RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 G6PCP35575 357 aa0.65□□□□□ -2.31
SCARNA18-201ENST00000459004 OR1E2P47887 323 aa0.65□□□□□ -2.31
SCARNA18-201ENST00000459004 ACTBP60709 375 aa0.65□□□□□ -2.31
SCARNA18-201ENST00000459004 ACTG1P63261 375 aa0.65□□□□□ -2.31
SCARNA18-201ENST00000459004 PSG3Q16557 428 aa0.65□□□□□ -2.31
SCARNA18-201ENST00000459004 TTC33Q6PID6 262 aaPredicted RBP0.65□□□□□ -2.31
SCARNA18-201ENST00000459004 LHFPL1Q86WI0 220 aa0.65□□□□□ -2.31
SCARNA18-201ENST00000459004 TMEM75Q8N9X5 138 aa0.65□□□□□ -2.31
SCARNA18-201ENST00000459004 TRNT1Q96Q11 434 aaKnown RBP0.65□□□□□ -2.31
SCARNA18-201ENST00000459004 HBEGFQ99075 208 aa0.65□□□□□ -2.31
SCARNA18-201ENST00000459004 UGT2B28Q9BY64 529 aa0.65□□□□□ -2.31
SCARNA18-201ENST00000459004 MED28Q9H204 178 aa0.65□□□□□ -2.31
SCARNA18-201ENST00000459004 KIAA0232Q92628 1395 aa0.65□□□□□ -2.31
SCARNA18-201ENST00000459004 MUC16Q8WXI7 14507 aa0.64□□□□□ -2.31
SCARNA18-201ENST00000459004 TMSB15BA0A087X1C1 80 aa0.64□□□□□ -2.31
SCARNA18-201ENST00000459004 TRAV41A0A0B4J266 112 aa0.64□□□□□ -2.31
SCARNA18-201ENST00000459004 SLC17A3O00476 420 aa0.64□□□□□ -2.31
SCARNA18-201ENST00000459004 SGCEO43556 437 aa0.64□□□□□ -2.31
SCARNA18-201ENST00000459004 PSMG1O95456 288 aa0.64□□□□□ -2.31
SCARNA18-201ENST00000459004 ZNF728P0DKX0 622 aa0.64□□□□□ -2.31
SCARNA18-201ENST00000459004 XCL1P47992 114 aa0.64□□□□□ -2.31
SCARNA18-201ENST00000459004 IDH3GP51553 393 aaPredicted RBP0.64□□□□□ -2.31
SCARNA18-201ENST00000459004 CARD18P57730 90 aa0.64□□□□□ -2.31
SCARNA18-201ENST00000459004 TAS2R45P59539 299 aa0.64□□□□□ -2.31
SCARNA18-201ENST00000459004 FAM3AP98173 230 aa0.64□□□□□ -2.31
SCARNA18-201ENST00000459004 RAB31Q13636 194 aa0.64□□□□□ -2.31
SCARNA18-201ENST00000459004 HSP90B2PQ58FF3 399 aa0.64□□□□□ -2.31
SCARNA18-201ENST00000459004 CCDC112Q8NEF3 446 aa0.64□□□□□ -2.31
SCARNA18-201ENST00000459004 OR5J2Q8NH18 312 aa0.64□□□□□ -2.31
SCARNA18-201ENST00000459004 OR51H1Q8NH63 302 aa0.64□□□□□ -2.31
SCARNA18-201ENST00000459004 PPWD1Q96BP3 646 aaKnown RBP0.64□□□□□ -2.31
SCARNA18-201ENST00000459004 ABHD14BQ96IU4 210 aa0.64□□□□□ -2.31
SCARNA18-201ENST00000459004 SLC35G5Q96KT7 338 aa0.64□□□□□ -2.31
SCARNA18-201ENST00000459004 ACBD6Q9BR61 282 aa0.64□□□□□ -2.31
SCARNA18-201ENST00000459004 MRM2Q9UI43 246 aaKnown RBP0.64□□□□□ -2.31
SCARNA18-201ENST00000459004 SOX21Q9Y651 276 aaPredicted RBP0.64□□□□□ -2.31
SCARNA18-201ENST00000459004 NUP153P49790 1475 aaKnown RBP0.64□□□□□ -2.31
SCARNA18-201ENST00000459004 CLUHO75153 1309 aa0.64□□□□□ -2.31
SCARNA18-201ENST00000459004 IGKV2-40A0A087WW87 121 aaPredicted RBP0.63□□□□□ -2.31
SCARNA18-201ENST00000459004 TRGV5A0A0B4J1U4 118 aa0.63□□□□□ -2.31
SCARNA18-201ENST00000459004 ZNF705FA8MVS1 300 aaPredicted RBP0.63□□□□□ -2.31
SCARNA18-201ENST00000459004 OR11H12B2RN74 326 aa0.63□□□□□ -2.31
SCARNA18-201ENST00000459004 NDUFS8O00217 210 aa0.63□□□□□ -2.31
SCARNA18-201ENST00000459004 IGKV2D-40P01614 121 aaPredicted RBP0.63□□□□□ -2.31
SCARNA18-201ENST00000459004 IGLV3-27P01718 113 aa0.63□□□□□ -2.31
SCARNA18-201ENST00000459004 CCL2P13500 99 aa0.63□□□□□ -2.31
SCARNA18-201ENST00000459004 TBC1D28Q2M2D7 210 aa0.63□□□□□ -2.31
SCARNA18-201ENST00000459004 TMEM249Q2WGJ8 235 aa0.63□□□□□ -2.31
SCARNA18-201ENST00000459004 SLC35E3Q7Z769 313 aa0.63□□□□□ -2.31
SCARNA18-201ENST00000459004 LRRC28Q86X40 367 aaPredicted RBP0.63□□□□□ -2.31
SCARNA18-201ENST00000459004 OR8B12Q8NGG6 310 aa0.63□□□□□ -2.31
SCARNA18-201ENST00000459004 OR11H2Q8NH07 326 aa0.63□□□□□ -2.31
SCARNA18-201ENST00000459004 MSANTD3Q96H12 275 aa0.63□□□□□ -2.31
SCARNA18-201ENST00000459004 UBQLN4Q9NRR5 601 aa0.63□□□□□ -2.31
SCARNA18-201ENST00000459004 SNX10Q9Y5X0 201 aa0.63□□□□□ -2.31
SCARNA18-201ENST00000459004 CCDC88CQ9P219 2028 aa0.63□□□□□ -2.31
SCARNA18-201ENST00000459004 WDR90Q96KV7 1748 aa0.63□□□□□ -2.31
SCARNA18-201ENST00000459004 RFPL4AA6NLU0 287 aa0.62□□□□□ -2.31
SCARNA18-201ENST00000459004 RFPL4AL1F8VTS6 287 aa0.62□□□□□ -2.31
SCARNA18-201ENST00000459004 IGHV1-69P01742 117 aa0.62□□□□□ -2.31
SCARNA18-201ENST00000459004 C1QCP02747 245 aa0.62□□□□□ -2.31
SCARNA18-201ENST00000459004 UCHL1P09936 223 aa0.62□□□□□ -2.31
SCARNA18-201ENST00000459004 LIMS3P0CW19 117 aa0.62□□□□□ -2.31
SCARNA18-201ENST00000459004 LIMS4P0CW20 117 aa0.62□□□□□ -2.31
SCARNA18-201ENST00000459004 OR13C7P0DN81 318 aa0.62□□□□□ -2.31
SCARNA18-201ENST00000459004 CD24P25063 80 aa0.62□□□□□ -2.31
SCARNA18-201ENST00000459004 CRYBB3P26998 211 aa0.62□□□□□ -2.31
SCARNA18-201ENST00000459004 SERPINB10P48595 397 aa0.62□□□□□ -2.31
SCARNA18-201ENST00000459004 CTBP2P56545 445 aa0.62□□□□□ -2.31
SCARNA18-201ENST00000459004 LINC00313P59037 77 aa0.62□□□□□ -2.31
SCARNA18-201ENST00000459004 GLO1Q04760 184 aa0.62□□□□□ -2.31
SCARNA18-201ENST00000459004 SLC38A11Q08AI6 406 aa0.62□□□□□ -2.31
SCARNA18-201ENST00000459004 EXOC3L4Q17RC7 722 aa0.62□□□□□ -2.31
SCARNA18-201ENST00000459004 AMTNQ6UX39 209 aa0.62□□□□□ -2.31
SCARNA18-201ENST00000459004 PLCZ1Q86YW0 608 aa0.62□□□□□ -2.31
SCARNA18-201ENST00000459004 CNEP1R1Q8N9A8 125 aa0.62□□□□□ -2.31
SCARNA18-201ENST00000459004 TNFAIP8L1Q8WVP5 186 aa0.62□□□□□ -2.31
SCARNA18-201ENST00000459004 ASB17Q8WXJ9 295 aa0.62□□□□□ -2.31
SCARNA18-201ENST00000459004 RORBQ92753 470 aa0.62□□□□□ -2.31
SCARNA18-201ENST00000459004 CCDC127Q96BQ5 260 aa0.62□□□□□ -2.31
SCARNA18-201ENST00000459004 CCDC124Q96CT7 223 aaKnown RBP0.62□□□□□ -2.31
SCARNA18-201ENST00000459004 C8orf4Q9NR00 106 aa0.62□□□□□ -2.31
SCARNA18-201ENST00000459004 HHLA3Q9XRX5 114 aa0.62□□□□□ -2.31
SCARNA18-201ENST00000459004 CHD2O14647 1828 aaKnown RBP0.61□□□□□ -2.31
SCARNA18-201ENST00000459004 KMT2BQ9UMN6 2715 aaPredicted RBP0.61□□□□□ -2.31
SCARNA18-201ENST00000459004 IGKV3D-7A0A0C4DH55 119 aa0.61□□□□□ -2.31
SCARNA18-201ENST00000459004 IGKV3OR2-268A0A0C4DH90 116 aa0.61□□□□□ -2.31
SCARNA18-201ENST00000459004 MDFIC2A0A1B0GVS7 189 aa0.61□□□□□ -2.31
SCARNA18-201ENST00000459004 F8W036 122 aa0.61□□□□□ -2.31
SCARNA18-201ENST00000459004 UBE2L6O14933 153 aa0.61□□□□□ -2.31
SCARNA18-201ENST00000459004 FADS2O95864 444 aaKnown RBP0.61□□□□□ -2.31
SCARNA18-201ENST00000459004 TMEM258P61165 79 aa0.61□□□□□ -2.31
SCARNA18-201ENST00000459004 PRB3Q04118 309 aaPredicted RBP0.61□□□□□ -2.31
SCARNA18-201ENST00000459004 OR4D1Q15615 310 aa0.61□□□□□ -2.31
SCARNA18-201ENST00000459004 ZNF791Q3KP31 576 aaPredicted RBP0.61□□□□□ -2.31
SCARNA18-201ENST00000459004 UNQ6190/PRO20217Q6UXQ8 127 aa0.61□□□□□ -2.31
SCARNA18-201ENST00000459004 SCGB1D4Q6XE38 83 aa0.61□□□□□ -2.31
SCARNA18-201ENST00000459004 NATD1Q8N6N6 113 aa0.61□□□□□ -2.31
SCARNA18-201ENST00000459004 OR2D3Q8NGH3 330 aa0.61□□□□□ -2.31
SCARNA18-201ENST00000459004 CCDC12Q8WUD4 166 aaPredicted RBP0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms