RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 LSAMPQ13449 338 aa18.1■□□□□ 0.49
C9orf3-209ENST00000460573 C16orf87Q6PH81 154 aa18.1■□□□□ 0.49
C9orf3-209ENST00000460573 C11orf54Q9H0W9 315 aaPredicted RBP18.1■□□□□ 0.49
C9orf3-209ENST00000460573 VPREB3Q9UKI3 123 aa18.1■□□□□ 0.49
C9orf3-209ENST00000460573 RAB29O14966 203 aa18.09■□□□□ 0.49
C9orf3-209ENST00000460573 LANCL1O43813 399 aa18.09■□□□□ 0.49
C9orf3-209ENST00000460573 NAT1P18440 290 aa18.09■□□□□ 0.49
C9orf3-209ENST00000460573 PAX6P26367 422 aa18.09■□□□□ 0.49
C9orf3-209ENST00000460573 TNFSF8P32971 234 aa18.09■□□□□ 0.49
C9orf3-209ENST00000460573 RPL15P61313 204 aaKnown RBP18.09■□□□□ 0.49
C9orf3-209ENST00000460573 MRPS10P82664 201 aaKnown RBP18.09■□□□□ 0.49
C9orf3-209ENST00000460573 FAM71F2Q6NXP2 309 aa18.09■□□□□ 0.49
C9orf3-209ENST00000460573 LIAT1Q6ZQX7 453 aa18.09■□□□□ 0.49
C9orf3-209ENST00000460573 PIFOQ8TCI5 191 aa18.09■□□□□ 0.49
C9orf3-209ENST00000460573 DUX5Q96PT3 197 aa18.09■□□□□ 0.49
C9orf3-209ENST00000460573 AGMATQ9BSE5 352 aa18.09■□□□□ 0.49
C9orf3-209ENST00000460573 IFI27L2Q9H2X8 130 aa18.09■□□□□ 0.49
C9orf3-209ENST00000460573 PITPNC1Q9UKF7 332 aa18.09■□□□□ 0.49
C9orf3-209ENST00000460573 MEIS3P1A6NDR6 274 aa18.08■□□□□ 0.48
C9orf3-209ENST00000460573 PLA1AQ53H76 456 aa18.08■□□□□ 0.48
C9orf3-209ENST00000460573 PYHIN1Q6K0P9 492 aa18.08■□□□□ 0.48
C9orf3-209ENST00000460573 ODF3L1Q8IXM7 274 aa18.08■□□□□ 0.48
C9orf3-209ENST00000460573 H1FOOQ8IZA3 346 aaPredicted RBP18.08■□□□□ 0.48
C9orf3-209ENST00000460573 OR5AP2Q8NGF4 316 aa18.08■□□□□ 0.48
C9orf3-209ENST00000460573 RTN4IP1Q8WWV3 396 aaPredicted RBP18.08■□□□□ 0.48
C9orf3-209ENST00000460573 ABHD1Q96SE0 405 aa18.08■□□□□ 0.48
C9orf3-209ENST00000460573 S1PR3Q99500 378 aa18.08■□□□□ 0.48
C9orf3-209ENST00000460573 CHIAQ9BZP6 476 aa18.08■□□□□ 0.48
C9orf3-209ENST00000460573 TNFRSF19Q9NS68 423 aa18.08■□□□□ 0.48
C9orf3-209ENST00000460573 NECAP2Q9NVZ3 263 aa18.08■□□□□ 0.48
C9orf3-209ENST00000460573 IGHV1-3A0A0C4DH29 117 aa18.07■□□□□ 0.48
C9orf3-209ENST00000460573 A0A1W2PPI3 338 aa18.07■□□□□ 0.48
C9orf3-209ENST00000460573 ST8SIA5O15466 376 aa18.07■□□□□ 0.48
C9orf3-209ENST00000460573 DIAPH2-AS1Q14236 149 aa18.07■□□□□ 0.48
C9orf3-209ENST00000460573 THNSL2Q86YJ6 484 aa18.07■□□□□ 0.48
C9orf3-209ENST00000460573 TGIF2LXQ8IUE1 241 aa18.07■□□□□ 0.48
C9orf3-209ENST00000460573 SNAPC3Q92966 411 aa18.07■□□□□ 0.48
C9orf3-209ENST00000460573 PARP12Q9H0J9 701 aaKnown RBP18.07■□□□□ 0.48
C9orf3-209ENST00000460573 RAB18Q9NP72 206 aa18.07■□□□□ 0.48
C9orf3-209ENST00000460573 ZNF221Q9UK13 617 aa18.07■□□□□ 0.48
C9orf3-209ENST00000460573 TMEM89A2RUT3 159 aa18.06■□□□□ 0.48
C9orf3-209ENST00000460573 CTDSPLO15194 276 aa18.06■□□□□ 0.48
C9orf3-209ENST00000460573 RCVRNP35243 200 aa18.06■□□□□ 0.48
C9orf3-209ENST00000460573 RAB13P51153 203 aa18.06■□□□□ 0.48
C9orf3-209ENST00000460573 TAS2R46P59540 309 aa18.06■□□□□ 0.48
C9orf3-209ENST00000460573 IL18Q14116 193 aa18.06■□□□□ 0.48
C9orf3-209ENST00000460573 HABP2Q14520 560 aaPredicted RBP18.06■□□□□ 0.48
C9orf3-209ENST00000460573 ZNF833PQ6ZTB9 187 aa18.06■□□□□ 0.48
C9orf3-209ENST00000460573 FCAMRQ8WWV6 532 aa18.06■□□□□ 0.48
C9orf3-209ENST00000460573 GAB2Q9UQC2 676 aa18.06■□□□□ 0.48
C9orf3-209ENST00000460573 TCF19Q9Y242 345 aa18.06■□□□□ 0.48
C9orf3-209ENST00000460573 SAA2-SAA4A0A096LPE2 208 aa18.05■□□□□ 0.48
C9orf3-209ENST00000460573 FABP12A6NFH5 140 aa18.05■□□□□ 0.48
C9orf3-209ENST00000460573 FAM90A9PA6NNJ1 464 aa18.05■□□□□ 0.48
C9orf3-209ENST00000460573 TIMM23O14925 209 aa18.05■□□□□ 0.48
C9orf3-209ENST00000460573 RBBP9O75884 186 aa18.05■□□□□ 0.48
C9orf3-209ENST00000460573 SAA2P0DJI9 122 aaPredicted RBP18.05■□□□□ 0.48
C9orf3-209ENST00000460573 ACTBP60709 375 aa18.05■□□□□ 0.48
C9orf3-209ENST00000460573 SSBP1Q04837 148 aaKnown RBP18.05■□□□□ 0.48
C9orf3-209ENST00000460573 CDK10Q15131 360 aa18.05■□□□□ 0.48
C9orf3-209ENST00000460573 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.05■□□□□ 0.48
C9orf3-209ENST00000460573 CFHR4Q92496 578 aa18.05■□□□□ 0.48
C9orf3-209ENST00000460573 SOSTQ9BQB4 213 aa18.05■□□□□ 0.48
C9orf3-209ENST00000460573 OR2W1Q9Y3N9 320 aa18.05■□□□□ 0.48
C9orf3-209ENST00000460573 RBM7Q9Y580 266 aaKnown RBP18.05■□□□□ 0.48
C9orf3-209ENST00000460573 GABARAPH6UMI1 98 aa18.04■□□□□ 0.48
C9orf3-209ENST00000460573 GPR137BO60478 399 aa18.04■□□□□ 0.48
C9orf3-209ENST00000460573 CRYBA1P05813 215 aa18.04■□□□□ 0.48
C9orf3-209ENST00000460573 OR8U9P0C7N5 309 aa18.04■□□□□ 0.48
C9orf3-209ENST00000460573 FAM106CPP0CH98 169 aa18.04■□□□□ 0.48
C9orf3-209ENST00000460573 OR5H8P0DN80 308 aa18.04■□□□□ 0.48
C9orf3-209ENST00000460573 GPR12P47775 334 aa18.04■□□□□ 0.48
C9orf3-209ENST00000460573 OR3A3P47888 321 aa18.04■□□□□ 0.48
C9orf3-209ENST00000460573 REG1BP48304 166 aa18.04■□□□□ 0.48
C9orf3-209ENST00000460573 COMPP49747 757 aaPredicted RBP18.04■□□□□ 0.48
C9orf3-209ENST00000460573 FOXL1Q12952 345 aa18.04■□□□□ 0.48
C9orf3-209ENST00000460573 LY6EQ16553 131 aa18.04■□□□□ 0.48
C9orf3-209ENST00000460573 MOB3BQ86TA1 216 aa18.04■□□□□ 0.48
C9orf3-209ENST00000460573 DRAM1Q8N682 238 aa18.04■□□□□ 0.48
C9orf3-209ENST00000460573 OR8U1Q8NH10 309 aa18.04■□□□□ 0.48
C9orf3-209ENST00000460573 ABHD14BQ96IU4 210 aa18.04■□□□□ 0.48
C9orf3-209ENST00000460573 MTFP1Q9UDX5 166 aa18.04■□□□□ 0.48
C9orf3-209ENST00000460573 A6NDX4 124 aa18.03■□□□□ 0.48
C9orf3-209ENST00000460573 SLC22A5O76082 557 aa18.03■□□□□ 0.48
C9orf3-209ENST00000460573 FCER2P06734 321 aa18.03■□□□□ 0.48
C9orf3-209ENST00000460573 NFYAP23511 347 aaPredicted RBP18.03■□□□□ 0.48
C9orf3-209ENST00000460573 PTBP1P26599 531 aaKnown RBP eCLIP18.03■□□□□ 0.481e-7■■■□□ 14.7
C9orf3-209ENST00000460573 CD1BP29016 333 aa18.03■□□□□ 0.48
C9orf3-209ENST00000460573 LUMP51884 338 aaPredicted RBP18.03■□□□□ 0.48
C9orf3-209ENST00000460573 OVCH2Q7RTZ1 564 aa18.03■□□□□ 0.48
C9orf3-209ENST00000460573 OR5H2Q8NGV7 314 aa18.03■□□□□ 0.48
C9orf3-209ENST00000460573 OR52I2Q8NH67 350 aa18.03■□□□□ 0.48
C9orf3-209ENST00000460573 GIMAP1Q8WWP7 306 aa18.03■□□□□ 0.48
C9orf3-209ENST00000460573 ZNF251Q9BRH9 671 aa18.03■□□□□ 0.48
C9orf3-209ENST00000460573 RNF150Q9ULK6 438 aa18.03■□□□□ 0.48
C9orf3-209ENST00000460573 FAM181BA6NEQ2 426 aa18.02■□□□□ 0.48
C9orf3-209ENST00000460573 TUSC2O75896 110 aa18.02■□□□□ 0.48
C9orf3-209ENST00000460573 EBI3Q14213 229 aa18.02■□□□□ 0.48
C9orf3-209ENST00000460573 AWAT1Q58HT5 328 aa18.02■□□□□ 0.48
C9orf3-209ENST00000460573 FAM131AQ6UXB0 335 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms