RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 ZBTB34Q8NCN2 500 aa16.1■□□□□ 0.17
SDCBP-204ENST00000447182 C14orf144Q96I85 54 aa16.1■□□□□ 0.17
SDCBP-204ENST00000447182 TTTY12Q9BZ98 90 aa16.1■□□□□ 0.17
SDCBP-204ENST00000447182 POLDIP2Q9Y2S7 368 aa16.1■□□□□ 0.17
SDCBP-204ENST00000447182 SMCO3A2RU48 225 aa16.09■□□□□ 0.17
SDCBP-204ENST00000447182 IFNA10P01566 189 aa16.09■□□□□ 0.17
SDCBP-204ENST00000447182 P0C879 139 aa16.09■□□□□ 0.17
SDCBP-204ENST00000447182 ZNF146Q15072 292 aa16.09■□□□□ 0.17
SDCBP-204ENST00000447182 ADIRFQ15847 76 aa16.09■□□□□ 0.17
SDCBP-204ENST00000447182 BSXQ3C1V8 233 aa16.09■□□□□ 0.17
SDCBP-204ENST00000447182 C16orf82Q7Z2V1 217 aa16.09■□□□□ 0.17
SDCBP-204ENST00000447182 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.09■□□□□ 0.17
SDCBP-204ENST00000447182 WDR86Q86TI4 376 aa16.09■□□□□ 0.17
SDCBP-204ENST00000447182 RNASEH2CQ8TDP1 164 aaKnown RBP16.09■□□□□ 0.17
SDCBP-204ENST00000447182 S100PBPQ96BU1 408 aa16.09■□□□□ 0.17
SDCBP-204ENST00000447182 ARHGAP21Q5T5U3 1957 aa16.09■□□□□ 0.17
SDCBP-204ENST00000447182 KIAA2026Q5HYC2 2103 aa16.09■□□□□ 0.17
SDCBP-204ENST00000447182 CTXND1A0A1B0GTU2 59 aa16.09■□□□□ 0.17
SDCBP-204ENST00000447182 J3QW42 95 aa16.09■□□□□ 0.17
SDCBP-204ENST00000447182 CLDN1O95832 211 aa16.09■□□□□ 0.17
SDCBP-204ENST00000447182 MBP02144 154 aa16.09■□□□□ 0.17
SDCBP-204ENST00000447182 PSMB3P49720 205 aa16.09■□□□□ 0.17
SDCBP-204ENST00000447182 COA6Q5JTJ3 125 aaKnown RBP16.09■□□□□ 0.17
SDCBP-204ENST00000447182 ABHD17BQ5VST6 288 aa16.09■□□□□ 0.17
SDCBP-204ENST00000447182 ACSM6Q6P461 480 aa16.09■□□□□ 0.17
SDCBP-204ENST00000447182 SCCPDHQ8NBX0 429 aa16.09■□□□□ 0.17
SDCBP-204ENST00000447182 OR51G1Q8NGK1 321 aa16.09■□□□□ 0.17
SDCBP-204ENST00000447182 ZPBPQ9BS86 351 aa16.09■□□□□ 0.17
SDCBP-204ENST00000447182 HES7Q9BYE0 225 aa16.09■□□□□ 0.17
SDCBP-204ENST00000447182 LOXL2Q9Y4K0 774 aa16.09■□□□□ 0.17
SDCBP-204ENST00000447182 FAM166BA8MTA8 275 aa16.08■□□□□ 0.16
SDCBP-204ENST00000447182 MT-CO3P00414 261 aa16.08■□□□□ 0.16
SDCBP-204ENST00000447182 RPL23P62829 140 aaKnown RBP16.08■□□□□ 0.16
SDCBP-204ENST00000447182 MSMO1Q15800 293 aa16.08■□□□□ 0.16
SDCBP-204ENST00000447182 OR8G2PQ6IF36 304 aa16.08■□□□□ 0.16
SDCBP-204ENST00000447182 ZNF645Q8N7E2 425 aa16.08■□□□□ 0.16
SDCBP-204ENST00000447182 OR51B6Q9H340 312 aa16.08■□□□□ 0.16
SDCBP-204ENST00000447182 DVL1O14640 695 aa16.07■□□□□ 0.16
SDCBP-204ENST00000447182 IL18BPO95998 194 aa16.07■□□□□ 0.16
SDCBP-204ENST00000447182 CD55P08174 381 aa16.07■□□□□ 0.16
SDCBP-204ENST00000447182 PAX1P15863 534 aa16.07■□□□□ 0.16
SDCBP-204ENST00000447182 IL2RGP31785 369 aa16.07■□□□□ 0.16
SDCBP-204ENST00000447182 ZXDAP98168 799 aa16.07■□□□□ 0.16
SDCBP-204ENST00000447182 NANOS1Q8WY41 292 aaKnown RBP16.07■□□□□ 0.16
SDCBP-204ENST00000447182 BCL2L2Q92843 193 aaPredicted RBP16.07■□□□□ 0.16
SDCBP-204ENST00000447182 TMEM147Q9BVK8 224 aa16.07■□□□□ 0.16
SDCBP-204ENST00000447182 MANBALQ9NQG1 85 aa16.07■□□□□ 0.16
SDCBP-204ENST00000447182 TSTD3H0UI37 97 aa16.07■□□□□ 0.16
SDCBP-204ENST00000447182 SH2D1BO14796 132 aa16.07■□□□□ 0.16
SDCBP-204ENST00000447182 LY86O95711 162 aa16.07■□□□□ 0.16
SDCBP-204ENST00000447182 FAM180AQ6UWF9 173 aa16.07■□□□□ 0.16
SDCBP-204ENST00000447182 MCEMP1Q8IX19 187 aa16.07■□□□□ 0.16
SDCBP-204ENST00000447182 TMEM251Q8N6I4 163 aa16.07■□□□□ 0.16
SDCBP-204ENST00000447182 GPR87Q9BY21 358 aa16.07■□□□□ 0.16
SDCBP-204ENST00000447182 SPRY4Q9C004 299 aa16.07■□□□□ 0.16
SDCBP-204ENST00000447182 PMS2P5A8MQ11 134 aa16.06■□□□□ 0.16
SDCBP-204ENST00000447182 ACP1P24666 158 aa16.06■□□□□ 0.16
SDCBP-204ENST00000447182 DDTP30046 118 aa16.06■□□□□ 0.16
SDCBP-204ENST00000447182 JOSD1Q15040 202 aaPredicted RBP16.06■□□□□ 0.16
SDCBP-204ENST00000447182 OR1C1Q15619 314 aa16.06■□□□□ 0.16
SDCBP-204ENST00000447182 IGFBP7Q16270 282 aa16.06■□□□□ 0.16
SDCBP-204ENST00000447182 REC114Q7Z4M0 266 aa16.06■□□□□ 0.16
SDCBP-204ENST00000447182 MDP1Q86V88 176 aa16.06■□□□□ 0.16
SDCBP-204ENST00000447182 UBALD1Q8TB05 177 aa16.06■□□□□ 0.16
SDCBP-204ENST00000447182 MRPL37Q9BZE1 423 aaKnown RBP16.06■□□□□ 0.16
SDCBP-204ENST00000447182 PARLQ9H300 379 aa16.06■□□□□ 0.16
SDCBP-204ENST00000447182 TMEM265A0A087WTH1 108 aa16.06■□□□□ 0.16
SDCBP-204ENST00000447182 H7BYZ3 331 aa16.06■□□□□ 0.16
SDCBP-204ENST00000447182 COL10A1Q03692 680 aa16.06■□□□□ 0.16
SDCBP-204ENST00000447182 EIF4EBP1Q13541 118 aaPredicted RBP16.06■□□□□ 0.16
SDCBP-204ENST00000447182 SPATA46Q5T0L3 261 aa16.06■□□□□ 0.16
SDCBP-204ENST00000447182 OR1P1Q8NH06 330 aa16.06■□□□□ 0.16
SDCBP-204ENST00000447182 RHOVQ96L33 236 aa16.06■□□□□ 0.16
SDCBP-204ENST00000447182 OR5B12Q96R08 314 aa16.06■□□□□ 0.16
SDCBP-204ENST00000447182 UFSP2Q9NUQ7 469 aa16.06■□□□□ 0.16
SDCBP-204ENST00000447182 LRRC30A6NM36 301 aa16.05■□□□□ 0.16
SDCBP-204ENST00000447182 MDKP21741 143 aaPredicted RBP16.05■□□□□ 0.16
SDCBP-204ENST00000447182 GALR1P47211 349 aa16.05■□□□□ 0.16
SDCBP-204ENST00000447182 UBALD2Q8IYN6 164 aa16.05■□□□□ 0.16
SDCBP-204ENST00000447182 RPUSD4Q96CM3 377 aaKnown RBP16.05■□□□□ 0.16
SDCBP-204ENST00000447182 ANAPC16Q96DE5 110 aa16.05■□□□□ 0.16
SDCBP-204ENST00000447182 SLC25A22Q9H936 323 aa16.05■□□□□ 0.16
SDCBP-204ENST00000447182 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.05■□□□□ 0.16
SDCBP-204ENST00000447182 ABI3Q9P2A4 366 aa16.05■□□□□ 0.16
SDCBP-204ENST00000447182 GAB2Q9UQC2 676 aa16.05■□□□□ 0.16
SDCBP-204ENST00000447182 DNAJC13O75165 2243 aa16.05■□□□□ 0.16
SDCBP-204ENST00000447182 RAMP3O60896 148 aa16.04■□□□□ 0.16
SDCBP-204ENST00000447182 NXPH2O95156 264 aa16.04■□□□□ 0.16
SDCBP-204ENST00000447182 AMBPP02760 352 aa16.04■□□□□ 0.16
SDCBP-204ENST00000447182 FAM3BP58499 235 aaPredicted RBP16.04■□□□□ 0.16
SDCBP-204ENST00000447182 OR10G9Q8NGN4 311 aa16.04■□□□□ 0.16
SDCBP-204ENST00000447182 OR10G7Q8NGN6 311 aa16.04■□□□□ 0.16
SDCBP-204ENST00000447182 ACTR3CQ9C0K3 210 aaPredicted RBP16.04■□□□□ 0.16
SDCBP-204ENST00000447182 LAMP3Q9UQV4 416 aa16.04■□□□□ 0.16
SDCBP-204ENST00000447182 DOCK7Q96N67 2140 aa16.04■□□□□ 0.16
SDCBP-204ENST00000447182 PPP5D1E7EU14 171 aa16.04■□□□□ 0.16
SDCBP-204ENST00000447182 HRASP01112 189 aa16.04■□□□□ 0.16
SDCBP-204ENST00000447182 GZMHP20718 246 aa16.04■□□□□ 0.16
SDCBP-204ENST00000447182 TBC1D28Q2M2D7 210 aa16.04■□□□□ 0.16
SDCBP-204ENST00000447182 VWC2Q2TAL6 325 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms