RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 FOXH1O75593 365 aa8.79□□□□□ -1
SCN10A-201ENST00000449082 ZNF735P0CB33 412 aa8.79□□□□□ -1
SCN10A-201ENST00000449082 MMP9P14780 707 aa8.79□□□□□ -1
SCN10A-201ENST00000449082 AREGP15514 252 aa8.79□□□□□ -1
SCN10A-201ENST00000449082 TCL1AP56279 114 aa8.79□□□□□ -1
SCN10A-201ENST00000449082 TMEM54Q969K7 222 aa8.79□□□□□ -1
SCN10A-201ENST00000449082 DSPPQ9NZW4 1301 aa8.79□□□□□ -1
SCN10A-201ENST00000449082 SS18L1O75177 396 aaPredicted RBP8.79□□□□□ -1
SCN10A-201ENST00000449082 IGLV3-19P01714 112 aa8.79□□□□□ -1
SCN10A-201ENST00000449082 SCTP09683 121 aa8.79□□□□□ -1
SCN10A-201ENST00000449082 CD40P25942 277 aa8.79□□□□□ -1
SCN10A-201ENST00000449082 Q6ZT83 130 aa8.79□□□□□ -1
SCN10A-201ENST00000449082 GBGT1Q8N5D6 347 aa8.79□□□□□ -1
SCN10A-201ENST00000449082 KCNK7Q9Y2U2 307 aa8.79□□□□□ -1
SCN10A-201ENST00000449082 J3QW42 95 aa8.78□□□□□ -1
SCN10A-201ENST00000449082 DLL1O00548 723 aa8.78□□□□□ -1
SCN10A-201ENST00000449082 WNT9BO14905 357 aa8.78□□□□□ -1
SCN10A-201ENST00000449082 IGKV3-11P04433 115 aa8.78□□□□□ -1
SCN10A-201ENST00000449082 CSN3P07498 182 aa8.78□□□□□ -1
SCN10A-201ENST00000449082 OR10J6PQ8NGY7 276 aa8.78□□□□□ -1
SCN10A-201ENST00000449082 LINC00470Q9BZP3 86 aa8.78□□□□□ -1
SCN10A-201ENST00000449082 DLL3Q9NYJ7 618 aa8.78□□□□□ -1
SCN10A-201ENST00000449082 NINQ8N4C6 2090 aa8.78□□□□□ -1
SCN10A-201ENST00000449082 APOBEC3AP31941 199 aaPredicted RBP8.78□□□□□ -1
SCN10A-201ENST00000449082 LTBRP36941 435 aa8.78□□□□□ -1
SCN10A-201ENST00000449082 COMPP49747 757 aaPredicted RBP8.78□□□□□ -1
SCN10A-201ENST00000449082 CHAC2Q8WUX2 184 aa8.78□□□□□ -1
SCN10A-201ENST00000449082 C16orf92Q96LL3 132 aa8.78□□□□□ -1
SCN10A-201ENST00000449082 MS4A10Q96PG2 267 aa8.78□□□□□ -1
SCN10A-201ENST00000449082 AMELYQ99218 206 aa8.78□□□□□ -1
SCN10A-201ENST00000449082 WNT5BQ9H1J7 359 aa8.78□□□□□ -1
SCN10A-201ENST00000449082 DEDDO75618 318 aa8.78□□□□□ -1
SCN10A-201ENST00000449082 LIPFP07098 398 aa8.78□□□□□ -1
SCN10A-201ENST00000449082 LAMTOR1Q6IAA8 161 aa8.78□□□□□ -1
SCN10A-201ENST00000449082 ALX4Q9H161 411 aaPredicted RBP8.78□□□□□ -1
SCN10A-201ENST00000449082 KCNE5Q9UJ90 142 aa8.78□□□□□ -1
SCN10A-201ENST00000449082 M0R2Z0 102 aa8.78□□□□□ -1
SCN10A-201ENST00000449082 CEBPDP49716 269 aaPredicted RBP8.78□□□□□ -1
SCN10A-201ENST00000449082 SELENOTP62341 195 aa8.78□□□□□ -1
SCN10A-201ENST00000449082 LINC01560Q8TB33 94 aa8.78□□□□□ -1
SCN10A-201ENST00000449082 FAM206AQ9NX38 181 aa8.78□□□□□ -1
SCN10A-201ENST00000449082 WDR90Q96KV7 1748 aa8.78□□□□□ -1
SCN10A-201ENST00000449082 BMPR1BO00238 502 aa8.78□□□□□ -1
SCN10A-201ENST00000449082 RPL7P18124 248 aaKnown RBP8.78□□□□□ -1
SCN10A-201ENST00000449082 CXCL3P19876 107 aa8.78□□□□□ -1
SCN10A-201ENST00000449082 KIR2DL2P43627 348 aaPredicted RBP8.78□□□□□ -1
SCN10A-201ENST00000449082 ARF6P62330 175 aa8.78□□□□□ -1
SCN10A-201ENST00000449082 CEBPEQ15744 281 aa8.78□□□□□ -1
SCN10A-201ENST00000449082 TIMM23BQ5SRD1 257 aa8.78□□□□□ -1
SCN10A-201ENST00000449082 SPANXN1Q5VSR9 72 aa8.78□□□□□ -1
SCN10A-201ENST00000449082 ABHD12Q8N2K0 398 aa8.78□□□□□ -1
SCN10A-201ENST00000449082 AUP1Q9Y679 476 aa8.78□□□□□ -1
SCN10A-201ENST00000449082 SEC11BP0C7V7 166 aa8.77□□□□□ -1
SCN10A-201ENST00000449082 NUBP1P53384 320 aa8.77□□□□□ -1
SCN10A-201ENST00000449082 TM4SF20Q53R12 229 aa8.77□□□□□ -1
SCN10A-201ENST00000449082 SLC25A53Q5H9E4 307 aa8.77□□□□□ -1
SCN10A-201ENST00000449082 TMEM78Q5T7P6 136 aa8.77□□□□□ -1
SCN10A-201ENST00000449082 PRNTQ86SH4 94 aa8.77□□□□□ -1
SCN10A-201ENST00000449082 OR9G1Q8NH87 305 aa8.77□□□□□ -1
SCN10A-201ENST00000449082 TMEM45BQ96B21 275 aa8.77□□□□□ -1
SCN10A-201ENST00000449082 GUCD1Q96NT3 240 aa8.77□□□□□ -1
SCN10A-201ENST00000449082 MRPL37Q9BZE1 423 aaKnown RBP8.77□□□□□ -1
SCN10A-201ENST00000449082 JPT1Q9UK76 154 aa8.77□□□□□ -1
SCN10A-201ENST00000449082 SCN10AQ9Y5Y9 1956 aa8.77□□□□□ -1.01
SCN10A-201ENST00000449082 CRISP2P16562 243 aa8.77□□□□□ -1.01
SCN10A-201ENST00000449082 TFPI2P48307 235 aa8.77□□□□□ -1.01
SCN10A-201ENST00000449082 C11orf91Q3C1V1 193 aa8.77□□□□□ -1.01
SCN10A-201ENST00000449082 TMEM204Q9BSN7 226 aa8.77□□□□□ -1.01
SCN10A-201ENST00000449082 GSX1Q9H4S2 264 aaPredicted RBP8.77□□□□□ -1.01
SCN10A-201ENST00000449082 PLXNA1Q9UIW2 1896 aa8.77□□□□□ -1.01
SCN10A-201ENST00000449082 ZNF729A6NN14 1252 aaPredicted RBP8.77□□□□□ -1.01
SCN10A-201ENST00000449082 MPDU1O75352 247 aa8.77□□□□□ -1.01
SCN10A-201ENST00000449082 MELTFP08582 738 aa8.77□□□□□ -1.01
SCN10A-201ENST00000449082 PTGDSP41222 190 aa8.77□□□□□ -1.01
SCN10A-201ENST00000449082 FAM106AQ4KMX7 169 aa8.77□□□□□ -1.01
SCN10A-201ENST00000449082 Q6ZN92 141 aa8.77□□□□□ -1.01
SCN10A-201ENST00000449082 HSD17B13Q7Z5P4 300 aaPredicted RBP8.77□□□□□ -1.01
SCN10A-201ENST00000449082 LDLRAD3Q86YD5 345 aa8.77□□□□□ -1.01
SCN10A-201ENST00000449082 ZNF703Q9H7S9 590 aaPredicted RBP8.77□□□□□ -1.01
SCN10A-201ENST00000449082 LYRM2Q9NU23 88 aaPredicted RBP8.77□□□□□ -1.01
SCN10A-201ENST00000449082 RALYQ9UKM9 306 aaKnown RBP8.77□□□□□ -1.01
SCN10A-201ENST00000449082 ISLRO14498 428 aa8.77□□□□□ -1.01
SCN10A-201ENST00000449082 RECKO95980 971 aa8.77□□□□□ -1.01
SCN10A-201ENST00000449082 PMS2P11Q13670 270 aa8.77□□□□□ -1.01
SCN10A-201ENST00000449082 HLA-DRB5Q30154 266 aa8.77□□□□□ -1.01
SCN10A-201ENST00000449082 C1orf100Q5SVJ3 147 aa8.77□□□□□ -1.01
SCN10A-201ENST00000449082 C10orf128Q5T292 105 aa8.77□□□□□ -1.01
SCN10A-201ENST00000449082 SIGLEC12Q96PQ1 595 aa8.77□□□□□ -1.01
SCN10A-201ENST00000449082 CLEC7AQ9BXN2 247 aa8.77□□□□□ -1.01
SCN10A-201ENST00000449082 RHBDL1O75783 438 aa8.77□□□□□ -1.01
SCN10A-201ENST00000449082 OR10J1P30954 320 aa8.77□□□□□ -1.01
SCN10A-201ENST00000449082 MFAP4P55083 255 aa8.77□□□□□ -1.01
SCN10A-201ENST00000449082 TMEM183BQ1AE95 376 aa8.77□□□□□ -1.01
SCN10A-201ENST00000449082 RRN3P1Q2M238 152 aa8.77□□□□□ -1.01
SCN10A-201ENST00000449082 OR11H7Q8NGC8 314 aa8.77□□□□□ -1.01
SCN10A-201ENST00000449082 HSF4Q9ULV5 492 aa8.77□□□□□ -1.01
SCN10A-201ENST00000449082 PXMP4Q9Y6I8 212 aa8.77□□□□□ -1.01
SCN10A-201ENST00000449082 TRAV30A0A087WSZ9 112 aa8.76□□□□□ -1.01
SCN10A-201ENST00000449082 NPIPB13A6NJU9 1138 aa8.76□□□□□ -1.01
SCN10A-201ENST00000449082 NPIPB4C9JG80 1138 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms