RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 J3QR06 171 aa15.73■□□□□ 0.11
RPS28-202ENST00000449223 SLC31A2O15432 143 aa15.73■□□□□ 0.11
RPS28-202ENST00000449223 ST8SIA5O15466 376 aa15.73■□□□□ 0.11
RPS28-202ENST00000449223 IGLV1-47P01700 117 aa15.73■□□□□ 0.11
RPS28-202ENST00000449223 OR4E1P0C645 316 aa15.73■□□□□ 0.11
RPS28-202ENST00000449223 VSIG10L2P0DP72 767 aa15.73■□□□□ 0.11
RPS28-202ENST00000449223 PI3P19957 117 aa15.73■□□□□ 0.11
RPS28-202ENST00000449223 PIGPP57054 158 aa15.73■□□□□ 0.11
RPS28-202ENST00000449223 RAB25P57735 213 aa15.73■□□□□ 0.11
RPS28-202ENST00000449223 PAX8Q06710 450 aa15.73■□□□□ 0.11
RPS28-202ENST00000449223 EIF4EBP1Q13541 118 aaPredicted RBP15.73■□□□□ 0.11
RPS28-202ENST00000449223 METTL11BQ5VVY1 283 aa15.73■□□□□ 0.11
RPS28-202ENST00000449223 CMTM1Q8IZ96 169 aa15.73■□□□□ 0.11
RPS28-202ENST00000449223 ADAD2Q8NCV1 583 aaKnown RBP15.73■□□□□ 0.11
RPS28-202ENST00000449223 BEND2Q8NDZ0 799 aa15.73■□□□□ 0.11
RPS28-202ENST00000449223 OR11H6Q8NGC7 330 aa15.73■□□□□ 0.11
RPS28-202ENST00000449223 LEAP2Q969E1 77 aa15.73■□□□□ 0.11
RPS28-202ENST00000449223 RBM7Q9Y580 266 aaKnown RBP15.73■□□□□ 0.11
RPS28-202ENST00000449223 TRAV20A0A0B4J274 112 aa15.73■□□□□ 0.11
RPS28-202ENST00000449223 CRYM-AS1A6NIL9 109 aa15.73■□□□□ 0.11
RPS28-202ENST00000449223 GATA3P23771 443 aa15.73■□□□□ 0.11
RPS28-202ENST00000449223 ZNF137PP52743 207 aa15.73■□□□□ 0.11
RPS28-202ENST00000449223 ODF3L1Q8IXM7 274 aa15.73■□□□□ 0.11
RPS28-202ENST00000449223 ABHD12Q8N2K0 398 aa15.73■□□□□ 0.11
RPS28-202ENST00000449223 DRAM1Q8N682 238 aa15.73■□□□□ 0.11
RPS28-202ENST00000449223 LINC01356Q8N9X3 169 aa15.73■□□□□ 0.11
RPS28-202ENST00000449223 CCDC71LQ8N9Z2 235 aa15.73■□□□□ 0.11
RPS28-202ENST00000449223 WFDC11Q8NEX6 87 aa15.73■□□□□ 0.11
RPS28-202ENST00000449223 CAPSLQ8WWF8 208 aa15.73■□□□□ 0.11
RPS28-202ENST00000449223 CLEC7AQ9BXN2 247 aa15.73■□□□□ 0.11
RPS28-202ENST00000449223 PIPOXQ9P0Z9 390 aa15.73■□□□□ 0.11
RPS28-202ENST00000449223 SNRPGP15A8MWD9 76 aa15.72■□□□□ 0.11
RPS28-202ENST00000449223 RAB29O14966 203 aa15.72■□□□□ 0.11
RPS28-202ENST00000449223 SUPT4H1P63272 117 aaKnown RBP15.72■□□□□ 0.11
RPS28-202ENST00000449223 ABCA11PQ4W5N1 156 aa15.72■□□□□ 0.11
RPS28-202ENST00000449223 OR13D1Q8NGV5 346 aa15.72■□□□□ 0.11
RPS28-202ENST00000449223 RTN4IP1Q8WWV3 396 aaPredicted RBP15.72■□□□□ 0.11
RPS28-202ENST00000449223 GALNT14Q96FL9 552 aa15.72■□□□□ 0.11
RPS28-202ENST00000449223 C5orf30Q96GV9 206 aa15.72■□□□□ 0.11
RPS28-202ENST00000449223 HEXA-AS1Q9H8Q6 139 aa15.72■□□□□ 0.11
RPS28-202ENST00000449223 A0A1B0GVG6 124 aa15.71■□□□□ 0.11
RPS28-202ENST00000449223 IGHV3-7P01780 117 aa15.71■□□□□ 0.11
RPS28-202ENST00000449223 DHRS2Q13268 280 aa15.71■□□□□ 0.11
RPS28-202ENST00000449223 PPP1R1AQ13522 171 aa15.71■□□□□ 0.11
RPS28-202ENST00000449223 NCR3LG1Q68D85 454 aa15.71■□□□□ 0.11
RPS28-202ENST00000449223 HCP5Q6MZN7 132 aa15.71■□□□□ 0.11
RPS28-202ENST00000449223 FAM71F2Q6NXP2 309 aa15.71■□□□□ 0.11
RPS28-202ENST00000449223 KCTD9Q7L273 389 aa15.71■□□□□ 0.11
RPS28-202ENST00000449223 VMO1Q7Z5L0 202 aa15.71■□□□□ 0.11
RPS28-202ENST00000449223 ABHD14BQ96IU4 210 aa15.71■□□□□ 0.11
RPS28-202ENST00000449223 ZNF251Q9BRH9 671 aa15.71■□□□□ 0.11
RPS28-202ENST00000449223 LPAR2Q9HBW0 351 aa15.71■□□□□ 0.11
RPS28-202ENST00000449223 SDHAF2Q9NX18 166 aa15.71■□□□□ 0.11
RPS28-202ENST00000449223 BAHCC1Q9P281 2608 aa15.71■□□□□ 0.11
RPS28-202ENST00000449223 A0A0A6YYJ9 748 aa15.7■□□□□ 0.1
RPS28-202ENST00000449223 HSD17B6O14756 317 aa15.7■□□□□ 0.1
RPS28-202ENST00000449223 MPPED1O15442 326 aa15.7■□□□□ 0.1
RPS28-202ENST00000449223 PROP1O75360 226 aa15.7■□□□□ 0.1
RPS28-202ENST00000449223 PGLYRP1O75594 196 aaPredicted RBP15.7■□□□□ 0.1
RPS28-202ENST00000449223 B3GALNT1O75752 331 aa15.7■□□□□ 0.1
RPS28-202ENST00000449223 AKR1C4P17516 323 aa15.7■□□□□ 0.1
RPS28-202ENST00000449223 S100GP29377 79 aa15.7■□□□□ 0.1
RPS28-202ENST00000449223 GPR12P47775 334 aa15.7■□□□□ 0.1
RPS28-202ENST00000449223 GNG10P50151 68 aa15.7■□□□□ 0.1
RPS28-202ENST00000449223 TMEM249Q2WGJ8 235 aa15.7■□□□□ 0.1
RPS28-202ENST00000449223 HLA-DRB5Q30154 266 aa15.7■□□□□ 0.1
RPS28-202ENST00000449223 PHLDA2Q53GA4 152 aa15.7■□□□□ 0.1
RPS28-202ENST00000449223 ZNF626Q68DY1 528 aa15.7■□□□□ 0.1
RPS28-202ENST00000449223 LYG2Q86SG7 212 aa15.7■□□□□ 0.1
RPS28-202ENST00000449223 NAA60Q9H7X0 242 aa15.7■□□□□ 0.1
RPS28-202ENST00000449223 GPN1Q9HCN4 374 aaPredicted RBP15.7■□□□□ 0.1
RPS28-202ENST00000449223 RNF150Q9ULK6 438 aa15.7■□□□□ 0.1
RPS28-202ENST00000449223 KCNS2Q9ULS6 477 aa15.7■□□□□ 0.1
RPS28-202ENST00000449223 ALG5Q9Y673 324 aa15.7■□□□□ 0.1
RPS28-202ENST00000449223 ZANQ9Y493 2812 aa15.7■□□□□ 0.1
RPS28-202ENST00000449223 SAA2-SAA4A0A096LPE2 208 aa15.69■□□□□ 0.1
RPS28-202ENST00000449223 C9orf170A2RU37 121 aa15.69■□□□□ 0.1
RPS28-202ENST00000449223 ODF3BA8MYP8 253 aa15.69■□□□□ 0.1
RPS28-202ENST00000449223 TOX4O94842 621 aa15.69■□□□□ 0.1
RPS28-202ENST00000449223 HLA-AP01891 365 aaKnown RBP15.69■□□□□ 0.1
RPS28-202ENST00000449223 SAA2P0DJI9 122 aaPredicted RBP15.69■□□□□ 0.1
RPS28-202ENST00000449223 PRRX1P54821 245 aa15.69■□□□□ 0.1
RPS28-202ENST00000449223 C4orf46Q504U0 113 aa15.69■□□□□ 0.1
RPS28-202ENST00000449223 C11orf88Q6PI97 169 aa15.69■□□□□ 0.1
RPS28-202ENST00000449223 ZNF66Q6ZN08 573 aa15.69■□□□□ 0.1
RPS28-202ENST00000449223 SGPP2Q8IWX5 399 aa15.69■□□□□ 0.1
RPS28-202ENST00000449223 ZNF431Q8TF32 576 aaPredicted RBP15.69■□□□□ 0.1
RPS28-202ENST00000449223 ST6GALNAC6Q969X2 333 aa15.69■□□□□ 0.1
RPS28-202ENST00000449223 TMEM186Q96B77 213 aa15.69■□□□□ 0.1
RPS28-202ENST00000449223 TBX15Q96SF7 602 aa15.69■□□□□ 0.1
RPS28-202ENST00000449223 BEX2Q9BXY8 128 aa15.69■□□□□ 0.1
RPS28-202ENST00000449223 BEX1Q9HBH7 125 aa15.69■□□□□ 0.1
RPS28-202ENST00000449223 SIRT7Q9NRC8 400 aa15.69■□□□□ 0.1
RPS28-202ENST00000449223 FLNBO75369 2602 aaKnown RBP15.69■□□□□ 0.1
RPS28-202ENST00000449223 A0A1W2PPE3 182 aa15.68■□□□□ 0.1
RPS28-202ENST00000449223 CREBL2O60519 120 aaPredicted RBP15.68■□□□□ 0.1
RPS28-202ENST00000449223 SFT2D2O95562 160 aa15.68■□□□□ 0.1
RPS28-202ENST00000449223 DUS4LO95620 317 aaKnown RBP15.68■□□□□ 0.1
RPS28-202ENST00000449223 IGHV4-31P0DP07 118 aa15.68■□□□□ 0.1
RPS28-202ENST00000449223 HOXB4P17483 251 aaPredicted RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms