RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 CABLES2Q9BTV7 478 aa13.77□□□□□ -0.21
USP39-208ENST00000455732 TOLLIPQ9H0E2 274 aa13.77□□□□□ -0.21
USP39-208ENST00000455732 PARP12Q9H0J9 701 aaKnown RBP13.77□□□□□ -0.21
USP39-208ENST00000455732 RHBDL2Q9NX52 303 aa13.77□□□□□ -0.21
USP39-208ENST00000455732 A0A075B6Q4 140 aa13.76□□□□□ -0.21
USP39-208ENST00000455732 ZNF736B4DX44 427 aaPredicted RBP13.76□□□□□ -0.21
USP39-208ENST00000455732 RAB29O14966 203 aa13.76□□□□□ -0.21
USP39-208ENST00000455732 ST8SIA5O15466 376 aa13.76□□□□□ -0.21
USP39-208ENST00000455732 FABP7O15540 132 aa13.76□□□□□ -0.21
USP39-208ENST00000455732 HSPA12AO43301 675 aa13.76□□□□□ -0.21
USP39-208ENST00000455732 FBXO24O75426 580 aa13.76□□□□□ -0.21
USP39-208ENST00000455732 GSTP1P09211 210 aaKnown RBP13.76□□□□□ -0.21
USP39-208ENST00000455732 CSF1P09603 554 aa13.76□□□□□ -0.21
USP39-208ENST00000455732 SMIM18P0DKX4 95 aa13.76□□□□□ -0.21
USP39-208ENST00000455732 DTYMKP23919 212 aa13.76□□□□□ -0.21
USP39-208ENST00000455732 CEACAM6P40199 344 aa13.76□□□□□ -0.21
USP39-208ENST00000455732 IDNKQ5T6J7 187 aa13.76□□□□□ -0.21
USP39-208ENST00000455732 OR13F1Q8NGS4 319 aa13.76□□□□□ -0.21
USP39-208ENST00000455732 SLC25A38Q96DW6 304 aa13.76□□□□□ -0.21
USP39-208ENST00000455732 NABP2Q9BQ15 211 aa13.76□□□□□ -0.21
USP39-208ENST00000455732 ZNF251Q9BRH9 671 aa13.76□□□□□ -0.21
USP39-208ENST00000455732 MRPL20Q9BYC9 149 aaKnown RBP13.76□□□□□ -0.21
USP39-208ENST00000455732 A0A0A6YYH2 397 aa13.75□□□□□ -0.21
USP39-208ENST00000455732 A6NJ64 397 aa13.75□□□□□ -0.21
USP39-208ENST00000455732 SH2D7A6NKC9 451 aaPredicted RBP13.75□□□□□ -0.21
USP39-208ENST00000455732 OR3A3P47888 321 aa13.75□□□□□ -0.21
USP39-208ENST00000455732 ARFRP1Q13795 201 aa13.75□□□□□ -0.21
USP39-208ENST00000455732 CDNFQ49AH0 187 aa13.75□□□□□ -0.21
USP39-208ENST00000455732 HACD4Q5VWC8 232 aa13.75□□□□□ -0.21
USP39-208ENST00000455732 OR5H6Q8NGV6 325 aa13.75□□□□□ -0.21
USP39-208ENST00000455732 S1PR3Q99500 378 aa13.75□□□□□ -0.21
USP39-208ENST00000455732 C11orf54Q9H0W9 315 aaPredicted RBP13.75□□□□□ -0.21
USP39-208ENST00000455732 PLSCR3Q9NRY6 295 aa13.75□□□□□ -0.21
USP39-208ENST00000455732 NOTCH3Q9UM47 2321 aa13.74□□□□□ -0.21
USP39-208ENST00000455732 CD28P10747 220 aa13.74□□□□□ -0.21
USP39-208ENST00000455732 TGFBR1P36897 503 aa13.74□□□□□ -0.21
USP39-208ENST00000455732 TALDO1P37837 337 aa13.74□□□□□ -0.21
USP39-208ENST00000455732 PITPNAQ00169 270 aa13.74□□□□□ -0.21
USP39-208ENST00000455732 ZNF260Q3ZCT1 412 aa13.74□□□□□ -0.21
USP39-208ENST00000455732 Q8N9W7 124 aa13.74□□□□□ -0.21
USP39-208ENST00000455732 FAM110DQ8TAY7 271 aaPredicted RBP13.74□□□□□ -0.21
USP39-208ENST00000455732 FUNDC2Q9BWH2 189 aa13.74□□□□□ -0.21
USP39-208ENST00000455732 LIN7CQ9NUP9 197 aaKnown RBP13.74□□□□□ -0.21
USP39-208ENST00000455732 RDH8Q9NYR8 311 aa13.74□□□□□ -0.21
USP39-208ENST00000455732 ELF5Q9UKW6 265 aaPredicted RBP13.74□□□□□ -0.21
USP39-208ENST00000455732 SPATA2Q9UM82 520 aa13.74□□□□□ -0.21
USP39-208ENST00000455732 TRBV6-7A0A0A0MS04 114 aa13.73□□□□□ -0.21
USP39-208ENST00000455732 NCBP2LA6PVI3 153 aaKnown RBP13.73□□□□□ -0.21
USP39-208ENST00000455732 IGHG2P01859 326 aa13.73□□□□□ -0.21
USP39-208ENST00000455732 GSTT2P0CG29 244 aa13.73□□□□□ -0.21
USP39-208ENST00000455732 GSTT2BP0CG30 244 aa13.73□□□□□ -0.21
USP39-208ENST00000455732 RPS19P39019 145 aaKnown RBP13.73□□□□□ -0.21
USP39-208ENST00000455732 PNLIPRP3Q17RR3 467 aa13.73□□□□□ -0.21
USP39-208ENST00000455732 C9orf152Q5JTZ5 239 aa13.73□□□□□ -0.21
USP39-208ENST00000455732 FAM71E2Q8N5Q1 922 aa13.73□□□□□ -0.21
USP39-208ENST00000455732 ABCG5Q9H222 651 aa13.73□□□□□ -0.21
USP39-208ENST00000455732 DCSTAMPQ9H295 470 aa13.73□□□□□ -0.21
USP39-208ENST00000455732 ZNF230Q9UIE0 474 aaPredicted RBP13.73□□□□□ -0.21
USP39-208ENST00000455732 TGP01266 2768 aa13.73□□□□□ -0.21
USP39-208ENST00000455732 TMEM235A6NFC5 223 aa13.72□□□□□ -0.21
USP39-208ENST00000455732 OR5H14A6NHG9 310 aa13.72□□□□□ -0.21
USP39-208ENST00000455732 ADARB2-AS1A8MUL3 147 aa13.72□□□□□ -0.21
USP39-208ENST00000455732 LSM3P62310 102 aaKnown RBP13.72□□□□□ -0.21
USP39-208ENST00000455732 RPL39P5Q59GN2 51 aa13.72□□□□□ -0.21
USP39-208ENST00000455732 IGSF11Q5DX21 431 aa13.72□□□□□ -0.21
USP39-208ENST00000455732 NDUFA11Q86Y39 141 aa13.72□□□□□ -0.21
USP39-208ENST00000455732 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.72□□□□□ -0.21
USP39-208ENST00000455732 OR5AU1Q8NGC0 362 aa13.72□□□□□ -0.21
USP39-208ENST00000455732 OR10J5Q8NHC4 309 aa13.72□□□□□ -0.21
USP39-208ENST00000455732 MAFIPQ8WZ33 124 aa13.72□□□□□ -0.21
USP39-208ENST00000455732 ABHD14BQ96IU4 210 aa13.72□□□□□ -0.21
USP39-208ENST00000455732 BET1O15155 118 aa13.71□□□□□ -0.21
USP39-208ENST00000455732 CT45A6P0DMU7 189 aa13.71□□□□□ -0.21
USP39-208ENST00000455732 CT45A5P0DMU8 189 aa13.71□□□□□ -0.21
USP39-208ENST00000455732 CT45A7P0DMV0 189 aa13.71□□□□□ -0.21
USP39-208ENST00000455732 F2RL1P55085 397 aa13.71□□□□□ -0.21
USP39-208ENST00000455732 GNG2P59768 71 aa13.71□□□□□ -0.21
USP39-208ENST00000455732 CD83Q01151 205 aa13.71□□□□□ -0.21
USP39-208ENST00000455732 SLC35E3Q7Z769 313 aa13.71□□□□□ -0.21
USP39-208ENST00000455732 CENPVQ7Z7K6 275 aaPredicted RBP13.71□□□□□ -0.21
USP39-208ENST00000455732 NUDCD2Q8WVJ2 157 aa13.71□□□□□ -0.21
USP39-208ENST00000455732 SLC25A46Q96AG3 418 aa13.71□□□□□ -0.21
USP39-208ENST00000455732 PHF21AQ96BD5 680 aa13.71□□□□□ -0.21
USP39-208ENST00000455732 CITED2Q99967 270 aaPredicted RBP13.71□□□□□ -0.21
USP39-208ENST00000455732 MRPS26Q9BYN8 205 aaKnown RBP13.71□□□□□ -0.21
USP39-208ENST00000455732 ZNF221Q9UK13 617 aa13.71□□□□□ -0.21
USP39-208ENST00000455732 IGKV1D-8A0A087WSZ0 117 aa13.7□□□□□ -0.22
USP39-208ENST00000455732 H0YJW9 148 aa13.7□□□□□ -0.22
USP39-208ENST00000455732 GABARAPO95166 117 aa13.7□□□□□ -0.22
USP39-208ENST00000455732 OPN1MWP04001 364 aa13.7□□□□□ -0.22
USP39-208ENST00000455732 OPN1MW2P0DN77 364 aa13.7□□□□□ -0.22
USP39-208ENST00000455732 OPN1MW3P0DN78 364 aa13.7□□□□□ -0.22
USP39-208ENST00000455732 GPR12P47775 334 aa13.7□□□□□ -0.22
USP39-208ENST00000455732 ACTBP60709 375 aa13.7□□□□□ -0.22
USP39-208ENST00000455732 NCS1P62166 190 aa13.7□□□□□ -0.22
USP39-208ENST00000455732 MMDQ15546 238 aa13.7□□□□□ -0.22
USP39-208ENST00000455732 OR5AN1Q8NGI8 311 aa13.7□□□□□ -0.22
USP39-208ENST00000455732 CHPT1Q8WUD6 406 aa13.7□□□□□ -0.22
USP39-208ENST00000455732 KCTD12Q96CX2 325 aaKnown RBP13.7□□□□□ -0.22
USP39-208ENST00000455732 RASL11BQ9BPW5 248 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms