132 CCNKO75909 580 aa2.3□□□□□ -2.04
SPTLC1-203ENST00000461132 HAND1O96004 215 aa2.3□□□□□ -2.04
SPTLC1-203ENST00000461132 LTAP01374 205 aa2.3□□□□□ -2.04
SPTLC1-203ENST00000461132 IGKV3-11P04433 115 aa2.3□□□□□ -2.04
SPTLC1-203ENST00000461132 ZNF708P17019 499 aa2.3□□□□□ -2.04
SPTLC1-203ENST00000461132 ATP6V0CP27449 155 aa2.3□□□□□ -2.04
SPTLC1-203ENST00000461132 OR10J1P30954 320 aa2.3□□□□□ -2.04
SPTLC1-203ENST00000461132 PPP1CCP36873 323 aaKnown RBP2.3□□□□□ -2.04
SPTLC1-203ENST00000461132 CTBP2P56545 445 aa2.3□□□□□ -2.04
SPTLC1-203ENST00000461132 TMEM33P57088 247 aa2.3□□□□□ -2.04
SPTLC1-203ENST00000461132 CAV1Q03135 178 aa2.3□□□□□ -2.04
SPTLC1-203ENST00000461132 KRR1Q13601 381 aaKnown RBP2.3□□□□□ -2.04
SPTLC1-203ENST00000461132 ENDOGQ14249 297 aaKnown RBP2.3□□□□□ -2.04
SPTLC1-203ENST00000461132 CDK10Q15131 360 aa2.3□□□□□ -2.04
SPTLC1-203ENST00000461132 SLC9A3R2Q15599 337 aa2.3□□□□□ -2.04
SPTLC1-203ENST00000461132 ACOT6Q3I5F7 207 aaPredicted RBP2.3□□□□□ -2.04
SPTLC1-203ENST00000461132 ZCWPW2Q504Y3 356 aa2.3□□□□□ -2.04
SPTLC1-203ENST00000461132 FAM71E1Q6IPT2 247 aa2.3□□□□□ -2.04
SPTLC1-203ENST00000461132 TMEM144Q7Z5S9 345 aa2.3□□□□□ -2.04
SPTLC1-203ENST00000461132 SAXO1Q8IYX7 474 aa2.3□□□□□ -2.04
SPTLC1-203ENST00000461132 ZNF433Q8N7K0 673 aaPredicted RBP2.3□□□□□ -2.04
SPTLC1-203ENST00000461132 UBALD1Q8TB05 177 aa2.3□□□□□ -2.04
SPTLC1-203ENST00000461132 KCTD4Q8WVF5 259 aa2.3□□□□□ -2.04
SPTLC1-203ENST00000461132 ITLN2Q8WWU7 325 aaPredicted RBP2.3□□□□□ -2.04
SPTLC1-203ENST00000461132 RTN4IP1Q8WWV3 396 aaPredicted RBP2.3□□□□□ -2.04
SPTLC1-203ENST00000461132 PYURFQ96I23 114 aa2.3□□□□□ -2.04
SPTLC1-203ENST00000461132 ZNF285Q96NJ3 590 aa2.3□□□□□ -2.04
SPTLC1-203ENST00000461132 OR2V2Q96R30 315 aa2.3□□□□□ -2.04
SPTLC1-203ENST00000461132 RNF5Q99942 180 aa2.3□□□□□ -2.04
SPTLC1-203ENST00000461132 DCSTAMPQ9H295 470 aa2.3□□□□□ -2.04
SPTLC1-203ENST00000461132 ZNF430Q9H8G1 570 aaPredicted RBP2.3□□□□□ -2.04
SPTLC1-203ENST00000461132 MRPL40Q9NQ50 206 aaKnown RBP2.3□□□□□ -2.04
SPTLC1-203ENST00000461132 GID8Q9NWU2 228 aa2.3□□□□□ -2.04
SPTLC1-203ENST00000461132 ZNF391Q9UJN7 358 aa2.3□□□□□ -2.04
SPTLC1-203ENST00000461132 ANGPT4Q9Y264 503 aa2.3□□□□□ -2.04
SPTLC1-203ENST00000461132 PRELID3BQ9Y3B1 194 aa2.3□□□□□ -2.04
SPTLC1-203ENST00000461132 TSPOAP1O95153 1857 aa2.3□□□□□ -2.04
SPTLC1-203ENST00000461132 NCOA1Q15788 1441 aa2.29□□□□□ -2.04
SPTLC1-203ENST00000461132 IGLV3-16A0A075B6K0 115 aa2.29□□□□□ -2.04
SPTLC1-203ENST00000461132 IGHV3OR15-7A0A075B7D8 119 aa2.29□□□□□ -2.04
SPTLC1-203ENST00000461132 C7orf66A4D0T2 115 aa2.29□□□□□ -2.04
SPTLC1-203ENST00000461132 ZNF850A8MQ14 1090 aa2.29□□□□□ -2.04
SPTLC1-203ENST00000461132 IGLL5B9A064 214 aa2.29□□□□□ -2.04
SPTLC1-203ENST00000461132 TMEM238C9JI98 176 aa2.29□□□□□ -2.04
SPTLC1-203ENST00000461132 GSTZ1O43708 216 aaPredicted RBP2.29□□□□□ -2.04
SPTLC1-203ENST00000461132 OR7C1O76099 320 aaPredicted RBP2.29□□□□□ -2.04
SPTLC1-203ENST00000461132 HLA-DQB2P05538 268 aa2.29□□□□□ -2.04
SPTLC1-203ENST00000461132 CST2P09228 141 aa2.29□□□□□ -2.04
SPTLC1-203ENST00000461132 LINC00869P0C866 280 aa2.29□□□□□ -2.04
SPTLC1-203ENST00000461132 NTF3P20783 257 aa2.29□□□□□ -2.04
SPTLC1-203ENST00000461132 MDKP21741 143 aaPredicted RBP2.29□□□□□ -2.04
SPTLC1-203ENST00000461132 ELF3P78545 371 aaPredicted RBP2.29□□□□□ -2.04
SPTLC1-203ENST00000461132 HOXC5Q00444 222 aa2.29□□□□□ -2.04
SPTLC1-203ENST00000461132 SP6Q3SY56 376 aa2.29□□□□□ -2.04
SPTLC1-203ENST00000461132 TRIQKQ629K1 86 aa2.29□□□□□ -2.04
SPTLC1-203ENST00000461132 SBSNQ6UWP8 590 aa2.29□□□□□ -2.04
SPTLC1-203ENST00000461132 SLC36A1Q7Z2H8 476 aa2.29□□□□□ -2.04
SPTLC1-203ENST00000461132 ZNF550Q7Z398 422 aa2.29□□□□□ -2.04
SPTLC1-203ENST00000461132 SMIM15Q7Z3B0 74 aa2.29□□□□□ -2.04
SPTLC1-203ENST00000461132 DAZ4Q86SG3 579 aaKnown RBP2.29□□□□□ -2.04
SPTLC1-203ENST00000461132 MARCH3Q86UD3 253 aa2.29□□□□□ -2.04
SPTLC1-203ENST00000461132 AKAP14Q86UN6 197 aa2.29□□□□□ -2.04
SPTLC1-203ENST00000461132 KRTCAP2Q8N6L1 136 aa2.29□□□□□ -2.04
SPTLC1-203ENST00000461132 OR10X1Q8NGY0 326 aa2.29□□□□□ -2.04
SPTLC1-203ENST00000461132 OR4A5Q8NH83 315 aa2.29□□□□□ -2.04
SPTLC1-203ENST00000461132 RBPMSQ93062 196 aaKnown RBP2.29□□□□□ -2.04
SPTLC1-203ENST00000461132 C12orf43Q96C57 262 aaKnown RBP2.29□□□□□ -2.04
SPTLC1-203ENST00000461132 SLC25A44Q96H78 314 aaPredicted RBP2.29□□□□□ -2.04
SPTLC1-203ENST00000461132 IP6K3Q96PC2 410 aa2.29□□□□□ -2.04
SPTLC1-203ENST00000461132 OR52B2Q96RD2 323 aa2.29□□□□□ -2.04
SPTLC1-203ENST00000461132 SHANK2-AS3Q9BTD1 123 aa2.29□□□□□ -2.04
SPTLC1-203ENST00000461132 GABARAPL1Q9H0R8 117 aa2.29□□□□□ -2.04
SPTLC1-203ENST00000461132 FAM60AQ9NP50 221 aa2.29□□□□□ -2.04
SPTLC1-203ENST00000461132 DAZ1Q9NQZ3 744 aaKnown RBP2.29□□□□□ -2.04
SPTLC1-203ENST00000461132 ZNF492Q9P255 531 aa2.29□□□□□ -2.04
SPTLC1-203ENST00000461132 FAM32AQ9Y421 112 aaKnown RBP2.29□□□□□ -2.04
SPTLC1-203ENST00000461132 RFNGQ9Y644 331 aa2.29□□□□□ -2.04
SPTLC1-203ENST00000461132 ARHGAP21Q5T5U3 1957 aa2.29□□□□□ -2.04
SPTLC1-203ENST00000461132 BAZ2AQ9UIF9 1905 aaKnown RBP2.29□□□□□ -2.04
SPTLC1-203ENST00000461132 EIF3AQ14152 1382 aaKnown RBP2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms