RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 FAM53AQ6NSI3 398 aaPredicted RBP11.57□□□□□ -0.56
HMGXB4-204ENST00000455359 LYSMD2Q8IV50 215 aa11.57□□□□□ -0.56
HMGXB4-204ENST00000455359 LYG1Q8N1E2 194 aa11.57□□□□□ -0.56
HMGXB4-204ENST00000455359 SIGLECL1Q8N7X8 197 aa11.57□□□□□ -0.56
HMGXB4-204ENST00000455359 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.57□□□□□ -0.56
HMGXB4-204ENST00000455359 C17orf50Q8WW18 174 aa11.57□□□□□ -0.56
HMGXB4-204ENST00000455359 TOMM40LQ969M1 308 aa11.57□□□□□ -0.56
HMGXB4-204ENST00000455359 ZNF48Q96MX3 618 aaPredicted RBP11.57□□□□□ -0.56
HMGXB4-204ENST00000455359 S1PR3Q99500 378 aa11.57□□□□□ -0.56
HMGXB4-204ENST00000455359 IFI27L2Q9H2X8 130 aa11.57□□□□□ -0.56
HMGXB4-204ENST00000455359 OR2W1Q9Y3N9 320 aa11.57□□□□□ -0.56
HMGXB4-204ENST00000455359 A0A1W2PPE3 182 aa11.56□□□□□ -0.56
HMGXB4-204ENST00000455359 MEIS3P1A6NDR6 274 aa11.56□□□□□ -0.56
HMGXB4-204ENST00000455359 BTBD17A6NE02 478 aa11.56□□□□□ -0.56
HMGXB4-204ENST00000455359 ZNF736B4DX44 427 aaPredicted RBP11.56□□□□□ -0.56
HMGXB4-204ENST00000455359 HSD17B6O14756 317 aa11.56□□□□□ -0.56
HMGXB4-204ENST00000455359 CSF1P09603 554 aa11.56□□□□□ -0.56
HMGXB4-204ENST00000455359 IER3P46695 156 aa11.56□□□□□ -0.56
HMGXB4-204ENST00000455359 TAS2R19P59542 299 aa11.56□□□□□ -0.56
HMGXB4-204ENST00000455359 DGCR2P98153 550 aa11.56□□□□□ -0.56
HMGXB4-204ENST00000455359 MSMO1Q15800 293 aa11.56□□□□□ -0.56
HMGXB4-204ENST00000455359 VAX1Q5SQQ9 334 aa11.56□□□□□ -0.56
HMGXB4-204ENST00000455359 DHRS11Q6UWP2 260 aa11.56□□□□□ -0.56
HMGXB4-204ENST00000455359 GDPD1Q8N9F7 314 aa11.56□□□□□ -0.56
HMGXB4-204ENST00000455359 TMEM229BQ8NBD8 167 aa11.56□□□□□ -0.56
HMGXB4-204ENST00000455359 DEDD2Q8WXF8 326 aa11.56□□□□□ -0.56
HMGXB4-204ENST00000455359 ABCB10Q9NRK6 738 aa11.56□□□□□ -0.56
HMGXB4-204ENST00000455359 KLK11Q9UBX7 282 aa11.56□□□□□ -0.56
HMGXB4-204ENST00000455359 ZNF221Q9UK13 617 aa11.56□□□□□ -0.56
HMGXB4-204ENST00000455359 HILPDAQ9Y5L2 63 aa11.56□□□□□ -0.56
HMGXB4-204ENST00000455359 SOX21Q9Y651 276 aaPredicted RBP11.56□□□□□ -0.56
HMGXB4-204ENST00000455359 ATRQ13535 2644 aa11.55□□□□□ -0.56
HMGXB4-204ENST00000455359 ST8SIA5O15466 376 aa11.55□□□□□ -0.56
HMGXB4-204ENST00000455359 CD74P04233 296 aa11.55□□□□□ -0.56
HMGXB4-204ENST00000455359 HLA-DMAP28067 261 aa11.55□□□□□ -0.56
HMGXB4-204ENST00000455359 FCGR2CP31995 323 aa11.55□□□□□ -0.56
HMGXB4-204ENST00000455359 HRH1P35367 487 aa11.55□□□□□ -0.56
HMGXB4-204ENST00000455359 LUMP51884 338 aaPredicted RBP11.55□□□□□ -0.56
HMGXB4-204ENST00000455359 BAMBIQ13145 260 aa11.55□□□□□ -0.56
HMGXB4-204ENST00000455359 PLA1AQ53H76 456 aa11.55□□□□□ -0.56
HMGXB4-204ENST00000455359 PYDC2Q56P42 97 aa11.55□□□□□ -0.56
HMGXB4-204ENST00000455359 ZNF833PQ6ZTB9 187 aa11.55□□□□□ -0.56
HMGXB4-204ENST00000455359 THNSL2Q86YJ6 484 aa11.55□□□□□ -0.56
HMGXB4-204ENST00000455359 TGIF2LXQ8IUE1 241 aa11.55□□□□□ -0.56
HMGXB4-204ENST00000455359 ODF3L1Q8IXM7 274 aa11.55□□□□□ -0.56
HMGXB4-204ENST00000455359 Q8N402 240 aa11.55□□□□□ -0.56
HMGXB4-204ENST00000455359 ZFAND2BQ8WV99 257 aa11.55□□□□□ -0.56
HMGXB4-204ENST00000455359 RTN4IP1Q8WWV3 396 aaPredicted RBP11.55□□□□□ -0.56
HMGXB4-204ENST00000455359 THAP7Q9BT49 309 aaPredicted RBP11.55□□□□□ -0.56
HMGXB4-204ENST00000455359 PARP12Q9H0J9 701 aaKnown RBP11.55□□□□□ -0.56
HMGXB4-204ENST00000455359 EHFQ9NZC4 300 aa11.55□□□□□ -0.56
HMGXB4-204ENST00000455359 C2CD3Q4AC94 2353 aa11.55□□□□□ -0.56
HMGXB4-204ENST00000455359 SAA2-SAA4A0A096LPE2 208 aa11.54□□□□□ -0.56
HMGXB4-204ENST00000455359 MDFIC2A0A1B0GVS7 189 aa11.54□□□□□ -0.56
HMGXB4-204ENST00000455359 OR8U9P0C7N5 309 aa11.54□□□□□ -0.56
HMGXB4-204ENST00000455359 SAA2P0DJI9 122 aaPredicted RBP11.54□□□□□ -0.56
HMGXB4-204ENST00000455359 NFYAP23511 347 aaPredicted RBP11.54□□□□□ -0.56
HMGXB4-204ENST00000455359 GPR12P47775 334 aa11.54□□□□□ -0.56
HMGXB4-204ENST00000455359 AP3S2P59780 193 aa11.54□□□□□ -0.56
HMGXB4-204ENST00000455359 HABP2Q14520 560 aaPredicted RBP11.54□□□□□ -0.56
HMGXB4-204ENST00000455359 MEF2DQ14814 521 aa11.54□□□□□ -0.56
HMGXB4-204ENST00000455359 ZNF79Q15937 498 aa11.54□□□□□ -0.56
HMGXB4-204ENST00000455359 RNASE10Q5GAN6 216 aaKnown RBP11.54□□□□□ -0.56
HMGXB4-204ENST00000455359 LIAT1Q6ZQX7 453 aa11.54□□□□□ -0.56
HMGXB4-204ENST00000455359 DYNAPQ8N1N2 210 aa11.54□□□□□ -0.56
HMGXB4-204ENST00000455359 ARRDC1Q8N5I2 433 aa11.54□□□□□ -0.56
HMGXB4-204ENST00000455359 OR6F1Q8NGZ6 308 aa11.54□□□□□ -0.56
HMGXB4-204ENST00000455359 OR8U1Q8NH10 309 aa11.54□□□□□ -0.56
HMGXB4-204ENST00000455359 S100ZQ8WXG8 99 aa11.54□□□□□ -0.56
HMGXB4-204ENST00000455359 BORCS5Q969J3 196 aa11.54□□□□□ -0.56
HMGXB4-204ENST00000455359 SSX3Q99909 188 aa11.54□□□□□ -0.56
HMGXB4-204ENST00000455359 SRRQ9GZT4 340 aa11.54□□□□□ -0.56
HMGXB4-204ENST00000455359 PITPNC1Q9UKF7 332 aa11.54□□□□□ -0.56
HMGXB4-204ENST00000455359 RBM7Q9Y580 266 aaKnown RBP11.54□□□□□ -0.56
HMGXB4-204ENST00000455359 IGHV1-3A0A0C4DH29 117 aa11.53□□□□□ -0.56
HMGXB4-204ENST00000455359 A0A1W2PPI3 338 aa11.53□□□□□ -0.56
HMGXB4-204ENST00000455359 HOXA3O43365 443 aaPredicted RBP11.53□□□□□ -0.56
HMGXB4-204ENST00000455359 PPYP01298 95 aa11.53□□□□□ -0.56
HMGXB4-204ENST00000455359 PMP2P02689 132 aa11.53□□□□□ -0.56
HMGXB4-204ENST00000455359 IFNA6P05013 189 aa11.53□□□□□ -0.56
HMGXB4-204ENST00000455359 FAM106CPP0CH98 169 aa11.53□□□□□ -0.56
HMGXB4-204ENST00000455359 RIPPLY3P57055 190 aa11.53□□□□□ -0.56
HMGXB4-204ENST00000455359 RPL15P61313 204 aaKnown RBP11.53□□□□□ -0.56
HMGXB4-204ENST00000455359 SLC9A3R2Q15599 337 aa11.53□□□□□ -0.56
HMGXB4-204ENST00000455359 ZNF660Q6AZW8 331 aaPredicted RBP11.53□□□□□ -0.56
HMGXB4-204ENST00000455359 TMEM17Q86X19 198 aa11.53□□□□□ -0.56
HMGXB4-204ENST00000455359 ZBTB34Q8NCN2 500 aa11.53□□□□□ -0.56
HMGXB4-204ENST00000455359 ZNF251Q9BRH9 671 aa11.53□□□□□ -0.56
HMGXB4-204ENST00000455359 RAB18Q9NP72 206 aa11.53□□□□□ -0.56
HMGXB4-204ENST00000455359 ANKRD20A5PA0PJZ0 165 aa11.52□□□□□ -0.57
HMGXB4-204ENST00000455359 FAM90A9PA6NNJ1 464 aa11.52□□□□□ -0.57
HMGXB4-204ENST00000455359 TRIM77I1YAP6 450 aa11.52□□□□□ -0.57
HMGXB4-204ENST00000455359 IGHV4-59P01825 116 aa11.52□□□□□ -0.57
HMGXB4-204ENST00000455359 CD3DP04234 171 aa11.52□□□□□ -0.57
HMGXB4-204ENST00000455359 FCER2P06734 321 aa11.52□□□□□ -0.57
HMGXB4-204ENST00000455359 RNASE1P07998 156 aaKnown RBP11.52□□□□□ -0.57
HMGXB4-204ENST00000455359 CD1BP29016 333 aa11.52□□□□□ -0.57
HMGXB4-204ENST00000455359 RFX2P48378 723 aa11.52□□□□□ -0.57
HMGXB4-204ENST00000455359 HERV-K104P61576 105 aa11.52□□□□□ -0.57
HMGXB4-204ENST00000455359 TSPAN5P62079 268 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms