RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 MBPP02686 304 aaPredicted RBP8.8□□□□□ -1
VIPAS39-203ENST00000448935 TFF1P04155 84 aa8.8□□□□□ -1
VIPAS39-203ENST00000448935 TPT1P13693 172 aaKnown RBP8.8□□□□□ -1
VIPAS39-203ENST00000448935 SSTR5P35346 364 aa8.8□□□□□ -1
VIPAS39-203ENST00000448935 NKX2-1P43699 371 aaPredicted RBP8.8□□□□□ -1
VIPAS39-203ENST00000448935 P2RY1P47900 373 aa8.8□□□□□ -1
VIPAS39-203ENST00000448935 HOXA4Q00056 320 aaPredicted RBP8.8□□□□□ -1
VIPAS39-203ENST00000448935 NMSQ5H8A3 153 aa8.8□□□□□ -1
VIPAS39-203ENST00000448935 GPR157Q5UAW9 335 aa8.8□□□□□ -1
VIPAS39-203ENST00000448935 C1orf229Q6ZS94 237 aaPredicted RBP8.8□□□□□ -1
VIPAS39-203ENST00000448935 FOXRED2Q8IWF2 684 aa8.8□□□□□ -1
VIPAS39-203ENST00000448935 ZNF808Q8N4W9 903 aaPredicted RBP8.8□□□□□ -1
VIPAS39-203ENST00000448935 TPRX1Q8N7U7 411 aa8.8□□□□□ -1
VIPAS39-203ENST00000448935 RNASE11Q8TAA1 199 aaKnown RBP8.8□□□□□ -1
VIPAS39-203ENST00000448935 UBALD1Q8TB05 177 aa8.8□□□□□ -1
VIPAS39-203ENST00000448935 LINC01560Q8TB33 94 aa8.8□□□□□ -1
VIPAS39-203ENST00000448935 LSM10Q969L4 123 aaKnown RBP8.8□□□□□ -1
VIPAS39-203ENST00000448935 GAFA1Q96PS6 74 aa8.8□□□□□ -1
VIPAS39-203ENST00000448935 YPEL2Q96QA6 119 aa8.8□□□□□ -1
VIPAS39-203ENST00000448935 OR2D2Q9H210 308 aa8.8□□□□□ -1
VIPAS39-203ENST00000448935 CISD1Q9NZ45 108 aaKnown RBP8.8□□□□□ -1
VIPAS39-203ENST00000448935 KIAA2026Q5HYC2 2103 aa8.79□□□□□ -1
VIPAS39-203ENST00000448935 PPIAL4EA0A075B759 164 aa8.79□□□□□ -1
VIPAS39-203ENST00000448935 A0A1B0GU03 582 aa8.79□□□□□ -1
VIPAS39-203ENST00000448935 RPS10-NUDT3A0A1W2PQS6 291 aa8.79□□□□□ -1
VIPAS39-203ENST00000448935 PPIAL4DF5H284 164 aa8.79□□□□□ -1
VIPAS39-203ENST00000448935 TMEM178BH3BS89 294 aa8.79□□□□□ -1
VIPAS39-203ENST00000448935 ITGB1BP1O14713 200 aa8.79□□□□□ -1
VIPAS39-203ENST00000448935 PPIAL4FP0DN26 164 aa8.79□□□□□ -1
VIPAS39-203ENST00000448935 MMP9P14780 707 aa8.79□□□□□ -1
VIPAS39-203ENST00000448935 RPL12P30050 165 aaKnown RBP8.79□□□□□ -1
VIPAS39-203ENST00000448935 EIF5AL1Q6IS14 154 aaKnown RBP8.79□□□□□ -1
VIPAS39-203ENST00000448935 ALKAL2Q6UX46 152 aa8.79□□□□□ -1
VIPAS39-203ENST00000448935 ZNF66Q6ZN08 573 aa8.79□□□□□ -1
VIPAS39-203ENST00000448935 LRRC20Q8TCA0 184 aa8.79□□□□□ -1
VIPAS39-203ENST00000448935 RRNAD1Q96FB5 475 aaKnown RBP8.79□□□□□ -1
VIPAS39-203ENST00000448935 CCDC140Q96MF4 163 aa8.79□□□□□ -1
VIPAS39-203ENST00000448935 HSD17B10Q99714 261 aaKnown RBP8.79□□□□□ -1
VIPAS39-203ENST00000448935 SLC25A32Q9H2D1 315 aa8.79□□□□□ -1
VIPAS39-203ENST00000448935 CALYQ9NYX4 217 aa8.79□□□□□ -1
VIPAS39-203ENST00000448935 GNG12Q9UBI6 72 aa8.79□□□□□ -1
VIPAS39-203ENST00000448935 LPAR3Q9UBY5 353 aa8.79□□□□□ -1
VIPAS39-203ENST00000448935 LAMP3Q9UQV4 416 aa8.79□□□□□ -1
VIPAS39-203ENST00000448935 PPIAL4AQ9Y536 164 aa8.79□□□□□ -1
VIPAS39-203ENST00000448935 FASNP49327 2511 aaKnown RBP8.79□□□□□ -1
VIPAS39-203ENST00000448935 IGF2RP11717 2491 aa8.79□□□□□ -1
VIPAS39-203ENST00000448935 POLEQ07864 2286 aa8.79□□□□□ -1
VIPAS39-203ENST00000448935 ATMQ13315 3056 aa8.78□□□□□ -1
VIPAS39-203ENST00000448935 TLN1Q9Y490 2541 aaKnown RBP8.78□□□□□ -1
VIPAS39-203ENST00000448935 TANC2Q9HCD6 1990 aa8.78□□□□□ -1
VIPAS39-203ENST00000448935 FAM208BQ5VWN6 2430 aa8.78□□□□□ -1
VIPAS39-203ENST00000448935 hADV38S2A0JD32 116 aa8.78□□□□□ -1
VIPAS39-203ENST00000448935 ZNF729A6NN14 1252 aaPredicted RBP8.78□□□□□ -1
VIPAS39-203ENST00000448935 WRBO00258 174 aa8.78□□□□□ -1
VIPAS39-203ENST00000448935 ADAM20O43506 726 aa8.78□□□□□ -1
VIPAS39-203ENST00000448935 NDUFA2O43678 99 aa8.78□□□□□ -1
VIPAS39-203ENST00000448935 GPR137BO60478 399 aa8.78□□□□□ -1
VIPAS39-203ENST00000448935 GYPAP02724 150 aa8.78□□□□□ -1
VIPAS39-203ENST00000448935 HKR1P10072 659 aa8.78□□□□□ -1
VIPAS39-203ENST00000448935 AGAP20933 346 aa8.78□□□□□ -1
VIPAS39-203ENST00000448935 PPP1CCP36873 323 aaKnown RBP8.78□□□□□ -1
VIPAS39-203ENST00000448935 RAB7AP51149 207 aa8.78□□□□□ -1
VIPAS39-203ENST00000448935 MEF2CQ06413 473 aaPredicted RBP8.78□□□□□ -1
VIPAS39-203ENST00000448935 ZNF672Q499Z4 452 aaPredicted RBP8.78□□□□□ -1
VIPAS39-203ENST00000448935 FAM201AQ5SY85 155 aa8.78□□□□□ -1
VIPAS39-203ENST00000448935 FAM219AQ8IW50 185 aa8.78□□□□□ -1
VIPAS39-203ENST00000448935 BAP18Q8IXM2 172 aa8.78□□□□□ -1
VIPAS39-203ENST00000448935 DEFB108BQ8NET1 73 aa8.78□□□□□ -1
VIPAS39-203ENST00000448935 OR52M1Q8NGK5 317 aa8.78□□□□□ -1
VIPAS39-203ENST00000448935 RFESDQ8TAC1 157 aa8.78□□□□□ -1
VIPAS39-203ENST00000448935 CORO2AQ92828 525 aa8.78□□□□□ -1
VIPAS39-203ENST00000448935 SPOCK3Q9BQ16 436 aa8.78□□□□□ -1
VIPAS39-203ENST00000448935 TMEM106BQ9NUM4 274 aa8.78□□□□□ -1
VIPAS39-203ENST00000448935 RAI1Q7Z5J4 1906 aaPredicted RBP8.78□□□□□ -1
VIPAS39-203ENST00000448935 PCNX1Q96RV3 2341 aa8.77□□□□□ -1
VIPAS39-203ENST00000448935 PLCE1Q9P212 2302 aa8.77□□□□□ -1
VIPAS39-203ENST00000448935 KBTBD11-OT1A0A1B0GTJ5 212 aa8.77□□□□□ -1.01
VIPAS39-203ENST00000448935 MSGN1A6NI15 193 aa8.77□□□□□ -1.01
VIPAS39-203ENST00000448935 CGB3P0DN86 165 aa8.77□□□□□ -1.01
VIPAS39-203ENST00000448935 CGB7P0DN87 165 aa8.77□□□□□ -1.01
VIPAS39-203ENST00000448935 AKR1C2P52895 323 aa8.77□□□□□ -1.01
VIPAS39-203ENST00000448935 VAMP2P63027 116 aa8.77□□□□□ -1.01
VIPAS39-203ENST00000448935 SNTB1Q13884 538 aaKnown RBP8.77□□□□□ -1.01
VIPAS39-203ENST00000448935 MORN2Q502X0 79 aa8.77□□□□□ -1.01
VIPAS39-203ENST00000448935 PDZD9Q8IXQ8 264 aa8.77□□□□□ -1.01
VIPAS39-203ENST00000448935 MUC15Q8N387 334 aa8.77□□□□□ -1.01
VIPAS39-203ENST00000448935 OR10A7Q8NGE5 316 aa8.77□□□□□ -1.01
VIPAS39-203ENST00000448935 CD300LFQ8TDQ1 290 aa8.77□□□□□ -1.01
VIPAS39-203ENST00000448935 CCL17Q92583 94 aa8.77□□□□□ -1.01
VIPAS39-203ENST00000448935 GPHA2Q96T91 129 aa8.77□□□□□ -1.01
VIPAS39-203ENST00000448935 CCL13Q99616 98 aa8.77□□□□□ -1.01
VIPAS39-203ENST00000448935 TMEM204Q9BSN7 226 aa8.77□□□□□ -1.01
VIPAS39-203ENST00000448935 PARP12Q9H0J9 701 aaKnown RBP8.77□□□□□ -1.01
VIPAS39-203ENST00000448935 MED9Q9NWA0 146 aa8.77□□□□□ -1.01
VIPAS39-203ENST00000448935 TAS2R3Q9NYW6 316 aa8.77□□□□□ -1.01
VIPAS39-203ENST00000448935 CLN8Q9UBY8 286 aa8.77□□□□□ -1.01
VIPAS39-203ENST00000448935 GAB2Q9UQC2 676 aa8.77□□□□□ -1.01
VIPAS39-203ENST00000448935 RCL1Q9Y2P8 373 aaKnown RBP8.77□□□□□ -1.01
VIPAS39-203ENST00000448935 DSCAMO60469 2012 aa8.77□□□□□ -1.01
VIPAS39-203ENST00000448935 SPENQ96T58 3664 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms