RNA–Protein interactions for RNA: ENST00000450533.5

TTC3-210, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 2,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-210ENST00000450533 C5orf30Q96GV9 206 aa18.64■□□□□ 0.57
TTC3-210ENST00000450533 OR4C12Q96R67 309 aa18.64■□□□□ 0.57
TTC3-210ENST00000450533 UFSP2Q9NUQ7 469 aa18.64■□□□□ 0.57
TTC3-210ENST00000450533 CLCF1Q9UBD9 225 aa18.64■□□□□ 0.57
TTC3-210ENST00000450533 NKX2-8O15522 239 aa18.63■□□□□ 0.57
TTC3-210ENST00000450533 G6PCP35575 357 aa18.63■□□□□ 0.57
TTC3-210ENST00000450533 HBG1P69891 147 aa18.63■□□□□ 0.57
TTC3-210ENST00000450533 HBG2P69892 147 aa18.63■□□□□ 0.57
TTC3-210ENST00000450533 PRAMEF6Q5VXH4 476 aa18.63■□□□□ 0.57
TTC3-210ENST00000450533 FAM214BQ7L5A3 538 aa18.63■□□□□ 0.57
TTC3-210ENST00000450533 TPRX1Q8N7U7 411 aa18.63■□□□□ 0.57
TTC3-210ENST00000450533 GALMQ96C23 342 aa18.63■□□□□ 0.57
TTC3-210ENST00000450533 METTL1Q9UBP6 276 aaKnown RBP18.63■□□□□ 0.57
TTC3-210ENST00000450533 TMEM30CPA0ZSE6 113 aa18.63■□□□□ 0.57
TTC3-210ENST00000450533 CLDN1O95832 211 aa18.63■□□□□ 0.57
TTC3-210ENST00000450533 IL2RGP31785 369 aa18.63■□□□□ 0.57
TTC3-210ENST00000450533 CD200P41217 278 aa18.63■□□□□ 0.57
TTC3-210ENST00000450533 LRRC75BQ2VPJ9 315 aa18.63■□□□□ 0.57
TTC3-210ENST00000450533 Q6ZR03 302 aa18.63■□□□□ 0.57
TTC3-210ENST00000450533 Q8WTZ3 238 aa18.63■□□□□ 0.57
TTC3-210ENST00000450533 UBE2L5PA0A1B0GUS4 154 aa18.62■□□□□ 0.57
TTC3-210ENST00000450533 VWA1Q6PCB0 445 aa18.62■□□□□ 0.57
TTC3-210ENST00000450533 BTNL3Q6UXE8 466 aa18.62■□□□□ 0.57
TTC3-210ENST00000450533 C11orf53Q8IXP5 236 aa18.62■□□□□ 0.57
TTC3-210ENST00000450533 MRGPRDQ8TDS7 321 aa18.62■□□□□ 0.57
TTC3-210ENST00000450533 RCC1LQ96I51 464 aaKnown RBP18.62■□□□□ 0.57
TTC3-210ENST00000450533 HIPK2Q9H2X6 1198 aa18.62■□□□□ 0.57
TTC3-210ENST00000450533 DOCK11Q5JSL3 2073 aa18.62■□□□□ 0.57
TTC3-210ENST00000450533 TRAV1-1A0A0B4J248 108 aa18.62■□□□□ 0.57
TTC3-210ENST00000450533 CXCL1P09341 107 aa18.62■□□□□ 0.57
TTC3-210ENST00000450533 MAS1LP35410 378 aa18.62■□□□□ 0.57
TTC3-210ENST00000450533 Q6ZT83 130 aa18.62■□□□□ 0.57
TTC3-210ENST00000450533 ZNF645Q8N7E2 425 aa18.62■□□□□ 0.57
TTC3-210ENST00000450533 RBKSQ9H477 322 aa18.62■□□□□ 0.57
TTC3-210ENST00000450533 IFNA17P01571 189 aa18.61■□□□□ 0.57
TTC3-210ENST00000450533 HBZP02008 142 aa18.61■□□□□ 0.57
TTC3-210ENST00000450533 GABRA2P47869 451 aa18.61■□□□□ 0.57
TTC3-210ENST00000450533 ERVFRD-1P60508 538 aa18.61■□□□□ 0.57
TTC3-210ENST00000450533 ELOBQ15370 118 aa18.61■□□□□ 0.57
TTC3-210ENST00000450533 INO80CQ6PI98 192 aaPredicted RBP18.61■□□□□ 0.57
TTC3-210ENST00000450533 FIP1L1Q6UN15 594 aaKnown RBP18.61■□□□□ 0.57
TTC3-210ENST00000450533 WDR61Q9GZS3 305 aaKnown RBP18.61■□□□□ 0.57
TTC3-210ENST00000450533 HES4Q9HCC6 221 aa18.61■□□□□ 0.57
TTC3-210ENST00000450533 MSL2Q9HCI7 577 aa18.61■□□□□ 0.57
TTC3-210ENST00000450533 LINC00205P59089 165 aa18.61■□□□□ 0.57
TTC3-210ENST00000450533 SLC38A11Q08AI6 406 aa18.61■□□□□ 0.57
TTC3-210ENST00000450533 NCMAPQ5T1S8 102 aa18.61■□□□□ 0.57
TTC3-210ENST00000450533 FDCSPQ8NFU4 85 aa18.61■□□□□ 0.57
TTC3-210ENST00000450533 METRNQ9UJH8 293 aa18.61■□□□□ 0.57
TTC3-210ENST00000450533 BOD1L1Q8NFC6 3051 aa18.61■□□□□ 0.57
TTC3-210ENST00000450533 TMEM210A6NLX4 147 aa18.6■□□□□ 0.57
TTC3-210ENST00000450533 RNF212BA8MTL3 300 aa18.6■□□□□ 0.57
TTC3-210ENST00000450533 S100A8P05109 93 aa18.6■□□□□ 0.57
TTC3-210ENST00000450533 S100A9P06702 114 aaKnown RBP18.6■□□□□ 0.57
TTC3-210ENST00000450533 CD55P08174 381 aa18.6■□□□□ 0.57
TTC3-210ENST00000450533 BCL2P10415 239 aa18.6■□□□□ 0.57
TTC3-210ENST00000450533 FABP6P51161 128 aa18.6■□□□□ 0.57
TTC3-210ENST00000450533 RPS16P62249 146 aaKnown RBP18.6■□□□□ 0.57
TTC3-210ENST00000450533 TNFRSF9Q07011 255 aa18.6■□□□□ 0.57
TTC3-210ENST00000450533 COQ2Q96H96 371 aa18.6■□□□□ 0.57
TTC3-210ENST00000450533 SVILO95425 2214 aa18.6■□□□□ 0.57
TTC3-210ENST00000450533 AP4M1O00189 453 aa18.6■□□□□ 0.57
TTC3-210ENST00000450533 FAM90A2PQ658T7 463 aa18.6■□□□□ 0.57
TTC3-210ENST00000450533 PSMG3Q9BT73 122 aaPredicted RBP18.6■□□□□ 0.57
TTC3-210ENST00000450533 CLN8Q9UBY8 286 aa18.6■□□□□ 0.57
TTC3-210ENST00000450533 A0A087WWC5 75 aa18.59■□□□□ 0.57
TTC3-210ENST00000450533 TGIF2-C20orf24A0A0A6YYL0 155 aa18.59■□□□□ 0.57
TTC3-210ENST00000450533 IGHV3-43A0A0B4J1X8 118 aa18.59■□□□□ 0.57
TTC3-210ENST00000450533 S1PR2O95136 353 aa18.59■□□□□ 0.57
TTC3-210ENST00000450533 PTBP3O95758 552 aaKnown RBP18.59■□□□□ 0.57
TTC3-210ENST00000450533 IGHV3-43DP0DP04 118 aa18.59■□□□□ 0.57
TTC3-210ENST00000450533 BEND4Q6ZU67 534 aa18.59■□□□□ 0.57
TTC3-210ENST00000450533 C17orf98A8MV24 154 aa18.59■□□□□ 0.57
TTC3-210ENST00000450533 PPIHO43447 177 aaKnown RBP18.59■□□□□ 0.57
TTC3-210ENST00000450533 TIMM8AO60220 97 aaPredicted RBP18.59■□□□□ 0.57
TTC3-210ENST00000450533 SMIM6P0DI80 62 aa18.59■□□□□ 0.57
TTC3-210ENST00000450533 HOXC12P31275 282 aa18.59■□□□□ 0.57
TTC3-210ENST00000450533 SSTR5P35346 364 aa18.59■□□□□ 0.57
TTC3-210ENST00000450533 TLE1Q04724 770 aa18.59■□□□□ 0.57
TTC3-210ENST00000450533 TRIP6Q15654 476 aaKnown RBP18.59■□□□□ 0.57
TTC3-210ENST00000450533 SLC35E3Q7Z769 313 aa18.59■□□□□ 0.57
TTC3-210ENST00000450533 RFESDQ8TAC1 157 aa18.59■□□□□ 0.57
TTC3-210ENST00000450533 KIR2DL2P43627 348 aaPredicted RBP18.58■□□□□ 0.57
TTC3-210ENST00000450533 GLIPR1P48060 266 aa18.58■□□□□ 0.57
TTC3-210ENST00000450533 BRWD1-AS2P59051 145 aa18.58■□□□□ 0.57
TTC3-210ENST00000450533 KIAA0141Q14154 515 aaPredicted RBP18.58■□□□□ 0.57
TTC3-210ENST00000450533 WDR31Q8NA23 367 aa18.58■□□□□ 0.57
TTC3-210ENST00000450533 C9orf106Q8NAJ2 232 aa18.58■□□□□ 0.57
TTC3-210ENST00000450533 TCTEX1D2Q8WW35 142 aa18.58■□□□□ 0.57
TTC3-210ENST00000450533 MBD3L1Q8WWY6 194 aa18.58■□□□□ 0.57
TTC3-210ENST00000450533 TAF15Q92804 592 aaKnown RBP eCLIP18.58■□□□□ 0.571e-9■■■■□ 23
TTC3-210ENST00000450533 SEBOXQ9HB31 216 aaPredicted RBP18.58■□□□□ 0.57
TTC3-210ENST00000450533 CISD1Q9NZ45 108 aaKnown RBP18.58■□□□□ 0.57
TTC3-210ENST00000450533 OOEPA6NGQ2 149 aa18.58■□□□□ 0.56
TTC3-210ENST00000450533 DEFB108AA8MXU0 73 aa18.58■□□□□ 0.56
TTC3-210ENST00000450533 HMGB3O15347 200 aaKnown RBP18.58■□□□□ 0.56
TTC3-210ENST00000450533 CLN5O75503 358 aa18.58■□□□□ 0.56
TTC3-210ENST00000450533 FOXF2Q12947 444 aa18.58■□□□□ 0.56
TTC3-210ENST00000450533 ZNF674Q2M3X9 581 aa18.58■□□□□ 0.56
TTC3-210ENST00000450533 WDR82Q6UXN9 313 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms