RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 TMEM95Q3KNT9 176 aa7.35□□□□□ -1.23
LSM5-208ENST00000450169 STUMQ69YW2 141 aa7.35□□□□□ -1.23
LSM5-208ENST00000450169 FAM71F2Q6NXP2 309 aa7.35□□□□□ -1.23
LSM5-208ENST00000450169 OR10V1Q8NGI7 309 aa7.35□□□□□ -1.23
LSM5-208ENST00000450169 OR10G6Q8NH81 332 aa7.35□□□□□ -1.23
LSM5-208ENST00000450169 ZNF721Q8TF20 911 aa7.35□□□□□ -1.23
LSM5-208ENST00000450169 PIGTQ969N2 578 aa7.35□□□□□ -1.23
LSM5-208ENST00000450169 GP6Q9HCN6 339 aa7.35□□□□□ -1.23
LSM5-208ENST00000450169 MED29Q9NX70 200 aa7.35□□□□□ -1.23
LSM5-208ENST00000450169 TRAV9-1A0A075B6T8 112 aa7.34□□□□□ -1.23
LSM5-208ENST00000450169 UBE2L5PA0A1B0GUS4 154 aa7.34□□□□□ -1.23
LSM5-208ENST00000450169 A0A1W2PS18 150 aa7.34□□□□□ -1.23
LSM5-208ENST00000450169 RBFOX2O43251 390 aaKnown RBP eCLIP7.34□□□□□ -1.23
LSM5-208ENST00000450169 EML2O95834 649 aa7.34□□□□□ -1.23
LSM5-208ENST00000450169 CISD3P0C7P0 127 aa7.34□□□□□ -1.23
LSM5-208ENST00000450169 PVRP15151 417 aa7.34□□□□□ -1.23
LSM5-208ENST00000450169 PGCP20142 388 aa7.34□□□□□ -1.23
LSM5-208ENST00000450169 WASP42768 502 aa7.34□□□□□ -1.23
LSM5-208ENST00000450169 ARL4DP49703 201 aa7.34□□□□□ -1.23
LSM5-208ENST00000450169 RPS18P62269 152 aaKnown RBP7.34□□□□□ -1.23
LSM5-208ENST00000450169 PRTGQ2VWP7 1150 aa7.34□□□□□ -1.23
LSM5-208ENST00000450169 HLA-DRB5Q30154 266 aa7.34□□□□□ -1.23
LSM5-208ENST00000450169 TMEM108Q6UXF1 575 aa7.34□□□□□ -1.23
LSM5-208ENST00000450169 ASCL4Q6XD76 172 aa7.34□□□□□ -1.23
LSM5-208ENST00000450169 HAPLN4Q86UW8 402 aa7.34□□□□□ -1.23
LSM5-208ENST00000450169 OR4S2Q8NH73 311 aa7.34□□□□□ -1.23
LSM5-208ENST00000450169 TAF15Q92804 592 aaKnown RBP eCLIP7.34□□□□□ -1.23
LSM5-208ENST00000450169 C1orf159Q96HA4 380 aa7.34□□□□□ -1.23
LSM5-208ENST00000450169 GMPPAQ96IJ6 420 aaPredicted RBP7.34□□□□□ -1.23
LSM5-208ENST00000450169 GPHA2Q96T91 129 aa7.34□□□□□ -1.23
LSM5-208ENST00000450169 MDFIQ99750 246 aa7.34□□□□□ -1.23
LSM5-208ENST00000450169 MTIF3Q9H2K0 278 aaKnown RBP7.34□□□□□ -1.23
LSM5-208ENST00000450169 CLEC1BQ9P126 229 aa7.34□□□□□ -1.23
LSM5-208ENST00000450169 SAA2-SAA4A0A096LPE2 208 aa7.34□□□□□ -1.24
LSM5-208ENST00000450169 PGPEP1LA6NFU8 196 aa7.34□□□□□ -1.24
LSM5-208ENST00000450169 PRRT4C9JH25 899 aa7.34□□□□□ -1.24
LSM5-208ENST00000450169 MS4A18H0YCH9 400 aa7.34□□□□□ -1.24
LSM5-208ENST00000450169 PDE6DO43924 150 aa7.34□□□□□ -1.24
LSM5-208ENST00000450169 RAMP3O60896 148 aa7.34□□□□□ -1.24
LSM5-208ENST00000450169 ZNF324O75467 553 aaPredicted RBP7.34□□□□□ -1.24
LSM5-208ENST00000450169 EGR1P18146 543 aa7.34□□□□□ -1.24
LSM5-208ENST00000450169 PLA2G5P39877 138 aa7.34□□□□□ -1.24
LSM5-208ENST00000450169 ZNF83P51522 516 aa7.34□□□□□ -1.24
LSM5-208ENST00000450169 MS4A18Q3C1V0 323 aa7.34□□□□□ -1.24
LSM5-208ENST00000450169 MPV17L2Q567V2 206 aa7.34□□□□□ -1.24
LSM5-208ENST00000450169 TCF24Q7RTU0 167 aa7.34□□□□□ -1.24
LSM5-208ENST00000450169 WDR5BQ86VZ2 330 aa7.34□□□□□ -1.24
LSM5-208ENST00000450169 ZNF114Q8NC26 417 aa7.34□□□□□ -1.24
LSM5-208ENST00000450169 WFDC12Q8WWY7 111 aa7.34□□□□□ -1.24
LSM5-208ENST00000450169 ELSPBP1Q96BH3 223 aa7.34□□□□□ -1.24
LSM5-208ENST00000450169 SARAFQ96BY9 339 aa7.34□□□□□ -1.24
LSM5-208ENST00000450169 ZNF501Q96CX3 271 aaPredicted RBP7.34□□□□□ -1.24
LSM5-208ENST00000450169 OR4C12Q96R67 309 aa7.34□□□□□ -1.24
LSM5-208ENST00000450169 HDAC8Q9BY41 377 aa7.34□□□□□ -1.24
LSM5-208ENST00000450169 TBC1D29Q9UFV1 150 aa7.34□□□□□ -1.24
LSM5-208ENST00000450169 SHANK1Q9Y566 2161 aa7.33□□□□□ -1.24
LSM5-208ENST00000450169 TRAV9-2A0A087WT02 112 aa7.33□□□□□ -1.24
LSM5-208ENST00000450169 A0A1W2PR80 420 aa7.33□□□□□ -1.24
LSM5-208ENST00000450169 SNURFLB1AK76 121 aa7.33□□□□□ -1.24
LSM5-208ENST00000450169 C9orf172C9J069 976 aa7.33□□□□□ -1.24
LSM5-208ENST00000450169 E9PLN8 166 aa7.33□□□□□ -1.24
LSM5-208ENST00000450169 H0YIG0 161 aa7.33□□□□□ -1.24
LSM5-208ENST00000450169 OR7C2O60412 319 aa7.33□□□□□ -1.24
LSM5-208ENST00000450169 REG1AP05451 166 aa7.33□□□□□ -1.24
LSM5-208ENST00000450169 IER3P46695 156 aa7.33□□□□□ -1.24
LSM5-208ENST00000450169 CLDN15P56746 228 aa7.33□□□□□ -1.24
LSM5-208ENST00000450169 GNB1P62873 340 aa7.33□□□□□ -1.24
LSM5-208ENST00000450169 PAX2Q02962 417 aa7.33□□□□□ -1.24
LSM5-208ENST00000450169 RBPJQ06330 500 aa7.33□□□□□ -1.24
LSM5-208ENST00000450169 RNPS1Q15287 305 aaKnown RBP7.33□□□□□ -1.24
LSM5-208ENST00000450169 KRTCAP3Q53RY4 240 aa7.33□□□□□ -1.24
LSM5-208ENST00000450169 OR10J3Q5JRS4 329 aa7.33□□□□□ -1.24
LSM5-208ENST00000450169 ACSM6Q6P461 480 aa7.33□□□□□ -1.24
LSM5-208ENST00000450169 ZNF818PQ6ZRF7 136 aa7.33□□□□□ -1.24
LSM5-208ENST00000450169 C19orf35Q6ZS72 473 aa7.33□□□□□ -1.24
LSM5-208ENST00000450169 VASH2Q86V25 355 aa7.33□□□□□ -1.24
LSM5-208ENST00000450169 GAPTQ8N292 157 aa7.33□□□□□ -1.24
LSM5-208ENST00000450169 DEFB125Q8N687 156 aa7.33□□□□□ -1.24
LSM5-208ENST00000450169 OR5D13Q8NGL4 314 aa7.33□□□□□ -1.24
LSM5-208ENST00000450169 PP6455Q8WZ26 134 aa7.33□□□□□ -1.24
LSM5-208ENST00000450169 BORCS7Q96B45 105 aa7.33□□□□□ -1.24
LSM5-208ENST00000450169 RCHY1Q96PM5 261 aa7.33□□□□□ -1.24
LSM5-208ENST00000450169 DERL1Q9BUN8 251 aa7.33□□□□□ -1.24
LSM5-208ENST00000450169 NXF5Q9H1B4 397 aaKnown RBP7.33□□□□□ -1.24
LSM5-208ENST00000450169 SLC7A10Q9NS82 523 aa7.33□□□□□ -1.24
LSM5-208ENST00000450169 PSENENQ9NZ42 101 aa7.33□□□□□ -1.24
LSM5-208ENST00000450169 SLC17A4Q9Y2C5 497 aa7.33□□□□□ -1.24
LSM5-208ENST00000450169 TIMM9Q9Y5J7 89 aa7.33□□□□□ -1.24
LSM5-208ENST00000450169 C5orf63A6NC05 138 aa7.32□□□□□ -1.24
LSM5-208ENST00000450169 G3V4G9 280 aa7.32□□□□□ -1.24
LSM5-208ENST00000450169 RER1O15258 196 aa7.32□□□□□ -1.24
LSM5-208ENST00000450169 ANGPTL7O43827 346 aa7.32□□□□□ -1.24
LSM5-208ENST00000450169 NDUFB4O95168 129 aa7.32□□□□□ -1.24
LSM5-208ENST00000450169 CA2P00918 260 aa7.32□□□□□ -1.24
LSM5-208ENST00000450169 CLPSP04118 112 aa7.32□□□□□ -1.24
LSM5-208ENST00000450169 IAPPP10997 89 aa7.32□□□□□ -1.24
LSM5-208ENST00000450169 HNRNPA2B1P22626 353 aaKnown RBP7.32□□□□□ -1.24
LSM5-208ENST00000450169 TIMP3P35625 211 aa7.32□□□□□ -1.24
LSM5-208ENST00000450169 LGALS7P47929 136 aa7.32□□□□□ -1.24
LSM5-208ENST00000450169 IGLV3-21P80748 117 aaPredicted RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms