RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 AKAIN1P0CW23 69 aa13.82□□□□□ -0.2
PRPF40A-204ENST00000450303 CCR6P51684 374 aa13.82□□□□□ -0.2
PRPF40A-204ENST00000450303 KRTAP10-3P60369 221 aa13.82□□□□□ -0.2
PRPF40A-204ENST00000450303 PRR31Q5SQ13 230 aa13.82□□□□□ -0.2
PRPF40A-204ENST00000450303 Q6ZS49 121 aa13.82□□□□□ -0.2
PRPF40A-204ENST00000450303 Q6ZSV7 163 aa13.82□□□□□ -0.2
PRPF40A-204ENST00000450303 NOXA1Q86UR1 476 aa13.82□□□□□ -0.2
PRPF40A-204ENST00000450303 HOGA1Q86XE5 327 aa13.82□□□□□ -0.2
PRPF40A-204ENST00000450303 OR13A1Q8NGR1 328 aa13.82□□□□□ -0.2
PRPF40A-204ENST00000450303 AJUBAQ96IF1 538 aa13.82□□□□□ -0.2
PRPF40A-204ENST00000450303 ZNF714Q96N38 554 aa13.82□□□□□ -0.2
PRPF40A-204ENST00000450303 C20orf85Q9H1P6 137 aa13.82□□□□□ -0.2
PRPF40A-204ENST00000450303 HEXA-AS1Q9H8Q6 139 aa13.82□□□□□ -0.2
PRPF40A-204ENST00000450303 RANGRFQ9HD47 186 aaPredicted RBP13.82□□□□□ -0.2
PRPF40A-204ENST00000450303 VPREB3Q9UKI3 123 aa13.82□□□□□ -0.2
PRPF40A-204ENST00000450303 RNF114Q9Y508 228 aa13.82□□□□□ -0.2
PRPF40A-204ENST00000450303 KIAA2026Q5HYC2 2103 aa13.82□□□□□ -0.2
PRPF40A-204ENST00000450303 PKD1L1Q8TDX9 2849 aa13.81□□□□□ -0.2
PRPF40A-204ENST00000450303 TRDCB7Z8K6 153 aa13.81□□□□□ -0.2
PRPF40A-204ENST00000450303 H3BUX3 64 aa13.81□□□□□ -0.2
PRPF40A-204ENST00000450303 ZNF728P0DKX0 622 aa13.81□□□□□ -0.2
PRPF40A-204ENST00000450303 RCC1P18754 421 aaPredicted RBP13.81□□□□□ -0.2
PRPF40A-204ENST00000450303 TAS2R19P59542 299 aa13.81□□□□□ -0.2
PRPF40A-204ENST00000450303 RPL15P61313 204 aaKnown RBP13.81□□□□□ -0.2
PRPF40A-204ENST00000450303 HLA-DRB3P79483 266 aa13.81□□□□□ -0.2
PRPF40A-204ENST00000450303 LY6EQ16553 131 aa13.81□□□□□ -0.2
PRPF40A-204ENST00000450303 DHRS7BQ6IAN0 325 aaPredicted RBP13.81□□□□□ -0.2
PRPF40A-204ENST00000450303 BEND2Q8NDZ0 799 aa13.81□□□□□ -0.2
PRPF40A-204ENST00000450303 BEST4Q8NFU0 473 aa13.81□□□□□ -0.2
PRPF40A-204ENST00000450303 CAPSLQ8WWF8 208 aa13.81□□□□□ -0.2
PRPF40A-204ENST00000450303 ARL11Q969Q4 196 aa13.81□□□□□ -0.2
PRPF40A-204ENST00000450303 SSX3Q99909 188 aa13.81□□□□□ -0.2
PRPF40A-204ENST00000450303 TAF9BQ9HBM6 251 aa13.81□□□□□ -0.2
PRPF40A-204ENST00000450303 KLK11Q9UBX7 282 aa13.81□□□□□ -0.2
PRPF40A-204ENST00000450303 ZNF230Q9UIE0 474 aaPredicted RBP13.81□□□□□ -0.2
PRPF40A-204ENST00000450303 MGAM2Q2M2H8 2515 aa13.8□□□□□ -0.2
PRPF40A-204ENST00000450303 TRAV39A0A0B4J263 110 aa13.8□□□□□ -0.2
PRPF40A-204ENST00000450303 KBTBD11-OT1A0A1B0GTJ5 212 aa13.8□□□□□ -0.2
PRPF40A-204ENST00000450303 FAM172BPA6NC97 362 aa13.8□□□□□ -0.2
PRPF40A-204ENST00000450303 SSNA1O43805 119 aa13.8□□□□□ -0.2
PRPF40A-204ENST00000450303 C1QBP02746 253 aa13.8□□□□□ -0.2
PRPF40A-204ENST00000450303 CTXN2P0C2S0 81 aa13.8□□□□□ -0.2
PRPF40A-204ENST00000450303 DLX6P56179 175 aa13.8□□□□□ -0.2
PRPF40A-204ENST00000450303 ARPC4P59998 168 aa13.8□□□□□ -0.2
PRPF40A-204ENST00000450303 HMGN3Q15651 99 aa13.8□□□□□ -0.2
PRPF40A-204ENST00000450303 TMEM30BQ3MIR4 351 aa13.8□□□□□ -0.2
PRPF40A-204ENST00000450303 MIDNQ504T8 468 aa13.8□□□□□ -0.2
PRPF40A-204ENST00000450303 GVQW1Q8N7I0 195 aa13.8□□□□□ -0.2
PRPF40A-204ENST00000450303 OR10A7Q8NGE5 316 aa13.8□□□□□ -0.2
PRPF40A-204ENST00000450303 OR4A4PQ8NGN8 299 aa13.8□□□□□ -0.2
PRPF40A-204ENST00000450303 GIMAP1Q8WWP7 306 aa13.8□□□□□ -0.2
PRPF40A-204ENST00000450303 GALMQ96C23 342 aa13.8□□□□□ -0.2
PRPF40A-204ENST00000450303 CYYR1Q96J86 154 aa13.8□□□□□ -0.2
PRPF40A-204ENST00000450303 GHITMQ9H3K2 345 aa13.8□□□□□ -0.2
PRPF40A-204ENST00000450303 CALYQ9NYX4 217 aa13.8□□□□□ -0.2
PRPF40A-204ENST00000450303 C17orf98A8MV24 154 aa13.79□□□□□ -0.2
PRPF40A-204ENST00000450303 FABP7O15540 132 aa13.79□□□□□ -0.2
PRPF40A-204ENST00000450303 ANXA3P12429 323 aa13.79□□□□□ -0.2
PRPF40A-204ENST00000450303 NAT1P18440 290 aa13.79□□□□□ -0.2
PRPF40A-204ENST00000450303 OR3A3P47888 321 aa13.79□□□□□ -0.2
PRPF40A-204ENST00000450303 LGALS4P56470 323 aa13.79□□□□□ -0.2
PRPF40A-204ENST00000450303 TAS2R46P59540 309 aa13.79□□□□□ -0.2
PRPF40A-204ENST00000450303 RBMS2Q15434 407 aaKnown RBP13.79□□□□□ -0.2
PRPF40A-204ENST00000450303 ACTBL2Q562R1 376 aa13.79□□□□□ -0.2
PRPF40A-204ENST00000450303 LHFPL4Q7Z7J7 247 aa13.79□□□□□ -0.2
PRPF40A-204ENST00000450303 PRR18Q8N4B5 295 aa13.79□□□□□ -0.2
PRPF40A-204ENST00000450303 TMEM229BQ8NBD8 167 aa13.79□□□□□ -0.2
PRPF40A-204ENST00000450303 OR5R1Q8NH85 324 aa13.79□□□□□ -0.2
PRPF40A-204ENST00000450303 MAFIPQ8WZ33 124 aa13.79□□□□□ -0.2
PRPF40A-204ENST00000450303 ANXA10Q9UJ72 324 aa13.79□□□□□ -0.2
PRPF40A-204ENST00000450303 ANAPC10Q9UM13 185 aa13.79□□□□□ -0.2
PRPF40A-204ENST00000450303 ZNF736B4DX44 427 aaPredicted RBP13.78□□□□□ -0.2
PRPF40A-204ENST00000450303 C12orf77C9JDV5 145 aa13.78□□□□□ -0.2
PRPF40A-204ENST00000450303 NDUFB6O95139 128 aa13.78□□□□□ -0.2
PRPF40A-204ENST00000450303 HBZP02008 142 aa13.78□□□□□ -0.2
PRPF40A-204ENST00000450303 RBP4P02753 201 aa13.78□□□□□ -0.2
PRPF40A-204ENST00000450303 IL5P05113 134 aa13.78□□□□□ -0.2
PRPF40A-204ENST00000450303 CGB3P0DN86 165 aa13.78□□□□□ -0.2
PRPF40A-204ENST00000450303 CGB7P0DN87 165 aa13.78□□□□□ -0.2
PRPF40A-204ENST00000450303 TBPP20226 339 aa13.78□□□□□ -0.2
PRPF40A-204ENST00000450303 NKX2-5P52952 324 aaPredicted RBP13.78□□□□□ -0.2
PRPF40A-204ENST00000450303 PROK1P58294 105 aa13.78□□□□□ -0.2
PRPF40A-204ENST00000450303 NDUFA5Q16718 116 aa13.78□□□□□ -0.2
PRPF40A-204ENST00000450303 OR52W1Q6IF63 320 aa13.78□□□□□ -0.2
PRPF40A-204ENST00000450303 TREML4Q6UXN2 200 aa13.78□□□□□ -0.2
PRPF40A-204ENST00000450303 TCF23Q7RTU1 214 aa13.78□□□□□ -0.2
PRPF40A-204ENST00000450303 OR5AP2Q8NGF4 316 aa13.78□□□□□ -0.2
PRPF40A-204ENST00000450303 OR5H2Q8NGV7 314 aa13.78□□□□□ -0.2
PRPF40A-204ENST00000450303 CITED1Q99966 193 aa13.78□□□□□ -0.2
PRPF40A-204ENST00000450303 MEGF9Q9H1U4 602 aa13.78□□□□□ -0.2
PRPF40A-204ENST00000450303 IDI2-AS1Q9NZ38 188 aa13.78□□□□□ -0.2
PRPF40A-204ENST00000450303 NPIPB11E5RHQ5 1161 aa13.77□□□□□ -0.21
PRPF40A-204ENST00000450303 ARPC1BO15143 372 aaKnown RBP13.77□□□□□ -0.21
PRPF40A-204ENST00000450303 DIRAS3O95661 229 aa13.77□□□□□ -0.21
PRPF40A-204ENST00000450303 ARG1P05089 322 aa13.77□□□□□ -0.21
PRPF40A-204ENST00000450303 SCTP09683 121 aa13.77□□□□□ -0.21
PRPF40A-204ENST00000450303 GSTT2P0CG29 244 aa13.77□□□□□ -0.21
PRPF40A-204ENST00000450303 SSTR5P35346 364 aa13.77□□□□□ -0.21
PRPF40A-204ENST00000450303 HTD2P86397 168 aa13.77□□□□□ -0.21
PRPF40A-204ENST00000450303 MEF2DQ14814 521 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms