RNA–Protein interactions for RNA: ENST00000460431.1

SMARCD3-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-204ENST00000460431 EDARADDQ8WWZ3 215 aa13.06□□□□□ -0.32
SMARCD3-204ENST00000460431 NABP2Q9BQ15 211 aa13.06□□□□□ -0.32
SMARCD3-204ENST00000460431 ZNF251Q9BRH9 671 aa13.06□□□□□ -0.32
SMARCD3-204ENST00000460431 TOLLIPQ9H0E2 274 aa13.06□□□□□ -0.32
SMARCD3-204ENST00000460431 C11orf54Q9H0W9 315 aaPredicted RBP13.06□□□□□ -0.32
SMARCD3-204ENST00000460431 RHBDL2Q9NX52 303 aa13.06□□□□□ -0.32
SMARCD3-204ENST00000460431 ZNF230Q9UIE0 474 aaPredicted RBP13.06□□□□□ -0.32
SMARCD3-204ENST00000460431 ELF5Q9UKW6 265 aaPredicted RBP13.06□□□□□ -0.32
SMARCD3-204ENST00000460431 ETV7Q9Y603 341 aa13.06□□□□□ -0.32
SMARCD3-204ENST00000460431 FBXO24O75426 580 aa13.05□□□□□ -0.32
SMARCD3-204ENST00000460431 DIRAS3O95661 229 aa13.05□□□□□ -0.32
SMARCD3-204ENST00000460431 GSTP1P09211 210 aaKnown RBP13.05□□□□□ -0.32
SMARCD3-204ENST00000460431 GSTT2P0CG29 244 aa13.05□□□□□ -0.32
SMARCD3-204ENST00000460431 GSTT2BP0CG30 244 aa13.05□□□□□ -0.32
SMARCD3-204ENST00000460431 CD28P10747 220 aa13.05□□□□□ -0.32
SMARCD3-204ENST00000460431 TALDO1P37837 337 aa13.05□□□□□ -0.32
SMARCD3-204ENST00000460431 RPS19P39019 145 aaKnown RBP13.05□□□□□ -0.32
SMARCD3-204ENST00000460431 SERPINB10P48595 397 aa13.05□□□□□ -0.32
SMARCD3-204ENST00000460431 PDLIM3Q53GG5 364 aaPredicted RBP13.05□□□□□ -0.32
SMARCD3-204ENST00000460431 C9orf152Q5JTZ5 239 aa13.05□□□□□ -0.32
SMARCD3-204ENST00000460431 HACD4Q5VWC8 232 aa13.05□□□□□ -0.32
SMARCD3-204ENST00000460431 HIST2H2BDQ6DRA6 164 aa13.05□□□□□ -0.32
SMARCD3-204ENST00000460431 Q6ZS49 121 aa13.05□□□□□ -0.32
SMARCD3-204ENST00000460431 CENPVQ7Z7K6 275 aaPredicted RBP13.05□□□□□ -0.32
SMARCD3-204ENST00000460431 CROCCP3Q8IVE0 287 aa13.05□□□□□ -0.32
SMARCD3-204ENST00000460431 Q8N9W7 124 aa13.05□□□□□ -0.32
SMARCD3-204ENST00000460431 OR8H1Q8NGG4 311 aa13.05□□□□□ -0.32
SMARCD3-204ENST00000460431 S1PR3Q99500 378 aa13.05□□□□□ -0.32
SMARCD3-204ENST00000460431 MRPL20Q9BYC9 149 aaKnown RBP13.05□□□□□ -0.32
SMARCD3-204ENST00000460431 NCBP2LA6PVI3 153 aaKnown RBP13.04□□□□□ -0.32
SMARCD3-204ENST00000460431 SMIM18P0DKX4 95 aa13.04□□□□□ -0.32
SMARCD3-204ENST00000460431 DTYMKP23919 212 aa13.04□□□□□ -0.32
SMARCD3-204ENST00000460431 LSM3P62310 102 aaKnown RBP13.04□□□□□ -0.32
SMARCD3-204ENST00000460431 C2orf68Q2NKX9 166 aa13.04□□□□□ -0.32
SMARCD3-204ENST00000460431 ZNF260Q3ZCT1 412 aa13.04□□□□□ -0.32
SMARCD3-204ENST00000460431 IGSF11Q5DX21 431 aa13.04□□□□□ -0.32
SMARCD3-204ENST00000460431 OR5AU1Q8NGC0 362 aa13.04□□□□□ -0.32
SMARCD3-204ENST00000460431 OR13F1Q8NGS4 319 aa13.04□□□□□ -0.32
SMARCD3-204ENST00000460431 MAFIPQ8WZ33 124 aa13.04□□□□□ -0.32
SMARCD3-204ENST00000460431 SLC25A38Q96DW6 304 aa13.04□□□□□ -0.32
SMARCD3-204ENST00000460431 RBMXL1Q96E39 390 aaKnown RBP13.04□□□□□ -0.32
SMARCD3-204ENST00000460431 ABHD14BQ96IU4 210 aa13.04□□□□□ -0.32
SMARCD3-204ENST00000460431 CABLES2Q9BTV7 478 aa13.04□□□□□ -0.32
SMARCD3-204ENST00000460431 FUNDC2Q9BWH2 189 aa13.04□□□□□ -0.32
SMARCD3-204ENST00000460431 MMP27Q9H306 513 aa13.04□□□□□ -0.32
SMARCD3-204ENST00000460431 RDH8Q9NYR8 311 aa13.04□□□□□ -0.32
SMARCD3-204ENST00000460431 SPATA2Q9UM82 520 aa13.04□□□□□ -0.32
SMARCD3-204ENST00000460431 PLXNB1O43157 2135 aa13.04□□□□□ -0.32
SMARCD3-204ENST00000460431 TRBV6-7A0A0A0MS04 114 aa13.03□□□□□ -0.32
SMARCD3-204ENST00000460431 IGHG2P01859 326 aa13.03□□□□□ -0.32
SMARCD3-204ENST00000460431 CSF1P09603 554 aa13.03□□□□□ -0.32
SMARCD3-204ENST00000460431 F2RL1P55085 397 aa13.03□□□□□ -0.32
SMARCD3-204ENST00000460431 PITPNAQ00169 270 aa13.03□□□□□ -0.32
SMARCD3-204ENST00000460431 PNLIPRP3Q17RR3 467 aa13.03□□□□□ -0.32
SMARCD3-204ENST00000460431 RPL39P5Q59GN2 51 aa13.03□□□□□ -0.32
SMARCD3-204ENST00000460431 ABCG5Q9H222 651 aa13.03□□□□□ -0.32
SMARCD3-204ENST00000460431 DCSTAMPQ9H295 470 aa13.03□□□□□ -0.32
SMARCD3-204ENST00000460431 LIN7CQ9NUP9 197 aaKnown RBP13.03□□□□□ -0.32
SMARCD3-204ENST00000460431 VWFP04275 2813 aa13.03□□□□□ -0.32
SMARCD3-204ENST00000460431 IGKV1D-8A0A087WSZ0 117 aa13.02□□□□□ -0.33
SMARCD3-204ENST00000460431 A0A0A6YYH2 397 aa13.02□□□□□ -0.33
SMARCD3-204ENST00000460431 TMEM235A6NFC5 223 aa13.02□□□□□ -0.33
SMARCD3-204ENST00000460431 A6NJ64 397 aa13.02□□□□□ -0.33
SMARCD3-204ENST00000460431 BET1O15155 118 aa13.02□□□□□ -0.33
SMARCD3-204ENST00000460431 PROP1O75360 226 aa13.02□□□□□ -0.33
SMARCD3-204ENST00000460431 TSPAN15O95858 294 aa13.02□□□□□ -0.33
SMARCD3-204ENST00000460431 CT45A6P0DMU7 189 aa13.02□□□□□ -0.33
SMARCD3-204ENST00000460431 CT45A5P0DMU8 189 aa13.02□□□□□ -0.33
SMARCD3-204ENST00000460431 CT45A7P0DMV0 189 aa13.02□□□□□ -0.33
SMARCD3-204ENST00000460431 CD83Q01151 205 aa13.02□□□□□ -0.33
SMARCD3-204ENST00000460431 FAM71E2Q8N5Q1 922 aa13.02□□□□□ -0.33
SMARCD3-204ENST00000460431 OR10J5Q8NHC4 309 aa13.02□□□□□ -0.33
SMARCD3-204ENST00000460431 PHF21AQ96BD5 680 aa13.02□□□□□ -0.33
SMARCD3-204ENST00000460431 RITA1Q96K30 269 aa13.02□□□□□ -0.33
SMARCD3-204ENST00000460431 CITED2Q99967 270 aaPredicted RBP13.02□□□□□ -0.33
SMARCD3-204ENST00000460431 RNF150Q9ULK6 438 aa13.02□□□□□ -0.33
SMARCD3-204ENST00000460431 ACTBP60709 375 aa13.01□□□□□ -0.33
SMARCD3-204ENST00000460431 TCTEX1D4Q5JR98 221 aa13.01□□□□□ -0.33
SMARCD3-204ENST00000460431 SLC35E3Q7Z769 313 aa13.01□□□□□ -0.33
SMARCD3-204ENST00000460431 NDUFA11Q86Y39 141 aa13.01□□□□□ -0.33
SMARCD3-204ENST00000460431 NUDCD2Q8WVJ2 157 aa13.01□□□□□ -0.33
SMARCD3-204ENST00000460431 RASL11BQ9BPW5 248 aa13.01□□□□□ -0.33
SMARCD3-204ENST00000460431 ST6GALNAC5Q9BVH7 336 aa13.01□□□□□ -0.33
SMARCD3-204ENST00000460431 ZNF221Q9UK13 617 aa13.01□□□□□ -0.33
SMARCD3-204ENST00000460431 GAB2Q9UQC2 676 aa13.01□□□□□ -0.33
SMARCD3-204ENST00000460431 CMYA5Q8N3K9 4069 aa13.01□□□□□ -0.33
SMARCD3-204ENST00000460431 TRAV18A0A075B6X5 111 aa13□□□□□ -0.33
SMARCD3-204ENST00000460431 OR5H14A6NHG9 310 aa13□□□□□ -0.33
SMARCD3-204ENST00000460431 LINC01548A6NM66 108 aa13□□□□□ -0.33
SMARCD3-204ENST00000460431 ADARB2-AS1A8MUL3 147 aa13□□□□□ -0.33
SMARCD3-204ENST00000460431 SSX5O60225 188 aa13□□□□□ -0.33
SMARCD3-204ENST00000460431 MC5RP33032 325 aa13□□□□□ -0.33
SMARCD3-204ENST00000460431 GNG2P59768 71 aa13□□□□□ -0.33
SMARCD3-204ENST00000460431 NCS1P62166 190 aa13□□□□□ -0.33
SMARCD3-204ENST00000460431 C10orf99Q6UWK7 81 aa13□□□□□ -0.33
SMARCD3-204ENST00000460431 OR5AN1Q8NGI8 311 aa13□□□□□ -0.33
SMARCD3-204ENST00000460431 CHPT1Q8WUD6 406 aa13□□□□□ -0.33
SMARCD3-204ENST00000460431 SLC25A46Q96AG3 418 aa13□□□□□ -0.33
SMARCD3-204ENST00000460431 DIABLOQ9NR28 239 aa13□□□□□ -0.33
SMARCD3-204ENST00000460431 H0YJW9 148 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms