RNA–Protein interactions for RNA: ENST00000454018.6

SYNE1-214, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 1,546 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-214ENST00000454018 MEIS3P1A6NDR6 274 aa7.12□□□□□ -1.27
SYNE1-214ENST00000454018 NPFFO15130 113 aa7.12□□□□□ -1.27
SYNE1-214ENST00000454018 YPEL1O60688 119 aa7.12□□□□□ -1.27
SYNE1-214ENST00000454018 IGLV1-47P01700 117 aa7.12□□□□□ -1.27
SYNE1-214ENST00000454018 ARG1P05089 322 aa7.12□□□□□ -1.27
SYNE1-214ENST00000454018 SCTP09683 121 aa7.12□□□□□ -1.27
SYNE1-214ENST00000454018 IGHV3-43DP0DP04 118 aa7.12□□□□□ -1.27
SYNE1-214ENST00000454018 SAA4P35542 130 aa7.12□□□□□ -1.27
SYNE1-214ENST00000454018 HABP2Q14520 560 aaPredicted RBP7.12□□□□□ -1.27
SYNE1-214ENST00000454018 HLA-DRB5Q30154 266 aa7.12□□□□□ -1.27
SYNE1-214ENST00000454018 TREML4Q6UXN2 200 aa7.12□□□□□ -1.27
SYNE1-214ENST00000454018 IL17RELQ6ZVW7 336 aa7.12□□□□□ -1.27
SYNE1-214ENST00000454018 ABHD12Q8N2K0 398 aa7.12□□□□□ -1.27
SYNE1-214ENST00000454018 GVQW1Q8N7I0 195 aa7.12□□□□□ -1.27
SYNE1-214ENST00000454018 OR10J5Q8NHC4 309 aa7.12□□□□□ -1.27
SYNE1-214ENST00000454018 FAM216AQ8WUB2 273 aa7.12□□□□□ -1.27
SYNE1-214ENST00000454018 CFHR4Q92496 578 aa7.12□□□□□ -1.27
SYNE1-214ENST00000454018 SNAPC3Q92966 411 aa7.12□□□□□ -1.27
SYNE1-214ENST00000454018 CREB3L1Q96BA8 519 aa7.12□□□□□ -1.27
SYNE1-214ENST00000454018 YPEL2Q96QA6 119 aa7.12□□□□□ -1.27
SYNE1-214ENST00000454018 SOSTQ9BQB4 213 aa7.12□□□□□ -1.27
SYNE1-214ENST00000454018 GINS4Q9BRT9 223 aa7.12□□□□□ -1.27
SYNE1-214ENST00000454018 MTFP1Q9UDX5 166 aa7.12□□□□□ -1.27
SYNE1-214ENST00000454018 ZNF107Q9UII5 783 aaPredicted RBP7.12□□□□□ -1.27
SYNE1-214ENST00000454018 AMMECR1Q9Y4X0 333 aaPredicted RBP7.12□□□□□ -1.27
SYNE1-214ENST00000454018 IGHV3OR16-10A0A075B7F0 116 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 TRBV6-7A0A0A0MS04 114 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 IGKV1-6A0A0C4DH72 117 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 J3QR06 171 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 TOR1AO14656 332 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 ITGB1BP1O14713 200 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 BET1O15155 118 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 GSTZ1O43708 216 aaPredicted RBP7.11□□□□□ -1.27
SYNE1-214ENST00000454018 RBBP9O75884 186 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 GSTT2P0CG29 244 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 GSTT2BP0CG30 244 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 TBPP20226 339 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 PPP1CCP36873 323 aaKnown RBP7.11□□□□□ -1.27
SYNE1-214ENST00000454018 GNG10P50151 68 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 RAB7AP51149 207 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 PRRX1P54821 245 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 DGCR2P98153 550 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 ZNF45Q02386 682 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 PRB3Q04118 309 aaPredicted RBP7.11□□□□□ -1.27
SYNE1-214ENST00000454018 GNMTQ14749 295 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 ZNF79Q15937 498 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 MORN2Q502X0 79 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 ACTBL2Q562R1 376 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 IGSF11Q5DX21 431 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 RNASE12Q5GAN4 147 aaKnown RBP7.11□□□□□ -1.27
SYNE1-214ENST00000454018 MINOS1Q5TGZ0 78 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 RUSC1-AS1Q66K80 236 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 BRD3OSQ6XYD6 125 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 SLC25A48Q6ZT89 311 aaKnown RBP7.11□□□□□ -1.27
SYNE1-214ENST00000454018 PDZD9Q8IXQ8 264 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 LINC00311Q8N616 119 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 ZNF439Q8NDP4 499 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 OR2AK2Q8NG84 335 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 OR5AP2Q8NGF4 316 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 OR52L2PQ8NGH6 319 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 OR10V1Q8NGI7 309 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 OR4P4Q8NGL7 312 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 OR52I2Q8NH67 350 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 ABHD14AQ9BUJ0 271 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 MS4A7Q9GZW8 240 aaPredicted RBP7.11□□□□□ -1.27
SYNE1-214ENST00000454018 C11orf54Q9H0W9 315 aaPredicted RBP7.11□□□□□ -1.27
SYNE1-214ENST00000454018 MMP28Q9H239 520 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 NECAP2Q9NVZ3 263 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 OR1A1Q9P1Q5 309 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 PSG11Q9UQ72 335 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 MINOS1-NBL1R4GNA1 71 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 SVEP1Q4LDE5 3571 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 A0A087WWL8 130 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 CRLF1O75462 422 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 CSF1P09603 554 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 FAM157CP0CG43 387 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 IL3RAP26951 378 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 HTR1DP28221 377 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 CEACAM3P40198 252 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 CDK10Q15131 360 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 PYDC2Q56P42 97 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 Q8N402 240 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 OR5H2Q8NGV7 314 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 OR10X1Q8NGY0 326 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 S100ZQ8WXG8 99 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 LEAP2Q969E1 77 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 SRRQ9GZT4 340 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 TOLLIPQ9H0E2 274 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 AKIP1Q9NQ31 210 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 RDH8Q9NYR8 311 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 TAS2R8Q9NYW2 309 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 KLK11Q9UBX7 282 aa7.11□□□□□ -1.27
SYNE1-214ENST00000454018 RBMX2Q9Y388 322 aaKnown RBP7.11□□□□□ -1.27
SYNE1-214ENST00000454018 LEUTXA8MZ59 168 aa7.1□□□□□ -1.27
SYNE1-214ENST00000454018 ZNF736B4DX44 427 aaPredicted RBP7.1□□□□□ -1.27
SYNE1-214ENST00000454018 BUB1B-PAK6H3BSN5 160 aa7.1□□□□□ -1.27
SYNE1-214ENST00000454018 IGHV3-7P01780 117 aa7.1□□□□□ -1.27
SYNE1-214ENST00000454018 FCER2P06734 321 aa7.1□□□□□ -1.27
SYNE1-214ENST00000454018 FBP1P09467 338 aa7.1□□□□□ -1.27
SYNE1-214ENST00000454018 HRH1P35367 487 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms