RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 SAA2P0DJI9 122 aaPredicted RBP11.61□□□□□ -0.55
USP39-206ENST00000448971 SERPINB10P48595 397 aa11.61□□□□□ -0.55
USP39-206ENST00000448971 GNG2P59768 71 aa11.61□□□□□ -0.55
USP39-206ENST00000448971 CROCCP3Q8IVE0 287 aa11.61□□□□□ -0.55
USP39-206ENST00000448971 Q8N2B8 174 aa11.61□□□□□ -0.55
USP39-206ENST00000448971 OR13F1Q8NGS4 319 aa11.61□□□□□ -0.55
USP39-206ENST00000448971 OR5H6Q8NGV6 325 aa11.61□□□□□ -0.55
USP39-206ENST00000448971 EDARADDQ8WWZ3 215 aa11.61□□□□□ -0.55
USP39-206ENST00000448971 MRPS26Q9BYN8 205 aaKnown RBP11.61□□□□□ -0.55
USP39-206ENST00000448971 TMEM235A6NFC5 223 aa11.6□□□□□ -0.55
USP39-206ENST00000448971 BET1O15155 118 aa11.6□□□□□ -0.55
USP39-206ENST00000448971 LANCL1O43813 399 aa11.6□□□□□ -0.55
USP39-206ENST00000448971 CEACAM6P40199 344 aa11.6□□□□□ -0.55
USP39-206ENST00000448971 NCS1P62166 190 aa11.6□□□□□ -0.55
USP39-206ENST00000448971 HERPUD1Q15011 391 aa11.6□□□□□ -0.55
USP39-206ENST00000448971 CDNFQ49AH0 187 aa11.6□□□□□ -0.55
USP39-206ENST00000448971 LY6G6FQ5SQ64 297 aa11.6□□□□□ -0.55
USP39-206ENST00000448971 Q6ZS46 218 aa11.6□□□□□ -0.55
USP39-206ENST00000448971 C11orf44Q8N8P7 122 aa11.6□□□□□ -0.55
USP39-206ENST00000448971 OR4A4PQ8NGN8 299 aa11.6□□□□□ -0.55
USP39-206ENST00000448971 OR2T10Q8NGZ9 312 aa11.6□□□□□ -0.55
USP39-206ENST00000448971 SLC25A38Q96DW6 304 aa11.6□□□□□ -0.55
USP39-206ENST00000448971 MRPL20Q9BYC9 149 aaKnown RBP11.6□□□□□ -0.55
USP39-206ENST00000448971 PARP12Q9H0J9 701 aaKnown RBP11.6□□□□□ -0.55
USP39-206ENST00000448971 SERTAD4Q9NUC0 356 aa11.6□□□□□ -0.55
USP39-206ENST00000448971 PIPOXQ9P0Z9 390 aa11.6□□□□□ -0.55
USP39-206ENST00000448971 ZNF230Q9UIE0 474 aaPredicted RBP11.6□□□□□ -0.55
USP39-206ENST00000448971 KMT2CQ8NEZ4 4911 aaKnown RBP11.59□□□□□ -0.55
USP39-206ENST00000448971 TMEM127O75204 238 aa11.59□□□□□ -0.55
USP39-206ENST00000448971 MOSP00540 346 aa11.59□□□□□ -0.55
USP39-206ENST00000448971 CD1BP29016 333 aa11.59□□□□□ -0.55
USP39-206ENST00000448971 OR3A3P47888 321 aa11.59□□□□□ -0.55
USP39-206ENST00000448971 VBP1P61758 197 aa11.59□□□□□ -0.55
USP39-206ENST00000448971 LSAMPQ13449 338 aa11.59□□□□□ -0.55
USP39-206ENST00000448971 BEAN1Q3B7T3 259 aa11.59□□□□□ -0.55
USP39-206ENST00000448971 ZNF833PQ6ZTB9 187 aa11.59□□□□□ -0.55
USP39-206ENST00000448971 ODF3L1Q8IXM7 274 aa11.59□□□□□ -0.55
USP39-206ENST00000448971 NUDCD2Q8WVJ2 157 aa11.59□□□□□ -0.55
USP39-206ENST00000448971 EAF1Q96JC9 268 aaPredicted RBP11.59□□□□□ -0.55
USP39-206ENST00000448971 S1PR3Q99500 378 aa11.59□□□□□ -0.55
USP39-206ENST00000448971 CABLES2Q9BTV7 478 aa11.59□□□□□ -0.55
USP39-206ENST00000448971 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.59□□□□□ -0.55
USP39-206ENST00000448971 ELF5Q9UKW6 265 aaPredicted RBP11.59□□□□□ -0.55
USP39-206ENST00000448971 TET2Q6N021 2002 aaPredicted RBP11.59□□□□□ -0.55
USP39-206ENST00000448971 IGKV1-6A0A0C4DH72 117 aa11.58□□□□□ -0.56
USP39-206ENST00000448971 NCBP2LA6PVI3 153 aaKnown RBP11.58□□□□□ -0.56
USP39-206ENST00000448971 ZNF736B4DX44 427 aaPredicted RBP11.58□□□□□ -0.56
USP39-206ENST00000448971 RAB29O14966 203 aa11.58□□□□□ -0.56
USP39-206ENST00000448971 FGF16O43320 207 aa11.58□□□□□ -0.56
USP39-206ENST00000448971 FBXO24O75426 580 aa11.58□□□□□ -0.56
USP39-206ENST00000448971 GSTP1P09211 210 aaKnown RBP11.58□□□□□ -0.56
USP39-206ENST00000448971 DTYMKP23919 212 aa11.58□□□□□ -0.56
USP39-206ENST00000448971 RPS19P39019 145 aaKnown RBP11.58□□□□□ -0.56
USP39-206ENST00000448971 RPL39P5Q59GN2 51 aa11.58□□□□□ -0.56
USP39-206ENST00000448971 KPRPQ5T749 579 aaPredicted RBP11.58□□□□□ -0.56
USP39-206ENST00000448971 HACD4Q5VWC8 232 aa11.58□□□□□ -0.56
USP39-206ENST00000448971 FAM71F2Q6NXP2 309 aa11.58□□□□□ -0.56
USP39-206ENST00000448971 C5orf56Q8N8D9 126 aa11.58□□□□□ -0.56
USP39-206ENST00000448971 OR10J5Q8NHC4 309 aa11.58□□□□□ -0.56
USP39-206ENST00000448971 ABHD14BQ96IU4 210 aa11.58□□□□□ -0.56
USP39-206ENST00000448971 GINS4Q9BRT9 223 aa11.58□□□□□ -0.56
USP39-206ENST00000448971 RDH8Q9NYR8 311 aa11.58□□□□□ -0.56
USP39-206ENST00000448971 SPATA2Q9UM82 520 aa11.58□□□□□ -0.56
USP39-206ENST00000448971 TRAV18A0A075B6X5 111 aa11.57□□□□□ -0.56
USP39-206ENST00000448971 G3V4G9 280 aa11.57□□□□□ -0.56
USP39-206ENST00000448971 ITGB1BP1O14713 200 aa11.57□□□□□ -0.56
USP39-206ENST00000448971 GABARAPO95166 117 aa11.57□□□□□ -0.56
USP39-206ENST00000448971 AMY1AP04745 511 aa11.57□□□□□ -0.56
USP39-206ENST00000448971 AMY2AP04746 511 aa11.57□□□□□ -0.56
USP39-206ENST00000448971 GSTT2P0CG29 244 aa11.57□□□□□ -0.56
USP39-206ENST00000448971 GSTT2BP0CG30 244 aa11.57□□□□□ -0.56
USP39-206ENST00000448971 GPR12P47775 334 aa11.57□□□□□ -0.56
USP39-206ENST00000448971 PITPNAQ00169 270 aa11.57□□□□□ -0.56
USP39-206ENST00000448971 EBI3Q14213 229 aa11.57□□□□□ -0.56
USP39-206ENST00000448971 MMDQ15546 238 aa11.57□□□□□ -0.56
USP39-206ENST00000448971 C2orf68Q2NKX9 166 aa11.57□□□□□ -0.56
USP39-206ENST00000448971 ZNF260Q3ZCT1 412 aa11.57□□□□□ -0.56
USP39-206ENST00000448971 IGSF11Q5DX21 431 aa11.57□□□□□ -0.56
USP39-206ENST00000448971 GPR141Q7Z602 305 aa11.57□□□□□ -0.56
USP39-206ENST00000448971 NABP2Q9BQ15 211 aa11.57□□□□□ -0.56
USP39-206ENST00000448971 C11orf54Q9H0W9 315 aaPredicted RBP11.57□□□□□ -0.56
USP39-206ENST00000448971 DIABLOQ9NR28 239 aa11.57□□□□□ -0.56
USP39-206ENST00000448971 ZNF221Q9UK13 617 aa11.57□□□□□ -0.56
USP39-206ENST00000448971 RBM7Q9Y580 266 aaKnown RBP11.57□□□□□ -0.56
USP39-206ENST00000448971 A0A0A6YYH2 397 aa11.56□□□□□ -0.56
USP39-206ENST00000448971 A6NJ64 397 aa11.56□□□□□ -0.56
USP39-206ENST00000448971 CSF1P09603 554 aa11.56□□□□□ -0.56
USP39-206ENST00000448971 PNLIPRP3Q17RR3 467 aa11.56□□□□□ -0.56
USP39-206ENST00000448971 UBE2NLQ5JXB2 153 aa11.56□□□□□ -0.56
USP39-206ENST00000448971 SAMD5Q5TGI4 173 aa11.56□□□□□ -0.56
USP39-206ENST00000448971 GPR107Q5VW38 600 aa11.56□□□□□ -0.56
USP39-206ENST00000448971 FAM131AQ6UXB0 335 aa11.56□□□□□ -0.56
USP39-206ENST00000448971 Q8N6K4 173 aa11.56□□□□□ -0.56
USP39-206ENST00000448971 SAMD12Q8N8I0 201 aa11.56□□□□□ -0.56
USP39-206ENST00000448971 SLC25A46Q96AG3 418 aa11.56□□□□□ -0.56
USP39-206ENST00000448971 RBMXL1Q96E39 390 aaKnown RBP11.56□□□□□ -0.56
USP39-206ENST00000448971 ST6GALNAC5Q9BVH7 336 aa11.56□□□□□ -0.56
USP39-206ENST00000448971 NAA50Q9GZZ1 169 aaKnown RBP11.56□□□□□ -0.56
USP39-206ENST00000448971 OR2D2Q9H210 308 aa11.56□□□□□ -0.56
USP39-206ENST00000448971 GHITMQ9H3K2 345 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms