RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 C1orf50Q9BV19 199 aa2.34□□□□□ -2.03
HMGN3P1-201ENST00000453847 TRIM45Q9H8W5 580 aaPredicted RBP2.34□□□□□ -2.03
HMGN3P1-201ENST00000453847 MARCOQ9UEW3 520 aaPredicted RBP2.34□□□□□ -2.03
HMGN3P1-201ENST00000453847 SLC23A2Q9UGH3 650 aa2.34□□□□□ -2.03
HMGN3P1-201ENST00000453847 COL18A1P39060 1754 aa2.33□□□□□ -2.04
HMGN3P1-201ENST00000453847 D6RAR5 112 aa2.33□□□□□ -2.04
HMGN3P1-201ENST00000453847 KPNA3O00505 521 aaPredicted RBP2.33□□□□□ -2.04
HMGN3P1-201ENST00000453847 DCTN3O75935 186 aa2.33□□□□□ -2.04
HMGN3P1-201ENST00000453847 OPN1SWP03999 348 aa2.33□□□□□ -2.04
HMGN3P1-201ENST00000453847 INAFM2P0DMQ5 153 aa2.33□□□□□ -2.04
HMGN3P1-201ENST00000453847 MYL12AP19105 171 aa2.33□□□□□ -2.04
HMGN3P1-201ENST00000453847 OR1E2P47887 323 aa2.33□□□□□ -2.04
HMGN3P1-201ENST00000453847 FGF12P61328 243 aa2.33□□□□□ -2.04
HMGN3P1-201ENST00000453847 IFITM2Q01629 132 aa2.33□□□□□ -2.04
HMGN3P1-201ENST00000453847 AESQ08117 197 aa2.33□□□□□ -2.04
HMGN3P1-201ENST00000453847 EBPQ15125 230 aaKnown RBP2.33□□□□□ -2.04
HMGN3P1-201ENST00000453847 LY6EQ16553 131 aa2.33□□□□□ -2.04
HMGN3P1-201ENST00000453847 ACSBG2Q5FVE4 666 aa2.33□□□□□ -2.04
HMGN3P1-201ENST00000453847 C10orf91Q5T1B1 145 aa2.33□□□□□ -2.04
HMGN3P1-201ENST00000453847 C1orf194Q5T5A4 169 aa2.33□□□□□ -2.04
HMGN3P1-201ENST00000453847 ZNF550Q7Z398 422 aa2.33□□□□□ -2.04
HMGN3P1-201ENST00000453847 C1orf174Q8IYL3 243 aa2.33□□□□□ -2.04
HMGN3P1-201ENST00000453847 RPRMLQ8N4K4 120 aa2.33□□□□□ -2.04
HMGN3P1-201ENST00000453847 C3orf22Q8N5N4 141 aa2.33□□□□□ -2.04
HMGN3P1-201ENST00000453847 ZFAND2AQ8N6M9 145 aa2.33□□□□□ -2.04
HMGN3P1-201ENST00000453847 PHOSPHO2Q8TCD6 241 aa2.33□□□□□ -2.04
HMGN3P1-201ENST00000453847 ABHD14BQ96IU4 210 aa2.33□□□□□ -2.04
HMGN3P1-201ENST00000453847 EBNA1BP2Q99848 306 aaKnown RBP2.33□□□□□ -2.04
HMGN3P1-201ENST00000453847 SCRT1Q9BWW7 348 aa2.33□□□□□ -2.04
HMGN3P1-201ENST00000453847 KCNIP2Q9NS61 270 aa2.33□□□□□ -2.04
HMGN3P1-201ENST00000453847 SLC22A13Q9Y226 551 aa2.33□□□□□ -2.04
HMGN3P1-201ENST00000453847 PCYT1BQ9Y5K3 369 aaPredicted RBP2.33□□□□□ -2.04
HMGN3P1-201ENST00000453847 TRAPPC1Q9Y5R8 145 aa2.33□□□□□ -2.04
HMGN3P1-201ENST00000453847 TMED7-TICAM2A0A0A6YYA0 188 aa2.32□□□□□ -2.04
HMGN3P1-201ENST00000453847 OR6C70A6NIJ9 312 aa2.32□□□□□ -2.04
HMGN3P1-201ENST00000453847 DEDDO75618 318 aa2.32□□□□□ -2.04
HMGN3P1-201ENST00000453847 RPP14O95059 124 aaKnown RBP2.32□□□□□ -2.04
HMGN3P1-201ENST00000453847 OR10J1P30954 320 aa2.32□□□□□ -2.04
HMGN3P1-201ENST00000453847 MAP2K4P45985 399 aa2.32□□□□□ -2.04
HMGN3P1-201ENST00000453847 KLF3P57682 345 aaPredicted RBP2.32□□□□□ -2.04
HMGN3P1-201ENST00000453847 SNAP25P60880 206 aa2.32□□□□□ -2.04
HMGN3P1-201ENST00000453847 RAB5BP61020 215 aa2.32□□□□□ -2.04
HMGN3P1-201ENST00000453847 CCL7P80098 99 aa2.32□□□□□ -2.04
HMGN3P1-201ENST00000453847 EMX1Q04741 257 aaPredicted RBP2.32□□□□□ -2.04
HMGN3P1-201ENST00000453847 OR8G1Q15617 311 aa2.32□□□□□ -2.04
HMGN3P1-201ENST00000453847 DNLZQ5SXM8 178 aa2.32□□□□□ -2.04
HMGN3P1-201ENST00000453847 N4BP2L1Q5TBK1 243 aaPredicted RBP2.32□□□□□ -2.04
HMGN3P1-201ENST00000453847 TRAPPC5Q8IUR0 188 aa2.32□□□□□ -2.04
HMGN3P1-201ENST00000453847 C1orf158Q8N1D5 194 aa2.32□□□□□ -2.04
HMGN3P1-201ENST00000453847 CD200R1Q8TD46 325 aa2.32□□□□□ -2.04
HMGN3P1-201ENST00000453847 C16orf78Q8WTQ4 265 aa2.32□□□□□ -2.04
HMGN3P1-201ENST00000453847 RMI2Q96E14 147 aa2.32□□□□□ -2.04
HMGN3P1-201ENST00000453847 LINC00477Q96M19 166 aa2.32□□□□□ -2.04
HMGN3P1-201ENST00000453847 ZNF2Q9BSG1 426 aaPredicted RBP2.32□□□□□ -2.04
HMGN3P1-201ENST00000453847 CCDC94Q9BW85 323 aaPredicted RBP2.32□□□□□ -2.04
HMGN3P1-201ENST00000453847 EIF5A2Q9GZV4 153 aaKnown RBP2.32□□□□□ -2.04
HMGN3P1-201ENST00000453847 CACNA1SQ13698 1873 aa2.31□□□□□ -2.04
HMGN3P1-201ENST00000453847 DSCAML1Q8TD84 2053 aa2.31□□□□□ -2.04
HMGN3P1-201ENST00000453847 IGLV2-18A0A075B6J9 118 aa2.31□□□□□ -2.04
HMGN3P1-201ENST00000453847 TRBV24-1A0A075B6N3 115 aa2.31□□□□□ -2.04
HMGN3P1-201ENST00000453847 C5orf49A4QMS7 147 aa2.31□□□□□ -2.04
HMGN3P1-201ENST00000453847 GOLGA6L4A6NEF3 574 aa2.31□□□□□ -2.04
HMGN3P1-201ENST00000453847 PRB2P02812 416 aaPredicted RBP2.31□□□□□ -2.04
HMGN3P1-201ENST00000453847 OPRM1P35372 400 aa2.31□□□□□ -2.04
HMGN3P1-201ENST00000453847 TSPAN31Q12999 210 aa2.31□□□□□ -2.04
HMGN3P1-201ENST00000453847 DHRS2Q13268 280 aa2.31□□□□□ -2.04
HMGN3P1-201ENST00000453847 UAP1Q16222 522 aaPredicted RBP2.31□□□□□ -2.04
HMGN3P1-201ENST00000453847 MAPK14Q16539 360 aa2.31□□□□□ -2.04
HMGN3P1-201ENST00000453847 WDR59Q6PJI9 974 aa2.31□□□□□ -2.04
HMGN3P1-201ENST00000453847 SCXQ7RTU7 201 aa2.31□□□□□ -2.04
HMGN3P1-201ENST00000453847 UBL4BQ8N7F7 174 aa2.31□□□□□ -2.04
HMGN3P1-201ENST00000453847 OR51D1Q8NGF3 324 aa2.31□□□□□ -2.04
HMGN3P1-201ENST00000453847 MFSD8Q8NHS3 518 aa2.31□□□□□ -2.04
HMGN3P1-201ENST00000453847 RNASE6Q93091 150 aaKnown RBP2.31□□□□□ -2.04
HMGN3P1-201ENST00000453847 ANKRD36BP1Q96IX9 119 aa2.31□□□□□ -2.04
HMGN3P1-201ENST00000453847 UPK3BQ9BT76 320 aa2.31□□□□□ -2.04
HMGN3P1-201ENST00000453847 TMEM109Q9BVC6 243 aa2.31□□□□□ -2.04
HMGN3P1-201ENST00000453847 RSPO3Q9BXY4 272 aaPredicted RBP2.31□□□□□ -2.04
HMGN3P1-201ENST00000453847 CYTL1Q9NRR1 136 aa2.31□□□□□ -2.04
HMGN3P1-201ENST00000453847 TAS2R1Q9NYW7 299 aa2.31□□□□□ -2.04
HMGN3P1-201ENST00000453847 DNAJC12Q9UKB3 198 aa2.31□□□□□ -2.04
HMGN3P1-201ENST00000453847 COQ4Q9Y3A0 265 aa2.31□□□□□ -2.04
HMGN3P1-201ENST00000453847 SSH2Q76I76 1423 aa2.31□□□□□ -2.04
HMGN3P1-201ENST00000453847 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.31□□□□□ -2.04
HMGN3P1-201ENST00000453847 GPR179Q6PRD1 2367 aa2.3□□□□□ -2.04
HMGN3P1-201ENST00000453847 TRAV8-1A0A0A6YYK1 113 aa2.3□□□□□ -2.04
HMGN3P1-201ENST00000453847 LINC00862A6NCI5 91 aa2.3□□□□□ -2.04
HMGN3P1-201ENST00000453847 CHP2O43745 196 aa2.3□□□□□ -2.04
HMGN3P1-201ENST00000453847 SH2D1AO60880 128 aa2.3□□□□□ -2.04
HMGN3P1-201ENST00000453847 IGHMP01871 453 aa2.3□□□□□ -2.04
HMGN3P1-201ENST00000453847 IGKV3-11P04433 115 aa2.3□□□□□ -2.04
HMGN3P1-201ENST00000453847 ALOX5APP20292 161 aa2.3□□□□□ -2.04
HMGN3P1-201ENST00000453847 PRPS1L1P21108 318 aa2.3□□□□□ -2.04
HMGN3P1-201ENST00000453847 HSD11B1P28845 292 aa2.3□□□□□ -2.04
HMGN3P1-201ENST00000453847 CAPZBP47756 277 aa2.3□□□□□ -2.04
HMGN3P1-201ENST00000453847 FOXA1P55317 472 aa2.3□□□□□ -2.04
HMGN3P1-201ENST00000453847 REEP5Q00765 189 aa2.3□□□□□ -2.04
HMGN3P1-201ENST00000453847 PRDX4Q13162 271 aa2.3□□□□□ -2.04
HMGN3P1-201ENST00000453847 EIF4EBP2Q13542 120 aaPredicted RBP2.3□□□□□ -2.04
HMGN3P1-201ENST00000453847 SLC9A3R2Q15599 337 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms