RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 CTXN2P0C2S0 81 aa10.6□□□□□ -0.71
RAB11FIP3-207ENST00000461009 HES1Q14469 280 aa10.6□□□□□ -0.71
RAB11FIP3-207ENST00000461009 CCBE1Q6UXH8 406 aaPredicted RBP10.6□□□□□ -0.71
RAB11FIP3-207ENST00000461009 TMEM219Q86XT9 240 aa10.6□□□□□ -0.71
RAB11FIP3-207ENST00000461009 TGIF2LXQ8IUE1 241 aa10.6□□□□□ -0.71
RAB11FIP3-207ENST00000461009 RTN4IP1Q8WWV3 396 aaPredicted RBP10.6□□□□□ -0.71
RAB11FIP3-207ENST00000461009 ST6GALNAC5Q9BVH7 336 aa10.6□□□□□ -0.71
RAB11FIP3-207ENST00000461009 ZNF230Q9UIE0 474 aaPredicted RBP10.6□□□□□ -0.71
RAB11FIP3-207ENST00000461009 PKD1L1Q8TDX9 2849 aa10.6□□□□□ -0.71
RAB11FIP3-207ENST00000461009 TET2Q6N021 2002 aaPredicted RBP10.59□□□□□ -0.71
RAB11FIP3-207ENST00000461009 A0A1W2PPI3 338 aa10.59□□□□□ -0.71
RAB11FIP3-207ENST00000461009 FAM90A9PA6NNJ1 464 aa10.59□□□□□ -0.71
RAB11FIP3-207ENST00000461009 BET1O15155 118 aa10.59□□□□□ -0.71
RAB11FIP3-207ENST00000461009 CHST1O43916 411 aa10.59□□□□□ -0.71
RAB11FIP3-207ENST00000461009 OR2F2O95006 317 aa10.59□□□□□ -0.71
RAB11FIP3-207ENST00000461009 TSPAN15O95858 294 aa10.59□□□□□ -0.71
RAB11FIP3-207ENST00000461009 APOA1P02647 267 aa10.59□□□□□ -0.71
RAB11FIP3-207ENST00000461009 SNRNP70P08621 437 aaKnown RBP10.59□□□□□ -0.71
RAB11FIP3-207ENST00000461009 GSTT2P0CG29 244 aa10.59□□□□□ -0.71
RAB11FIP3-207ENST00000461009 GSTT2BP0CG30 244 aa10.59□□□□□ -0.71
RAB11FIP3-207ENST00000461009 CD24P25063 80 aa10.59□□□□□ -0.71
RAB11FIP3-207ENST00000461009 CD1BP29016 333 aa10.59□□□□□ -0.71
RAB11FIP3-207ENST00000461009 CBX5P45973 191 aa10.59□□□□□ -0.71
RAB11FIP3-207ENST00000461009 REG1BP48304 166 aa10.59□□□□□ -0.71
RAB11FIP3-207ENST00000461009 DIAPH2-AS1Q14236 149 aa10.59□□□□□ -0.71
RAB11FIP3-207ENST00000461009 TMEM69Q5SWH9 247 aa10.59□□□□□ -0.71
RAB11FIP3-207ENST00000461009 IZUMO1Q8IYV9 350 aa10.59□□□□□ -0.71
RAB11FIP3-207ENST00000461009 OR56B4Q8NH76 319 aa10.59□□□□□ -0.71
RAB11FIP3-207ENST00000461009 RBM14Q96PK6 669 aaKnown RBP10.59□□□□□ -0.71
RAB11FIP3-207ENST00000461009 S1PR3Q99500 378 aa10.59□□□□□ -0.71
RAB11FIP3-207ENST00000461009 GINS4Q9BRT9 223 aa10.59□□□□□ -0.71
RAB11FIP3-207ENST00000461009 SLC25A33Q9BSK2 321 aa10.59□□□□□ -0.71
RAB11FIP3-207ENST00000461009 AUNIPQ9H7T9 357 aa10.59□□□□□ -0.71
RAB11FIP3-207ENST00000461009 OR1A1Q9P1Q5 309 aa10.59□□□□□ -0.71
RAB11FIP3-207ENST00000461009 ZNF221Q9UK13 617 aa10.59□□□□□ -0.71
RAB11FIP3-207ENST00000461009 ELF5Q9UKW6 265 aaPredicted RBP10.59□□□□□ -0.71
RAB11FIP3-207ENST00000461009 TRRAPQ9Y4A5 3859 aa10.59□□□□□ -0.71
RAB11FIP3-207ENST00000461009 M0QZK8 103 aa10.58□□□□□ -0.72
RAB11FIP3-207ENST00000461009 FBXO24O75426 580 aa10.58□□□□□ -0.72
RAB11FIP3-207ENST00000461009 TMEM11P17152 192 aa10.58□□□□□ -0.72
RAB11FIP3-207ENST00000461009 FAM71F2Q6NXP2 309 aa10.58□□□□□ -0.72
RAB11FIP3-207ENST00000461009 Q8N2B8 174 aa10.58□□□□□ -0.72
RAB11FIP3-207ENST00000461009 C11orf44Q8N8P7 122 aa10.58□□□□□ -0.72
RAB11FIP3-207ENST00000461009 OR2T10Q8NGZ9 312 aa10.58□□□□□ -0.72
RAB11FIP3-207ENST00000461009 NUDCD2Q8WVJ2 157 aa10.58□□□□□ -0.72
RAB11FIP3-207ENST00000461009 MAFIPQ8WZ33 124 aa10.58□□□□□ -0.72
RAB11FIP3-207ENST00000461009 CFHR4Q92496 578 aa10.58□□□□□ -0.72
RAB11FIP3-207ENST00000461009 CABLES2Q9BTV7 478 aa10.58□□□□□ -0.72
RAB11FIP3-207ENST00000461009 TOLLIPQ9H0E2 274 aa10.58□□□□□ -0.72
RAB11FIP3-207ENST00000461009 C11orf54Q9H0W9 315 aaPredicted RBP10.58□□□□□ -0.72
RAB11FIP3-207ENST00000461009 RDH8Q9NYR8 311 aa10.58□□□□□ -0.72
RAB11FIP3-207ENST00000461009 RBM7Q9Y580 266 aaKnown RBP10.58□□□□□ -0.72
RAB11FIP3-207ENST00000461009 TRBV6-7A0A0A0MS04 114 aa10.57□□□□□ -0.72
RAB11FIP3-207ENST00000461009 IGKV1-6A0A0C4DH72 117 aa10.57□□□□□ -0.72
RAB11FIP3-207ENST00000461009 FAM25AB3EWG3 89 aa10.57□□□□□ -0.72
RAB11FIP3-207ENST00000461009 FAM25CB3EWG5 89 aa10.57□□□□□ -0.72
RAB11FIP3-207ENST00000461009 FAM25GB3EWG6 89 aa10.57□□□□□ -0.72
RAB11FIP3-207ENST00000461009 ST8SIA5O15466 376 aa10.57□□□□□ -0.72
RAB11FIP3-207ENST00000461009 MOSP00540 346 aa10.57□□□□□ -0.72
RAB11FIP3-207ENST00000461009 IGKV1D-33P01593 117 aa10.57□□□□□ -0.72
RAB11FIP3-207ENST00000461009 IGKV1-33P01594 117 aa10.57□□□□□ -0.72
RAB11FIP3-207ENST00000461009 VDAC2P45880 294 aaPredicted RBP10.57□□□□□ -0.72
RAB11FIP3-207ENST00000461009 HABP2Q14520 560 aaPredicted RBP10.57□□□□□ -0.72
RAB11FIP3-207ENST00000461009 IGSF11Q5DX21 431 aa10.57□□□□□ -0.72
RAB11FIP3-207ENST00000461009 CNIH2Q6PI25 160 aa10.57□□□□□ -0.72
RAB11FIP3-207ENST00000461009 ODF3L1Q8IXM7 274 aa10.57□□□□□ -0.72
RAB11FIP3-207ENST00000461009 ZNF702PQ9H963 129 aa10.57□□□□□ -0.72
RAB11FIP3-207ENST00000461009 SAA2-SAA4A0A096LPE2 208 aa10.56□□□□□ -0.72
RAB11FIP3-207ENST00000461009 SSX5O60225 188 aa10.56□□□□□ -0.72
RAB11FIP3-207ENST00000461009 OPN1MWP04001 364 aa10.56□□□□□ -0.72
RAB11FIP3-207ENST00000461009 SAA2P0DJI9 122 aaPredicted RBP10.56□□□□□ -0.72
RAB11FIP3-207ENST00000461009 OPN1MW2P0DN77 364 aa10.56□□□□□ -0.72
RAB11FIP3-207ENST00000461009 OPN1MW3P0DN78 364 aa10.56□□□□□ -0.72
RAB11FIP3-207ENST00000461009 PRSS3P35030 304 aa10.56□□□□□ -0.72
RAB11FIP3-207ENST00000461009 GPR12P47775 334 aa10.56□□□□□ -0.72
RAB11FIP3-207ENST00000461009 TAS2R20P59543 309 aa10.56□□□□□ -0.72
RAB11FIP3-207ENST00000461009 ARPC4P59998 168 aa10.56□□□□□ -0.72
RAB11FIP3-207ENST00000461009 EBI3Q14213 229 aa10.56□□□□□ -0.72
RAB11FIP3-207ENST00000461009 HNF4GQ14541 408 aa10.56□□□□□ -0.72
RAB11FIP3-207ENST00000461009 ZNF833PQ6ZTB9 187 aa10.56□□□□□ -0.72
RAB11FIP3-207ENST00000461009 HOGA1Q86XE5 327 aa10.56□□□□□ -0.72
RAB11FIP3-207ENST00000461009 BEST4Q8NFU0 473 aa10.56□□□□□ -0.72
RAB11FIP3-207ENST00000461009 OR4F17Q8NGA8 305 aa10.56□□□□□ -0.72
RAB11FIP3-207ENST00000461009 EAF1Q96JC9 268 aaPredicted RBP10.56□□□□□ -0.72
RAB11FIP3-207ENST00000461009 OR4F4Q96R69 305 aa10.56□□□□□ -0.72
RAB11FIP3-207ENST00000461009 AGMATQ9BSE5 352 aa10.56□□□□□ -0.72
RAB11FIP3-207ENST00000461009 IFI27L2Q9H2X8 130 aa10.56□□□□□ -0.72
RAB11FIP3-207ENST00000461009 IFT46Q9NQC8 304 aa10.56□□□□□ -0.72
RAB11FIP3-207ENST00000461009 ANXA10Q9UJ72 324 aa10.56□□□□□ -0.72
RAB11FIP3-207ENST00000461009 RNF150Q9ULK6 438 aa10.56□□□□□ -0.72
RAB11FIP3-207ENST00000461009 MRPS7Q9Y2R9 242 aaKnown RBP10.56□□□□□ -0.72
RAB11FIP3-207ENST00000461009 MOB4Q9Y3A3 225 aa10.56□□□□□ -0.72
RAB11FIP3-207ENST00000461009 IGHV3-72A0A0B4J1Y9 119 aa10.55□□□□□ -0.72
RAB11FIP3-207ENST00000461009 CCDC160A6NGH7 325 aa10.55□□□□□ -0.72
RAB11FIP3-207ENST00000461009 HPGDSO60760 199 aa10.55□□□□□ -0.72
RAB11FIP3-207ENST00000461009 EIF4EP06730 217 aaKnown RBP10.55□□□□□ -0.72
RAB11FIP3-207ENST00000461009 MC5RP33032 325 aa10.55□□□□□ -0.72
RAB11FIP3-207ENST00000461009 OR3A3P47888 321 aa10.55□□□□□ -0.72
RAB11FIP3-207ENST00000461009 BLCAPP62952 87 aa10.55□□□□□ -0.72
RAB11FIP3-207ENST00000461009 SPCS2Q15005 226 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms