RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 E5RGE8 158 aa13.15□□□□□ -0.3
LMNB1-203ENST00000460265 SIAH2O43255 324 aa13.15□□□□□ -0.3
LMNB1-203ENST00000460265 MBPP02686 304 aaPredicted RBP13.15□□□□□ -0.3
LMNB1-203ENST00000460265 GABRA2P47869 451 aa13.15□□□□□ -0.3
LMNB1-203ENST00000460265 CEBPDP49716 269 aaPredicted RBP13.15□□□□□ -0.3
LMNB1-203ENST00000460265 BTNL3Q6UXE8 466 aa13.15□□□□□ -0.3
LMNB1-203ENST00000460265 LIAT1Q6ZQX7 453 aa13.15□□□□□ -0.3
LMNB1-203ENST00000460265 ZNF826PQ6ZT77 177 aa13.15□□□□□ -0.3
LMNB1-203ENST00000460265 TP53RKQ96S44 253 aa13.15□□□□□ -0.3
LMNB1-203ENST00000460265 MSL2Q9HCI7 577 aa13.15□□□□□ -0.3
LMNB1-203ENST00000460265 GAB2Q9UQC2 676 aa13.15□□□□□ -0.3
LMNB1-203ENST00000460265 NSG2Q9Y328 171 aa13.15□□□□□ -0.3
LMNB1-203ENST00000460265 WSB1Q9Y6I7 421 aa13.15□□□□□ -0.3
LMNB1-203ENST00000460265 ABCA1O95477 2261 aa13.15□□□□□ -0.3
LMNB1-203ENST00000460265 XKRY2A2RUG3 117 aa13.15□□□□□ -0.3
LMNB1-203ENST00000460265 FTH1P19P0C7X4 201 aa13.15□□□□□ -0.3
LMNB1-203ENST00000460265 CCL20P78556 96 aa13.15□□□□□ -0.3
LMNB1-203ENST00000460265 IQCJQ1A5X6 159 aa13.15□□□□□ -0.3
LMNB1-203ENST00000460265 ZNF880Q6PDB4 577 aa13.15□□□□□ -0.3
LMNB1-203ENST00000460265 FOXL2NBQ6ZUU3 175 aa13.15□□□□□ -0.3
LMNB1-203ENST00000460265 ZFP62Q8NB50 900 aaPredicted RBP13.15□□□□□ -0.3
LMNB1-203ENST00000460265 NINJ1Q92982 152 aa13.15□□□□□ -0.3
LMNB1-203ENST00000460265 A0A087WWC5 75 aa13.14□□□□□ -0.31
LMNB1-203ENST00000460265 GCH1P30793 250 aa13.14□□□□□ -0.31
LMNB1-203ENST00000460265 PPP1CBP62140 327 aa13.14□□□□□ -0.31
LMNB1-203ENST00000460265 PMS2P11Q13670 270 aa13.14□□□□□ -0.31
LMNB1-203ENST00000460265 TPRX1Q8N7U7 411 aa13.14□□□□□ -0.31
LMNB1-203ENST00000460265 ELOVL1Q9BW60 279 aa13.14□□□□□ -0.31
LMNB1-203ENST00000460265 IL18BPO95998 194 aa13.14□□□□□ -0.31
LMNB1-203ENST00000460265 RND3P61587 244 aa13.14□□□□□ -0.31
LMNB1-203ENST00000460265 OR8B8Q15620 311 aa13.14□□□□□ -0.31
LMNB1-203ENST00000460265 MYPOPQ86VE0 399 aaPredicted RBP13.14□□□□□ -0.31
LMNB1-203ENST00000460265 OR1P1Q8NH06 330 aa13.14□□□□□ -0.31
LMNB1-203ENST00000460265 SLC25A40Q8TBP6 338 aa13.14□□□□□ -0.31
LMNB1-203ENST00000460265 RTL8AQ9BWD3 113 aa13.14□□□□□ -0.31
LMNB1-203ENST00000460265 FAM234AQ9H0X4 552 aa13.14□□□□□ -0.31
LMNB1-203ENST00000460265 RPS16P62249 146 aaKnown RBP13.14□□□□□ -0.31
LMNB1-203ENST00000460265 MRPS11P82912 194 aaKnown RBP13.14□□□□□ -0.31
LMNB1-203ENST00000460265 HOXA4Q00056 320 aaPredicted RBP13.14□□□□□ -0.31
LMNB1-203ENST00000460265 TMEM211Q6ICI0 200 aa13.14□□□□□ -0.31
LMNB1-203ENST00000460265 KCNIP1Q9NZI2 227 aa13.14□□□□□ -0.31
LMNB1-203ENST00000460265 CLDN34H7C241 214 aa13.13□□□□□ -0.31
LMNB1-203ENST00000460265 M0QZK8 103 aa13.13□□□□□ -0.31
LMNB1-203ENST00000460265 GGCTO75223 188 aaKnown RBP13.13□□□□□ -0.31
LMNB1-203ENST00000460265 CRYABP02511 175 aaKnown RBP13.13□□□□□ -0.31
LMNB1-203ENST00000460265 OR5A2Q8NGI9 324 aa13.13□□□□□ -0.31
LMNB1-203ENST00000460265 SPIN2AQ99865 258 aa13.13□□□□□ -0.31
LMNB1-203ENST00000460265 SPIN2BQ9BPZ2 258 aa13.13□□□□□ -0.31
LMNB1-203ENST00000460265 PLEKHA2Q9HB19 425 aa13.13□□□□□ -0.31
LMNB1-203ENST00000460265 TFF1P04155 84 aa13.13□□□□□ -0.31
LMNB1-203ENST00000460265 CXorf66Q5JRM2 361 aaPredicted RBP13.13□□□□□ -0.31
LMNB1-203ENST00000460265 SPRR3Q9UBC9 169 aa13.13□□□□□ -0.31
LMNB1-203ENST00000460265 IGLV3-1P01715 115 aa13.12□□□□□ -0.31
LMNB1-203ENST00000460265 IAPPP10997 89 aa13.12□□□□□ -0.31
LMNB1-203ENST00000460265 FGF12P61328 243 aa13.12□□□□□ -0.31
LMNB1-203ENST00000460265 HLA-DRB3P79483 266 aa13.12□□□□□ -0.31
LMNB1-203ENST00000460265 TEX38Q6PEX7 206 aa13.12□□□□□ -0.31
LMNB1-203ENST00000460265 OR2G3Q8NGZ4 309 aa13.12□□□□□ -0.31
LMNB1-203ENST00000460265 TMEM18Q96B42 140 aa13.12□□□□□ -0.31
LMNB1-203ENST00000460265 POM121L2Q96KW2 1035 aa13.12□□□□□ -0.31
LMNB1-203ENST00000460265 TECTBQ96PL2 329 aa13.12□□□□□ -0.31
LMNB1-203ENST00000460265 CHD3Q12873 2000 aaKnown RBP13.12□□□□□ -0.31
LMNB1-203ENST00000460265 NCKAP5O14513 1909 aa13.12□□□□□ -0.31
LMNB1-203ENST00000460265 TLN1Q9Y490 2541 aaKnown RBP13.12□□□□□ -0.31
LMNB1-203ENST00000460265 CRIP3Q6Q6R5 217 aa13.12□□□□□ -0.31
LMNB1-203ENST00000460265 DIRC2Q96SL1 478 aa13.12□□□□□ -0.31
LMNB1-203ENST00000460265 DEDDO75618 318 aa13.12□□□□□ -0.31
LMNB1-203ENST00000460265 WISP2O76076 250 aa13.12□□□□□ -0.31
LMNB1-203ENST00000460265 RPL23AP62750 156 aaKnown RBP13.12□□□□□ -0.31
LMNB1-203ENST00000460265 GAGE1Q13065 139 aa13.12□□□□□ -0.31
LMNB1-203ENST00000460265 CLEC12BQ2HXU8 276 aa13.12□□□□□ -0.31
LMNB1-203ENST00000460265 ZNF66Q6ZN08 573 aa13.12□□□□□ -0.31
LMNB1-203ENST00000460265 ZNF818PQ6ZRF7 136 aa13.12□□□□□ -0.31
LMNB1-203ENST00000460265 DEFB108AA8MXU0 73 aa13.11□□□□□ -0.31
LMNB1-203ENST00000460265 UCP2P55851 309 aa13.11□□□□□ -0.31
LMNB1-203ENST00000460265 RAB11AP62491 216 aa13.11□□□□□ -0.31
LMNB1-203ENST00000460265 TLE4Q04727 773 aa13.11□□□□□ -0.31
LMNB1-203ENST00000460265 OR1K1Q8NGR3 316 aa13.11□□□□□ -0.31
LMNB1-203ENST00000460265 SSC4DQ8WTU2 575 aa13.11□□□□□ -0.31
LMNB1-203ENST00000460265 TMEM45BQ96B21 275 aa13.11□□□□□ -0.31
LMNB1-203ENST00000460265 SRP19P09132 144 aaKnown RBP13.11□□□□□ -0.31
LMNB1-203ENST00000460265 P2RY1P47900 373 aa13.11□□□□□ -0.31
LMNB1-203ENST00000460265 TMEM187Q14656 261 aa13.11□□□□□ -0.31
LMNB1-203ENST00000460265 RNF151Q2KHN1 245 aa13.11□□□□□ -0.31
LMNB1-203ENST00000460265 OR4X1Q8NH49 305 aa13.11□□□□□ -0.31
LMNB1-203ENST00000460265 RNASEH2CQ8TDP1 164 aaKnown RBP13.11□□□□□ -0.31
LMNB1-203ENST00000460265 TMEM37Q8WXS4 190 aa13.11□□□□□ -0.31
LMNB1-203ENST00000460265 WFIKKN1Q96NZ8 548 aa13.11□□□□□ -0.31
LMNB1-203ENST00000460265 MRPS18CQ9Y3D5 142 aaKnown RBP13.11□□□□□ -0.31
LMNB1-203ENST00000460265 IGHV3-43A0A0B4J1X8 118 aa13.11□□□□□ -0.31
LMNB1-203ENST00000460265 IGKV1D-13A0A0B4J2D9 117 aa13.11□□□□□ -0.31
LMNB1-203ENST00000460265 MSTNO14793 375 aa13.11□□□□□ -0.31
LMNB1-203ENST00000460265 IGHV3-43DP0DP04 118 aa13.11□□□□□ -0.31
LMNB1-203ENST00000460265 IGKV1-13P0DP09 117 aa13.11□□□□□ -0.31
LMNB1-203ENST00000460265 WNT5AP41221 380 aa13.11□□□□□ -0.31
LMNB1-203ENST00000460265 SMDT1Q9H4I9 107 aa13.11□□□□□ -0.31
LMNB1-203ENST00000460265 WFDC1Q9HC57 220 aa13.11□□□□□ -0.31
LMNB1-203ENST00000460265 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.1□□□□□ -0.31
LMNB1-203ENST00000460265 TRDCB7Z8K6 153 aa13.1□□□□□ -0.31
LMNB1-203ENST00000460265 CA11O75493 328 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms