RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 MALSU1Q96EH3 234 aa14.54□□□□□ -0.08
SQSTM1-204ENST00000453046 RANBP3Q9H6Z4 567 aaPredicted RBP14.54□□□□□ -0.08
SQSTM1-204ENST00000453046 KIF25Q9UIL4 384 aa14.54□□□□□ -0.08
SQSTM1-204ENST00000453046 LINC00312Q9Y6C7 94 aa14.54□□□□□ -0.08
SQSTM1-204ENST00000453046 SLC6A1P30531 599 aa14.53□□□□□ -0.08
SQSTM1-204ENST00000453046 RFX2P48378 723 aa14.53□□□□□ -0.08
SQSTM1-204ENST00000453046 RAB13P51153 203 aa14.53□□□□□ -0.08
SQSTM1-204ENST00000453046 ARPC4P59998 168 aa14.53□□□□□ -0.08
SQSTM1-204ENST00000453046 AESQ08117 197 aa14.53□□□□□ -0.08
SQSTM1-204ENST00000453046 TRIM16LQ309B1 348 aa14.53□□□□□ -0.08
SQSTM1-204ENST00000453046 ZNF626Q68DY1 528 aa14.53□□□□□ -0.08
SQSTM1-204ENST00000453046 C11orf88Q6PI97 169 aa14.53□□□□□ -0.08
SQSTM1-204ENST00000453046 ARRDC1Q8N5I2 433 aa14.53□□□□□ -0.08
SQSTM1-204ENST00000453046 OR11H6Q8NGC7 330 aa14.53□□□□□ -0.08
SQSTM1-204ENST00000453046 FAM110DQ8TAY7 271 aaPredicted RBP14.53□□□□□ -0.08
SQSTM1-204ENST00000453046 PIFOQ8TCI5 191 aa14.53□□□□□ -0.08
SQSTM1-204ENST00000453046 TINAGL1Q9GZM7 467 aaPredicted RBP14.53□□□□□ -0.08
SQSTM1-204ENST00000453046 MCUBQ9NWR8 336 aa14.53□□□□□ -0.08
SQSTM1-204ENST00000453046 SLC2A8Q9NY64 477 aa14.53□□□□□ -0.08
SQSTM1-204ENST00000453046 COPZ2Q9P299 210 aa14.53□□□□□ -0.08
SQSTM1-204ENST00000453046 TRAPPC2LQ9UL33 140 aa14.53□□□□□ -0.08
SQSTM1-204ENST00000453046 IGKV1D-8A0A087WSZ0 117 aa14.52□□□□□ -0.09
SQSTM1-204ENST00000453046 MEIKINA0A087WXM9 373 aa14.52□□□□□ -0.09
SQSTM1-204ENST00000453046 FAM240BA0A1B0GVZ2 78 aa14.52□□□□□ -0.09
SQSTM1-204ENST00000453046 ODAMA1E959 279 aa14.52□□□□□ -0.09
SQSTM1-204ENST00000453046 VGLL3A8MV65 326 aa14.52□□□□□ -0.09
SQSTM1-204ENST00000453046 ODF3BA8MYP8 253 aa14.52□□□□□ -0.09
SQSTM1-204ENST00000453046 TRDCB7Z8K6 153 aa14.52□□□□□ -0.09
SQSTM1-204ENST00000453046 DISC1C4P0D8 188 aa14.52□□□□□ -0.09
SQSTM1-204ENST00000453046 FABP7O15540 132 aa14.52□□□□□ -0.09
SQSTM1-204ENST00000453046 DIRAS3O95661 229 aa14.52□□□□□ -0.09
SQSTM1-204ENST00000453046 OR3A3P47888 321 aa14.52□□□□□ -0.09
SQSTM1-204ENST00000453046 HERPUD1Q15011 391 aa14.52□□□□□ -0.09
SQSTM1-204ENST00000453046 CDK10Q15131 360 aa14.52□□□□□ -0.09
SQSTM1-204ENST00000453046 HMGN3Q15651 99 aa14.52□□□□□ -0.09
SQSTM1-204ENST00000453046 KIAA2026Q5HYC2 2103 aa14.52□□□□□ -0.09
SQSTM1-204ENST00000453046 FAAP20Q6NZ36 180 aa14.52□□□□□ -0.09
SQSTM1-204ENST00000453046 NRARPQ7Z6K4 114 aa14.52□□□□□ -0.09
SQSTM1-204ENST00000453046 DYNAPQ8N1N2 210 aa14.52□□□□□ -0.09
SQSTM1-204ENST00000453046 OR4D10Q8NGI6 311 aa14.52□□□□□ -0.09
SQSTM1-204ENST00000453046 PRRT1Q99946 306 aa14.52□□□□□ -0.09
SQSTM1-204ENST00000453046 NECAP2Q9NVZ3 263 aa14.52□□□□□ -0.09
SQSTM1-204ENST00000453046 OR6C3Q9NZP0 311 aa14.52□□□□□ -0.09
SQSTM1-204ENST00000453046 PITPNC1Q9UKF7 332 aa14.52□□□□□ -0.09
SQSTM1-204ENST00000453046 SESN1Q9Y6P5 492 aa14.52□□□□□ -0.09
SQSTM1-204ENST00000453046 VWFP04275 2813 aa14.52□□□□□ -0.09
SQSTM1-204ENST00000453046 M0QYG6 137 aa14.51□□□□□ -0.09
SQSTM1-204ENST00000453046 CHST1O43916 411 aa14.51□□□□□ -0.09
SQSTM1-204ENST00000453046 TSPAN15O95858 294 aa14.51□□□□□ -0.09
SQSTM1-204ENST00000453046 AMY2AP04746 511 aa14.51□□□□□ -0.09
SQSTM1-204ENST00000453046 CTXN2P0C2S0 81 aa14.51□□□□□ -0.09
SQSTM1-204ENST00000453046 TCF23Q7RTU1 214 aa14.51□□□□□ -0.09
SQSTM1-204ENST00000453046 CENPSQ8N2Z9 138 aa14.51□□□□□ -0.09
SQSTM1-204ENST00000453046 KLHDC1Q8N7A1 406 aa14.51□□□□□ -0.09
SQSTM1-204ENST00000453046 OR4A4PQ8NGN8 299 aa14.51□□□□□ -0.09
SQSTM1-204ENST00000453046 CABLES2Q9BTV7 478 aa14.51□□□□□ -0.09
SQSTM1-204ENST00000453046 ING3Q9NXR8 418 aa14.51□□□□□ -0.09
SQSTM1-204ENST00000453046 EHFQ9NZC4 300 aa14.51□□□□□ -0.09
SQSTM1-204ENST00000453046 KCNIP1Q9NZI2 227 aa14.51□□□□□ -0.09
SQSTM1-204ENST00000453046 SCP2D1Q9UJQ7 156 aa14.51□□□□□ -0.09
SQSTM1-204ENST00000453046 TCF19Q9Y242 345 aa14.51□□□□□ -0.09
SQSTM1-204ENST00000453046 HILPDAQ9Y5L2 63 aa14.51□□□□□ -0.09
SQSTM1-204ENST00000453046 TRGV10A0A0A0MS01 117 aa14.5□□□□□ -0.09
SQSTM1-204ENST00000453046 IGHV2-26A0A0B4J1V2 119 aa14.5□□□□□ -0.09
SQSTM1-204ENST00000453046 PMP2P02689 132 aa14.5□□□□□ -0.09
SQSTM1-204ENST00000453046 IFNA6P05013 189 aa14.5□□□□□ -0.09
SQSTM1-204ENST00000453046 ZNF735P0CB33 412 aa14.5□□□□□ -0.09
SQSTM1-204ENST00000453046 VSIG10L2P0DP72 767 aa14.5□□□□□ -0.09
SQSTM1-204ENST00000453046 RCC1P18754 421 aaPredicted RBP14.5□□□□□ -0.09
SQSTM1-204ENST00000453046 GLP1RP43220 463 aa14.5□□□□□ -0.09
SQSTM1-204ENST00000453046 GLIPR1P48060 266 aa14.5□□□□□ -0.09
SQSTM1-204ENST00000453046 PDLIM3Q53GG5 364 aaPredicted RBP14.5□□□□□ -0.09
SQSTM1-204ENST00000453046 OVCH2Q7RTZ1 564 aa14.5□□□□□ -0.09
SQSTM1-204ENST00000453046 TMEM17Q86X19 198 aa14.5□□□□□ -0.09
SQSTM1-204ENST00000453046 C11orf44Q8N8P7 122 aa14.5□□□□□ -0.09
SQSTM1-204ENST00000453046 DUSP18Q8NEJ0 188 aa14.5□□□□□ -0.09
SQSTM1-204ENST00000453046 OR56B4Q8NH76 319 aa14.5□□□□□ -0.09
SQSTM1-204ENST00000453046 TMEM133Q9H2Q1 129 aa14.5□□□□□ -0.09
SQSTM1-204ENST00000453046 GAL3ST2Q9H3Q3 398 aa14.5□□□□□ -0.09
SQSTM1-204ENST00000453046 RAB9BQ9NP90 201 aa14.5□□□□□ -0.09
SQSTM1-204ENST00000453046 UBE2J1Q9Y385 318 aaPredicted RBP14.5□□□□□ -0.09
SQSTM1-204ENST00000453046 NPIPB11E5RHQ5 1161 aa14.49□□□□□ -0.09
SQSTM1-204ENST00000453046 F2RL2O00254 374 aa14.49□□□□□ -0.09
SQSTM1-204ENST00000453046 RBMS2Q15434 407 aaKnown RBP14.49□□□□□ -0.09
SQSTM1-204ENST00000453046 ARSJQ5FYB0 599 aaPredicted RBP14.49□□□□□ -0.09
SQSTM1-204ENST00000453046 MINOS1Q5TGZ0 78 aa14.49□□□□□ -0.09
SQSTM1-204ENST00000453046 TMEM219Q86XT9 240 aa14.49□□□□□ -0.09
SQSTM1-204ENST00000453046 OR51S1Q8NGJ8 323 aa14.49□□□□□ -0.09
SQSTM1-204ENST00000453046 OR13A1Q8NGR1 328 aa14.49□□□□□ -0.09
SQSTM1-204ENST00000453046 CCDC107Q8WV48 283 aa14.49□□□□□ -0.09
SQSTM1-204ENST00000453046 CLEC7AQ9BXN2 247 aa14.49□□□□□ -0.09
SQSTM1-204ENST00000453046 MINOS1-NBL1R4GNA1 71 aa14.49□□□□□ -0.09
SQSTM1-204ENST00000453046 A6NDX4 124 aa14.48□□□□□ -0.09
SQSTM1-204ENST00000453046 PEX14O75381 377 aa14.48□□□□□ -0.09
SQSTM1-204ENST00000453046 GSTT2P0CG29 244 aa14.48□□□□□ -0.09
SQSTM1-204ENST00000453046 OR5H8P0DN80 308 aa14.48□□□□□ -0.09
SQSTM1-204ENST00000453046 LDLRAD2Q5SZI1 272 aa14.48□□□□□ -0.09
SQSTM1-204ENST00000453046 PLET1Q6UQ28 207 aa14.48□□□□□ -0.09
SQSTM1-204ENST00000453046 CCBE1Q6UXH8 406 aaPredicted RBP14.48□□□□□ -0.09
SQSTM1-204ENST00000453046 MRGPRDQ8TDS7 321 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms