RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-210ENST00000449058 CCL11P51671 97 aa14.21□□□□□ -0.13
TOM1-210ENST00000449058 CEBPGP53567 150 aa14.21□□□□□ -0.13
TOM1-210ENST00000449058 IGFL2Q6UWQ7 119 aa14.21□□□□□ -0.13
TOM1-210ENST00000449058 TMEM14EPQ6UXP3 125 aa14.21□□□□□ -0.13
TOM1-210ENST00000449058 SLC35E3Q7Z769 313 aa14.21□□□□□ -0.13
TOM1-210ENST00000449058 CXorf67Q86X51 503 aaPredicted RBP14.21□□□□□ -0.13
TOM1-210ENST00000449058 TVP23CQ96ET8 276 aa14.21□□□□□ -0.13
TOM1-210ENST00000449058 WDR61Q9GZS3 305 aaKnown RBP14.21□□□□□ -0.13
TOM1-210ENST00000449058 OR2D2Q9H210 308 aa14.21□□□□□ -0.13
TOM1-210ENST00000449058 HSPB7Q9UBY9 170 aa14.21□□□□□ -0.13
TOM1-210ENST00000449058 HBZP02008 142 aa14.2□□□□□ -0.14
TOM1-210ENST00000449058 KITLGP21583 273 aa14.2□□□□□ -0.14
TOM1-210ENST00000449058 TUBG1P23258 451 aa14.2□□□□□ -0.14
TOM1-210ENST00000449058 IL2RGP31785 369 aa14.2□□□□□ -0.14
TOM1-210ENST00000449058 TAGLN2P37802 199 aaKnown RBP14.2□□□□□ -0.14
TOM1-210ENST00000449058 RPL30P62888 115 aaKnown RBP14.2□□□□□ -0.14
TOM1-210ENST00000449058 DLK1P80370 383 aa14.2□□□□□ -0.14
TOM1-210ENST00000449058 TNFRSF9Q07011 255 aa14.2□□□□□ -0.14
TOM1-210ENST00000449058 AESQ08117 197 aa14.2□□□□□ -0.14
TOM1-210ENST00000449058 MSMO1Q15800 293 aa14.2□□□□□ -0.14
TOM1-210ENST00000449058 SPANXN5Q5MJ07 72 aa14.2□□□□□ -0.14
TOM1-210ENST00000449058 VWA1Q6PCB0 445 aa14.2□□□□□ -0.14
TOM1-210ENST00000449058 LILRB2Q8N423 598 aa14.2□□□□□ -0.14
TOM1-210ENST00000449058 C9orf106Q8NAJ2 232 aa14.2□□□□□ -0.14
TOM1-210ENST00000449058 OR52L2PQ8NGH6 319 aa14.2□□□□□ -0.14
TOM1-210ENST00000449058 OR4C12Q96R67 309 aa14.2□□□□□ -0.14
TOM1-210ENST00000449058 NIPSNAP3BQ9BS92 247 aa14.2□□□□□ -0.14
TOM1-210ENST00000449058 TUBG2Q9NRH3 451 aa14.2□□□□□ -0.14
TOM1-210ENST00000449058 CISD1Q9NZ45 108 aaKnown RBP14.2□□□□□ -0.14
TOM1-210ENST00000449058 GNG13Q9P2W3 67 aa14.2□□□□□ -0.14
TOM1-210ENST00000449058 HOXC12P31275 282 aa14.2□□□□□ -0.14
TOM1-210ENST00000449058 SRSF6Q13247 344 aaKnown RBP14.2□□□□□ -0.14
TOM1-210ENST00000449058 ZNF787Q6DD87 383 aa14.2□□□□□ -0.14
TOM1-210ENST00000449058 FAM53AQ6NSI3 398 aaPredicted RBP14.2□□□□□ -0.14
TOM1-210ENST00000449058 WDR82Q6UXN9 313 aa14.2□□□□□ -0.14
TOM1-210ENST00000449058 Q6ZR03 302 aa14.2□□□□□ -0.14
TOM1-210ENST00000449058 LURAP1LQ8IV03 231 aa14.2□□□□□ -0.14
TOM1-210ENST00000449058 RCC1LQ96I51 464 aaKnown RBP14.2□□□□□ -0.14
TOM1-210ENST00000449058 RBKSQ9H477 322 aa14.2□□□□□ -0.14
TOM1-210ENST00000449058 ZNF727A8MUV8 499 aa14.19□□□□□ -0.14
TOM1-210ENST00000449058 S100A8P05109 93 aa14.19□□□□□ -0.14
TOM1-210ENST00000449058 BCL2P10415 239 aa14.19□□□□□ -0.14
TOM1-210ENST00000449058 OR2B8PP59922 312 aa14.19□□□□□ -0.14
TOM1-210ENST00000449058 HOXA4Q00056 320 aaPredicted RBP14.19□□□□□ -0.14
TOM1-210ENST00000449058 SSX7Q7RTT5 188 aa14.19□□□□□ -0.14
TOM1-210ENST00000449058 PIP4P1Q86T03 277 aa14.19□□□□□ -0.14
TOM1-210ENST00000449058 BRWD1-AS2P59051 145 aa14.19□□□□□ -0.14
TOM1-210ENST00000449058 SLC38A11Q08AI6 406 aa14.19□□□□□ -0.14
TOM1-210ENST00000449058 PRAMEF6Q5VXH4 476 aa14.19□□□□□ -0.14
TOM1-210ENST00000449058 FAM90A2PQ658T7 463 aa14.19□□□□□ -0.14
TOM1-210ENST00000449058 ZNF665Q9H7R5 613 aa14.19□□□□□ -0.14
TOM1-210ENST00000449058 ZNF891A8MT65 544 aaPredicted RBP14.18□□□□□ -0.14
TOM1-210ENST00000449058 CECR9P0C854 216 aa14.18□□□□□ -0.14
TOM1-210ENST00000449058 FABP9Q0Z7S8 132 aa14.18□□□□□ -0.14
TOM1-210ENST00000449058 TMEM41BQ5BJD5 291 aa14.18□□□□□ -0.14
TOM1-210ENST00000449058 LCN15Q6UWW0 184 aa14.18□□□□□ -0.14
TOM1-210ENST00000449058 TAF15Q92804 592 aaKnown RBP eCLIP14.18□□□□□ -0.14
TOM1-210ENST00000449058 PINX1Q96BK5 328 aaKnown RBP14.18□□□□□ -0.14
TOM1-210ENST00000449058 SIRT7Q9NRC8 400 aa14.18□□□□□ -0.14
TOM1-210ENST00000449058 CACNA1GO43497 2377 aa14.18□□□□□ -0.14
TOM1-210ENST00000449058 CXorf65A6NEN9 183 aa14.18□□□□□ -0.14
TOM1-210ENST00000449058 PRR33A8MZF0 331 aa14.18□□□□□ -0.14
TOM1-210ENST00000449058 IFNL4K9M1U5 179 aa14.18□□□□□ -0.14
TOM1-210ENST00000449058 TIMM8AO60220 97 aaPredicted RBP14.18□□□□□ -0.14
TOM1-210ENST00000449058 PTBP3O95758 552 aaKnown RBP14.18□□□□□ -0.14
TOM1-210ENST00000449058 IFNA17P01571 189 aa14.18□□□□□ -0.14
TOM1-210ENST00000449058 IGLV1-44P01699 117 aa14.18□□□□□ -0.14
TOM1-210ENST00000449058 G6PCP35575 357 aa14.18□□□□□ -0.14
TOM1-210ENST00000449058 CATR1Q13166 79 aa14.18□□□□□ -0.14
TOM1-210ENST00000449058 SEBOXQ9HB31 216 aaPredicted RBP14.18□□□□□ -0.14
TOM1-210ENST00000449058 A0A1B0GWJ7 208 aa14.17□□□□□ -0.14
TOM1-210ENST00000449058 LRRC30A6NM36 301 aa14.17□□□□□ -0.14
TOM1-210ENST00000449058 CLDN1O95832 211 aa14.17□□□□□ -0.14
TOM1-210ENST00000449058 KRASP01116 189 aa14.17□□□□□ -0.14
TOM1-210ENST00000449058 TFF1P04155 84 aa14.17□□□□□ -0.14
TOM1-210ENST00000449058 SMIM6P0DI80 62 aa14.17□□□□□ -0.14
TOM1-210ENST00000449058 GABRA2P47869 451 aa14.17□□□□□ -0.14
TOM1-210ENST00000449058 OR2B11Q5JQS5 317 aa14.17□□□□□ -0.14
TOM1-210ENST00000449058 RBMS3Q6XE24 437 aaKnown RBP14.17□□□□□ -0.14
TOM1-210ENST00000449058 CENPVQ7Z7K6 275 aaPredicted RBP14.17□□□□□ -0.14
TOM1-210ENST00000449058 ZNF808Q8N4W9 903 aaPredicted RBP14.17□□□□□ -0.14
TOM1-210ENST00000449058 MRGPRDQ8TDS7 321 aa14.17□□□□□ -0.14
TOM1-210ENST00000449058 LURAP1Q96LR2 239 aa14.17□□□□□ -0.14
TOM1-210ENST00000449058 PLSCR4Q9NRQ2 329 aa14.17□□□□□ -0.14
TOM1-210ENST00000449058 TIMM9Q9Y5J7 89 aa14.17□□□□□ -0.14
TOM1-210ENST00000449058 TRAV17A0A0B4J275 112 aa14.17□□□□□ -0.14
TOM1-210ENST00000449058 ODAMA1E959 279 aa14.17□□□□□ -0.14
TOM1-210ENST00000449058 ZFP92A6NM28 416 aa14.17□□□□□ -0.14
TOM1-210ENST00000449058 C17orf98A8MV24 154 aa14.17□□□□□ -0.14
TOM1-210ENST00000449058 S1PR2O95136 353 aa14.17□□□□□ -0.14
TOM1-210ENST00000449058 GLIPR1P48060 266 aa14.17□□□□□ -0.14
TOM1-210ENST00000449058 S100A12P80511 92 aa14.17□□□□□ -0.14
TOM1-210ENST00000449058 ZNF816Q0VGE8 651 aaPredicted RBP14.17□□□□□ -0.14
TOM1-210ENST00000449058 FOXF2Q12947 444 aa14.17□□□□□ -0.14
TOM1-210ENST00000449058 ELOBQ15370 118 aa14.17□□□□□ -0.14
TOM1-210ENST00000449058 TCTEX1D1Q8N7M0 179 aa14.17□□□□□ -0.14
TOM1-210ENST00000449058 NINJ1Q92982 152 aa14.17□□□□□ -0.14
TOM1-210ENST00000449058 SARAFQ96BY9 339 aa14.17□□□□□ -0.14
TOM1-210ENST00000449058 ASCL3Q9NQ33 180 aa14.17□□□□□ -0.14
TOM1-210ENST00000449058 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms